Salvelinus fontinalis (brook trout): 129831957
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Entry
129831957 CDS
T11136
Name
(RefSeq) neural cell adhesion molecule 1-like isoform X1
KO
K06491
neural cell adhesion molecule
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sfon04514
Cell adhesion molecule (CAM) interaction
sfon04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
129831957
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129831957
04517 IgSF CAM signaling
129831957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129831957
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129831957
04090 CD molecules [BR:
sfon04090
]
129831957
00536 Glycosaminoglycan binding proteins [BR:
sfon00536
]
129831957
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sfon00537
]
129831957
04091 Lectins [BR:
sfon04091
]
129831957
Membrane trafficking [BR:
sfon04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
129831957
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
NCAM1/2
129831957
CD molecules [BR:
sfon04090
]
Proteins
129831957
Glycosaminoglycan binding proteins [BR:
sfon00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
129831957
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sfon00537
]
Others
129831957
Lectins [BR:
sfon04091
]
I-type lectins (Siglecs)
129831957
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
V-set
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Ig_PDGFR_d4
V-set_CD47
C2-set_2
Fn3_ROS1
C1-set
C2-set_3
Motif
Other DBs
NCBI-GeneID:
129831957
NCBI-ProteinID:
XP_055751594
LinkDB
All DBs
Position
33:28975300..29075629
Genome browser
AA seq
1287 aa
AA seq
DB search
MLHAKDIILALLLVGSTVCLEVEITPTQGEISVGESKFFLCEIVGVAKEIDWYSPSGEKI
EPNKPEITVTRNDESSSTLTLYKAGVDSAGTYKCLATNGDQSAEATVNVKFYQRIIFKNA
PSPQEFNEGDNANIICDVISSPPPTIIWKHKGAKIQMEKDVRFKILPNNHLQIRGIKKTD
EGSYTCEGRLMARGEIDLKIIRVIVNVLPTIRVWQSEVNATAGVGQSAMLTCAADGYPEP
MVTWARASVLLESGDKYSFNEDGSEMTIMEVAKLDEGEYTCIAKNKAGESEQEVSLRVFV
KPKITFLLNQSTSEMEEQVTLTCEASGDPTPTINWSFGLRPFTEGEQAHLNRIYQASWTR
PEQHKSLDGNVVVRSDARVSSLTLKYAKFTDAGQYLCSARNAIGVDSQPAYLEVRYAPKI
QGSVTVYTWEGNAANISCEVLAHPSDVSMLWLRDGFQLPNANVTKAKVFQSPTASYLEVT
PESENDFGSYNCTAANEMGTESKEFLLIQADVPSAPSLGEVEPFSSSARVEFQEPDATGG
VPVLRYRAEWKTVGRGSWVQRVYDVQGGALSEVTITGLKPETNYEVKMSAINGKGEGETS
PAVVFKTEPVREPEPPKLEGTLQTKGNSLKVNWLKQDDGGSPITHYLVRYKPKHQADWKP
EIQLPSGSENVVLSGLEWNTEYNVFVVAENQQGKSQPGTLTFRTSPEPAAIPDIDGESAL
STGIMAGILILAFVLLLLAVDVTCYFTNKCGLIMCLCGKPGSRAKGHNLEQGKAAFIKDE
SKEPIVEVRTEDECTANHNAGGPTEPSETTPLTEPELAAHTAALALDTLSSVATISDTAN
TTYDPTQDSPSSESTALNCSLSALATDPLPAPAPAPTPESNTAPSTPFISTSDITARVAP
LLDLLGDSSPRAEDKMYATAVSATDSPKSPKKSPIPIPSRRRNSNRPAPSPPTPKSPTPT
HSTPSPTVAPRKSAPESPSLAPSTASPSPNTRKAAPIAPDSPSHAPTAFTFPASDTSTSK
LAPTATSTVTPVPGTPVPGTPTVLGSSTPVPVPDPDKPDSTTKDTPTPAPNIDPTPTTTS
VPSAPTTAFNADITAAIVHEDTSKCAPVFPHILTSIPAPTSATTTPAPNAFTAPSFATPA
APTVTITPASTIYDTPTPTLTHHMPTTTAPQAPEIELELTNGVETESPSLPPAEPTRFQS
SPTPSPAPGLSSSSSPLANGNGFGADLQASSPPALEELDSLAKAAPLNDEKIFGGEKSKA
EEVKTALSEVTTEHNNVTQTNASDSKA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgctccacgcaaaggatatcattttagccttgcttctcgtgggctctacagtttgtctg
gaagtggagatcacacccacccagggagagatcagtgtcggagagtccaagttctttctg
tgtgaaattgttggggtagcaaaggagattgactggtattcgccgagcggggagaagata
gagcccaacaaaccagagatcaccgtaacccgaaacgacgagtcctcgtccaccctcaca
ctctacaaggccggggtagacagcgctggaacctacaagtgtctggccaccaacggagac
cagtcagcagaagccaccgtcaacgtcaagttctaccaaaggatcatcttcaagaatgcc
ccctccccccaagagttcaatgaaggggacaacgccaacatcatctgtgacgtcatcagc
tcccctccccccaccatcatctggaaacacaaaggagctaagattcagatggagaaggat
