Salvelinus fontinalis (brook trout): 129832280
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Entry
129832280 CDS
T11136
Name
(RefSeq) gem-associated protein 4-like
KO
K13132
gem associated protein 4
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129832280
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
129832280
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Edg1
Motif
Other DBs
NCBI-GeneID:
129832280
NCBI-ProteinID:
XP_055752195
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All DBs
Position
33:complement(40768028..40774736)
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AA seq
1077 aa
AA seq
DB search
MNQDSWLSCEKTAVLQGGFLLANRLCQPASLSALQKEDWSKVGHPILQAVREICGQERGS
CLSSVRWKKKIICVLWSKLLGRESEEDMEIGWRENPFFSLQNSLPDINRTVMFELVKLKG
FSQIYAQLLLCLPSSHLSSELEKLVQHVTRNSTEEDVRVLLEVWWELWKGRGGRQEEDDL
DKVFTNQWTRLTNTTGLSPQAAKRFKSDPDTPTSPPSTTDVLSILFHALGEMKEHLSTSD
LCYRALSNCLDSLYTSHLIDQAIILPAEVQLQSLTSTVIVRKRHAEIEKFDLVQVISEAH
SDLKAAHTPSQFKPCGMTLMQALQTVSQLTQAWEKRGLLEMTDSGDPGVLALRLKSCLAR
VLESLEERSMSETMDEGERQTLNNVQSTFRGLLGSLSFPDTEHNTGEMAHIAVAIINHRL
EGFQDFTLLFATELSWSLSMEEWISCLERNKTAFQRKDIVMKLVSTLMTKCQIDTEEVEH
CRKLKDIIVNIFTELPLAEKNTTLAEMLTCSKKGLQGSLPLAVTEGFSEELNMAFNCIIQ
GGAAQNNLSLAVAAIARVAFQNPEATLRRCCHLAVVNHGAHSLLSKILQQLSGLRGGAPG
CTEGTGSLLCSCLQDTAMTKLSSAKEEDQFLHFLVALMQPIISESGQSFLHPEEVVCAFV
LPHLSPSSGSSTCSLELCLRLLHSAFSLDFQDASPHWVMNCSPFPLLCVLCQILNEGGRC
WELPAEGAPRHLSMESKVLLVTVLTALGKVVGREVASAPNTWSRALFWLYNKVEALDWTV
RFHLKVVWGDHFKNEVPFSLLAVCELPEQEWSGLKLAQYGQGTGLLVWMECCAVSDEIQD
IMLTSLVLDQHRPDDVNMFSKGLLVAVTQTLPWCTITEWGRLLRAMRELLRSGRLHVPYS
LEYVDFLPLLDLRAFSCELGLSVLLLRVLQLLCGSSCKDWLPGQGWAHVGRLYASAMREV
IDSLRGKLSQSPSNKDPKERAAMTTASQEVLFVLSQLFCHVQHIQVMMPGGQCESLFLCA
LEILTHYEAVLAAHPSSSSHLETENTRHFFTTITDNLDSAEMKAVLHQKIAQLSSTG
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagattcctggctgagctgtgagaagactgccgttctccagggaggctttctg
ttggccaacagattgtgccagccagcgtcactcagtgccctacagaaggaggactggagt
aaggttggccacccaattctacaggctgtcagagaaatctgtgggcaggagcgaggtagc
tgtctgagcagtgtccgctggaagaagaaaatcatctgcgtcttatggagcaaattactg
gggcgggagagcgaagaggacatggaaatcggctggagggagaatccattcttctctctg
cagaacagtctacctgacattaaccgaacagtgatgtttgagctggtcaagttgaaaggc
ttctctcagatctacgcccagctgcttttgtgtctgccatcgtcccacctgagttctgag
ctagagaagctagttcaacacgttacccgaaacagcactgaggaggacgtccgcgtcctg
ctggaggtgtggtgggagctgtggaagggcagggggggaaggcaagaggaggacgacctc
gataaggtctttactaaccagtggacccgcctcaccaacaccactggcctctcacctcag
gctgccaagagattcaagtcagacccagataccccaacatcaccaccatccaccactgat
gtgctgtccattctttttcatgctctgggggagatgaaagagcatctgagcacctctgac
ctttgctaccgtgccctatccaactgcctcgactccctgtacacctcgcatctgatagac
