Salvelinus fontinalis (brook trout): 129832251
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Entry
129832251 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
sfon04137
Mitophagy - animal
sfon04144
Endocytosis
sfon04340
Hedgehog signaling pathway
sfon04350
TGF-beta signaling pathway
sfon04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129832251
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129832251
04350 TGF-beta signaling pathway
129832251
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129832251
04137 Mitophagy - animal
129832251
09144 Cellular community - eukaryotes
04520 Adherens junction
129832251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129832251
04121 Ubiquitin system [BR:
sfon04121
]
129832251
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129832251
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129832251
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129832251
Autophagy
Mitophagy
Other mitophagy associated proteins
129832251
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
HECT type E3
129832251
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129832251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129832251
NCBI-ProteinID:
XP_055752159
LinkDB
All DBs
Position
2:complement(94382823..94480683)
Genome browser
AA seq
727 aa
AA seq
DB search
MSGPGVRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKRQGAGFLGCIRLLANSISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDGLGSGGPVVDCRGLLENEGPVFESCFSEEPLPYSDATGA
AGGGTCPPDSPNQENRLQAQRIRGQDSQRHTHTPQNRLHGNQSPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLTSVSCEELGPLPSGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHSIISHHSQVKESSQPLGGGGGREMEEGGEEGGEGEVTLRYERDLVHKLKLLRHELS
LQQPQAGHCRIEVSRDEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYL
LCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHSHYINGGF
TLPFYKQLLGKPITLQDLETTDPELHKSLVWILENDISSVLDHTFCVEHSAFGKFLQHEL
KPNGQNLPVTEDNKKEYVKLYVTWRFMRGIEAQFLALQKGFSQLIPQHLLKPFDHKELEL
IIGGLGKIDLADWKSNTRLKHCAVDSNVVCWFWEAVESFTEERRGRLLQFVTGSTRVPLQ
GFKALQGSTGSAGPRLFTIHLIEANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEE
TCGFAVE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcctggggttcgaaggaacggctccagcatcaaaatccgcctgacagtctta
tgtgccaagaaccttgcaaagaaagactttttccggttgccggacccatttgcgaaggta
gtggtggatggatcaggacagtgtcattctacagacacagtgaagagcaccctggacccc
aaatggaaccaacactatgacctgtacatagggaagacagactccatcaccatcagtgtg
tggaaccataagaagatccacaagaggcaaggggccgggttcctgggctgtatacgactg
ctggctaactccatcagcagactgaaagacacaggctaccagcggttggatctgtgtaag
ctgaatccatcagacagtgatgcagtacggggacagatcgtagtgagcctccagaccaga
gatggtttgggcagtggaggacccgtggtcgactgtagaggactgttggagaatgagggg
cctgtgtttgagagctgtttcagtgaggagccgctgccgtactcagacgccacgggcgcc
gctgggggcgggacctgtccaccggattcacccaaccaggagaaccggctccaggctcag
cgaatcagaggccaggattcccaaagacacacccacacccctcagaaccgactgcatggc
aaccaatcacctgatctgcctgagggatacgagcagcgcaccacagtgcagggacaggtg
tattttcttcacacacagacgggagtcagcacctggcatgacccacgcatacccagggac
ctgaccagtgtgagctgtgaggagttgggtccgctaccgtccggctgggaggtgaggagc
acggtgtcgggacggatctactttgtggatcacaacaaccgaacaacacagttcactgac
ccccggctgcacagcatcatcagccaccactcccaggtgaaggagtcgtctcagcccctg
ggtgggggaggcgggagagagatggaggagggaggcgaggagggaggagaaggggaggtg
acactgcgttatgagagagacctggtccacaaactgaagctgctccgacacgagctgtcg
ctacagcaaccacaggccggacactgtcgcatagaggtgtcacgagacgagatctttgag
gagtcttatcgtcagatcatgaagatgaggcccaaggatctgaagaagcgtctgatggtg
aagtttagaggagaggaaggactggactacggaggagtggcaagggagtggctgtacctg
ctatgccatgagatgttaaacccgtactacggcctgttccagtactcaacagacaacatt
tacacactacagatcaaccctgactcctctatcaaccctgaccacctgtcgtatttccac
tttgtgggtcgtgtgatgggcctggccgtgttccatagtcactatatcaacggaggcttc
accctgcccttctacaagcagctgctggggaaacctattacgctacaagacctggagacc
actgaccctgaactacacaagagtctggtctggatactggagaacgacatctcgtcggtt
ctagatcatacgttctgcgtggaacacagtgccttcggcaagttccttcaacatgagctg
aaacccaacggccagaacctcccggtaaccgaggacaacaagaaggagtacgtgaagctg
tacgtcacctggaggtttatgagggggatcgaggctcagttcttagctctgcagaaagga
ttcagccaactgattcctcagcacctcctcaaaccgtttgaccacaaggagctggagttg
atcatcggaggcctggggaagatagacctggcagattggaagtctaacacccgtttgaag
cactgtgctgtagacagtaatgtggtttgctggttctgggaggcggtagagagcttcact
gaggagaggagaggacgactactgcagtttgttaccggttctaccagagttccactacag
gggttcaaggcactacagggttctacaggttcagcaggcccaaggctgttcaccatccat
ctgatagaagccaacacagacaacctacccaaggcacacacatgttttaacagaatagat
atccctccctacgagtcgtacgagaaactttatgagaagctgctgacggccgtggaggag
acgtgtggcttcgctgtggagtga
DBGET
integrated database retrieval system
