Salvelinus fontinalis (brook trout): 129832001
Help
Entry
129832001 CDS
T11136
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A-like isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129832001
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129832001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
129832001
NCBI-ProteinID:
XP_055751676
LinkDB
All DBs
Position
33:30756155..30776363
Genome browser
AA seq
581 aa
AA seq
DB search
MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPNGFGVKLENLHMSPPSSKI
NGNDSDSKPVFLTLCNGHGKGKLSGDEGSEDGDDFDTPPILKELQSLNTEEAAEQRAEVD
RILAEDPWRAARIIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTW
YVRKQREVLRQFNQAVQGSVSNMTDKGSQDQVLFFFPEFNPPGQGMGQQGEEVGSEPSCK
KMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSN
LVTEVRVYNWFANRRKEEAFRQKLAMDAYPIPIHSMNPLLSHSHSSPHHHSSQTSASPPS
KMQVRYSQQGPSEVSSSTTISHHGSMSTSQSVLQQVSPGGLDPSHSLLSPDAKMMSASGG
GLPPVSTLTNIHNSHHTHQQTQNLIMPLSGVMTIAQSLNTSQSQSVPVINSVAGSLAALQ
PVQFSQQLHSPHQHGLMQQSPSQQPFMATVTHSHSQYLPLMYPHKQEPTQYSHQSRFPSA
MVVTDANSLSTLSSMSSSKQDSTVNKMVQLGGLSWCPLQAW
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgaaaatggtgtccaagttgacatctctccaacaggagctcttgagcgccttg
ttagattccggagttaccaaagatgttctgatccaagcgttggacgatatggatcctagc
ccgaatggctttggagttaagttggagaatctacacatgtctccgccaagttcgaaaatc
aacggaaatgattcggattcgaagccggtatttcttacgttgtgcaacgggcacggtaag
ggcaaactgtcgggagacgaggggtccgaggacggagatgatttcgataccccaccgata
ctaaaagaactccagtcgcttaacacggaggaagcagcggagcagagggcagaagttgac
cgaatattagctgaggacccgtggcgtgccgcccgcataatcaaaggctacatgcaacag
cacaacataccacagcgcgaggtggtggacgtaaccggactaaatcagtctcacctctca
cagcacctcaacaaaggcacgcccatgaaaactcagaagcgagcggcgctctacacctgg
tatgtcaggaaacagcgggaagttctcagacaattcaaccaggcagtgcaaggttctgtc
agcaatatgactgacaaaggcagtcaggatcaggtgctgtttttcttcccagagttcaac
cctcctggtcagggtatggggcagcaaggggaggaggtgggctctgaaccttcctgcaag
aaaatgagacggaaccgtttcaaatgggggcctgcatcccaacagatcctctaccaggcc
tatgaaagacagaagaaccccagcaaagaggagcgggaggctctggtggaggagtgcaac
agggctgagtgtctccagagaggggtgtctccatctaaagctcatgggctgggctctaac
ctggtcactgaggtacgggtctataactggtttgccaaccggcgtaaggaagaggccttc
cgtcagaagctggcaatggacgcctaccccatacccatccacagcatgaaccctctcctg
tctcacagccacagctctccacaccaccacagctcccagaccagcgcatccccccctagt
aagatgcaagtgcggtacagccaacaaggacccagtgaggtcagctcctcgacgaccatc
agccaccatggcagcatgtcgaccagccagtcggtgttacagcaggtgtctccgggcggc
ttggaccccagccacagtctgctgtcacctgatgccaagatgatgtctgcgtcaggtgga
ggcctgccacctgtgagcacgctgaccaacatccacaactcccaccacacacaccagcag
acacagaacctcatcatgcctctctctggagtcatgaccatcgcacagagtctgaacacg
tcgcagtctcagtcggtgccagtgatcaacagcgtggcggggagccttgcagcgctgcaa
ccggtgcagttctcccagcagctccacagtccccaccagcatggcctgatgcagcagtcc
cccagccagcagcccttcatggccaccgtgactcactcacacagtcagtacctgcctctt
atgtaccctcacaagcaggagcccacgcagtattcccaccagtcacggtttccctcagcc
atggtggtgacagacgccaacagcctcagtactctcagctccatgtcatccagcaaacaa
gattctaccgtaaacaagatggtgcaactggggggtctctcctggtgtcctcttcaagcc
tggtga
DBGET
integrated database retrieval system