caagctatcatcctcccagctgaggtgcaacttcagagcctgaccagtacggtgattgtc
agaaagaggcatgctgagatagagaagtttgatctggtccaggtgataagcgaggcccac
agtgacctgaaggcagcccacacaccctcccagtttaaaccctgtggaatgacactaatg
caagccctgcagactgtctcacagctcactcaggcctgggagaagagagggctgctggag
atgacagacagtggtgaccccggcgtcttggcactccgtcttaaaagctgtctggccaga
gtgctcgagtccctagaggaacggtccatgtctgagaccatggatgagggtgagcgccag
acactgaacaatgtgcaaagcacttttagaggcttgttaggctcactgtccttccccgac
acagagcacaacactggggaaatggcccacattgccgtagccatcattaaccaccgcttg
gagggcttccaagatttcactctgctatttgccactgaactgagctggtccctgagcatg
gaggagtggatcagctgtctggagagaaacaaaaccgcattccagcgaaaggacattgtc
atgaaattagtctccactctcatgacaaagtgccaaatagatactgaagaagtagagcac
tgcagaaagctgaaggacattattgtgaacattttcacagagctccccttagctgagaaa
aacacaacgttagcggaaatgctaacctgctccaagaagggtctccagggctctctgccc
ctggctgtgacggagggctttagtgaggagctcaacatggcgttcaactgcatcatccag
gggggagcggcgcagaacaacctcagcttggccgtggccgccatagcccgcgtggccttt
cagaaccccgaggccaccctgcgtcggtgctgccatctagcggtggtgaaccatggggcc
cacagcctcctctccaagatactccagcagctctcagggctgaggggcggtgctcccggt
tgcacagaggggacggggagcttactgtgcagctgtcttcaagatactgccatgactaaa
ctgtcctccgctaaggaggaggaccagttcctgcacttcctggttgcactgatgcagccg
atcatttccgagagcggacagagtttcctgcaccctgaagaggttgtgtgtgccttcgtc
ctgcctcacctctccccctcctccggctctagcacctgcagcctggagctgtgcctgcgt
ttgctccactctgcattttctctggatttccaggatgcatctccacactgggtcatgaac
tgctccccgttccccctcctctgcgtcctctgccagattctgaacgagggcggcaggtgc
tgggagcttcctgcagagggcgcaccacgtcacttatccatggagtccaaggtgctgctc
gtcacagtgctgactgcattgggcaaggtggtgggacgggaggtggcttcagcccccaac
acctggtccagagccctcttctggctctacaataaagtggaggccctggactggactgtt
cgcttccacctgaaggtagtgtggggggatcacttcaaaaacgaggtgccattctcactg
ttggctgtgtgcgagctgccggagcaggagtggtctggcctaaagttggcccagtatggg
cagggcacagggctgctggtgtggatggagtgctgtgccgtctctgacgagattcaggac
atcatgctgacctctctggttctggaccagcaccggcccgacgacgtcaacatgttcagc
aaaggcctgctggtggccgtgacgcagaccctaccctggtgcaccatcaccgagtggggc
aggctgctgagagccatgcgagagttgctccgctcaggccgtctccacgtgccttactct
ctggagtacgtggactttctccccctgctggacctgcgggccttctcctgcgagctgggt
ctgtccgtgctactgctgcgtgtcctccagctgctctgtggctccagctgcaaagactgg
ctgcctggccagggctgggcccatgtgggacggctgtacgccagcgccatgagagaggtc
atagactccctgaggggaaagctgtcacagtctccctccaacaaagacccaaaagagagg
gcagctatgaccactgccagccaggaggtgctgtttgtactgagccagctcttctgccat
gtgcagcacattcaggtgatgatgcccggcgggcagtgcgagtccctgttcctgtgtgca
ctggagatcctgacccactacgaggcagtgctggccgcacaccccagcagcagctcgcac
ctggagaccgagaacactcgccacttcttcaccaccatcacagacaacctggacagcgcc
gagatgaaggctgtgttgcatcagaaaattgctcagctgtcgtcaacaggttga
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