gtccgctttaagatcctgcccaacaaccacctgcagatccgaggcatcaagaagacagac
gaggggtcgtacacctgtgagggccgcctcatggcccggggagagattgacctcaagatc
attagggtcatcgtcaacgtgctccctaccatccgggtgtggcagtcggaggtgaatgcc
acagcaggcgtgggccagtctgccatgttgacctgtgcagctgatggatacccagagccc
atggtgacctgggcacgggccagtgttcttctggagtcaggagacaagtacagctttaat
gaggacggttcagagatgaccatcatggaggtggccaaactggatgagggagagtacacc
tgcatcgctaagaacaaggctggggagagcgaacaggaagtcagccttagagtgtttgtg
aaacctaagatcaccttcctgctgaaccagagcacgtctgagatggaggagcaggtgact
ctgacctgtgaggcgtcaggggaccccacccccaccatcaactggagctttggcctgcgc
cccttcactgagggagagcaggcacatctaaacaggatctatcaggcctcttggactcgg
cccgagcaacacaagagtctggatgggaacgtcgtagtgaggagtgatgcgcgtgtgtcc
tccctcacgctgaagtacgccaagttcaccgacgctggccagtacctctgctctgcacgc
aacgccatcggagtggattctcaacccgcctacctggaagtccgctatgctcctaagatc
cagggctcagtgacagtgtatacctgggaggggaatgcagctaacatcagctgtgaggtc
ctggcccaccccagtgatgtgtccatgctgtggctgagggacgggtttcagcttcccaac
gctaacgtcaccaaagccaaggttttccagagccccacagccagctacctggaggtgact
ccagagtctgagaatgactttgggagctacaactgtactgctgccaatgagatgggcaca
gaatccaaggagttcctcctcattcaggctgatgtcccgtcagccccatccctcggggag
gtggagccgttctccagctcagccagggtggagttccaggagcctgacgccactgggggt
gtacccgtcctccggtaccgggccgagtggaagactgtgggcaggggcagctgggtgcag
agggtctatgacgtccaaggaggagctctgagtgaagtaaccatcacaggcctgaagcct
gagaccaactatgaggtgaagatgtcagccattaacggcaagggagagggtgaaactagc
cccgctgtggtcttcaagacagagcctgtccgtgaacctgaaccgcctaagctggaggga
acactccaaacaaaaggcaactccctcaaagtcaactggctcaagcaggacgatggaggc
tcacccatcacacactacctagtccgctataaaccaaagcaccaggccgactggaagcca
gagatccagctacccagtggcagtgagaatgtggttctgagcggactggagtggaacacg
gagtacaatgtgtttgtggtggcagagaaccagcaggggaagtcccaacctggaaccctg
accttcagaacctctccagaacccgctgccatcccagatatagacggtgagtctgccctc
tccacgggcatcatggcagggatcctcatcttggccttcgtcctgctgctcctggctgtg
gacgtcacctgctacttcaccaacaagtgtggcctcatcatgtgtctgtgtggcaagcca
ggcagcagggccaagggacacaacctagaacagggcaaggctgcattcataaaggatgag
tccaaagaaccgatagtggaggtgaggacagaggatgagtgcacagccaatcacaatgca
ggaggacccacggaacccagtgagaccacaccccttacagagccagagctggccgctcac
actgctgccctggctctggacaccctctcgtctgtagccaccatctctgacacagccaac
acaacctatgaccccacccaggacagcccctctagtgagagcaccgctctcaactgtagc
ctgtctgccctcgctactgaccccctgcctgcccccgccccggcacccacaccagagtcc
aacacagccccctcaacccccttcatctccacctctgacatcacagctagagtagccccc
ctgttagaccttctaggagacagctctcctagagcagaggacaaaatgtatgccactgct
gttagtgccacagatagccctaaatctcctaaaaagtcccctattccaataccctctagg
cgtcgaaactctaacagacctgctccttctcctcccactcccaagagccccacacctacc
cactccaccccctctcctacagtggcccccaggaaatctgccccggaaagtccctctctt
gccccctccactgcctctcctagtccaaacaccaggaaagctgctcctattgccccagac
agcccctctcatgctcctacggcgttcactttcccagcctctgacacctccacctctaaa
cttgcacctactgccaccagcactgttacccctgtccctggtacccctgtccctggtacc
cctactgtcctgggttctagtacaccagtcccagtccctgaccctgacaaacctgactct
actaccaaagacactcccactcctgcccctaatatagaccccactcccactaccacatct
gtccctagtgctcctactactgccttcaatgctgacataactgctgctatcgttcacgag
gacacaagcaaatgtgcccctgttttcccacacattctcactagtattccagctcccaca
agtgccaccaccacacctgcccctaatgctttcactgccccaagttttgccacacctgct
gcccccacggtcactatcacaccggcttctactatctacgacaccccaacacccaccctg
acccaccacatgcccaccaccacagcaccccaagccccagagatagagttagagttgacc
aatggggtggagactgagagcccctccctgcccccagcagagcccactaggtttcagagt
agtcccactccctcccctgcccctggcctttcctcgtcctcctcccccctggctaacgga
aacgggtttggggcagacctccaggcctcaagccccccagctctggaggagttagacagt
ctggccaaggctgctccactcaacgacgagaagatatttggaggtgagaagagtaaagcg
gaggaggtgaagacagccctgtcagaggtgaccacagaacacaacaatgtcacacagaca
aacgccagcgacagcaaagcatga
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integrated database retrieval system
