Salvelinus fontinalis (brook trout): 129832422
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Entry
129832422 CDS
T11136
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129832422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129832422
Spliceosome [BR:
sfon03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
129832422
Complex B
129832422
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
129832422
NCBI-ProteinID:
XP_055752449
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Position
33:complement(47035106..47037889)
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AA seq
281 aa
AA seq
DB search
MAAPDMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARSLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIGYAKGDSDIIAKMKGTYVERDRKKEKRAKVKGPEAA
GAKKGVPGTPVVPMGPGVPTPMPGMPPMSGAPRMMQMPGQPPYMPPPGMMPPPGMGPGGM
PPGAMPPGGMMPGQMPHAQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP
GRHDIAFVEFDNDVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggatatgcgtctcaaccacaccatatacatcaacaacctaaacgagaag
attaaaaaagatgaactgaagaagtcgttgtacgccattttctctcagtttggtcaaatc
ctagacattttggttgcccgctccctgaagatgaggggtcaggcctttgtcatcttcaag
gaggtcaacagcgcctccaatgccctgcgttccatgcaggggttcccattctatgacaaa
cctatgcgtattgggtacgccaaaggggattctgacatcatcgctaaaatgaagggcacc
tatgtggagcgcgaccgtaagaaggagaagagggccaaggtcaagggcccagaggctgca
ggggccaagaagggtgtgccaggaacccctgtagtacctatgggcccaggagttccaaca
cccatgcctggaatgccacccatgagcggggctcctcgtatgatgcaaatgccagggcag
cccccttacatgcccccgccaggcatgatgccacctcctgggatgggccctggagggatg
ccccctggtgccatgcctccgggtgggatgatgccagggcaaatgccccacgcccaggtt
gcagaaaaccctcccaaccacatccttttcctcaccaacctcccagaggagaccaacgag
ctcatgctgtctatgctcttcaaccagttccctgggttcaaagaggtgcgtctggtacct
ggtcgccacgacattgcctttgtagagtttgataatgacgtgcaggctggagcggccagg
gaggcactacagggcttcaagatcacccagaccaacgccatgaagatctcattcgccaag
aaataa
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