Salvelinus fontinalis (brook trout): 129832432
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Entry
129832432 CDS
T11136
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04270
Vascular smooth muscle contraction
sfon04625
C-type lectin receptor signaling pathway
sfon04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129832432
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129832432
09153 Circulatory system
04270 Vascular smooth muscle contraction
129832432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129832432
Membrane trafficking [BR:
sfon04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129832432
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129832432
NCBI-ProteinID:
XP_055752466
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Position
33:complement(48024825..48102563)
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AA seq
1467 aa
AA seq
DB search
MSDTQSSITDRFPNKANRSSSILSKDHPPDKKPKSDKPAVSASHEFDPTDVLVQKSDCVL
AEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAERAGVQTGDRIIKVN
GTLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLLEGEAKVVFLGSHTGSSSVTSP
NSPGQPMGERPYSPHDRITSPLPIWEENNSVHNQKVHILQKMLSKEQEDLQAMKEEYSRN
PTPKLLKDIQEAKKHIPQLQGQLSKATGGAQDALRLGDGDDGSILDIDHTPSSSSNDLSW
SSSMMSPVLRGFASASPESLCQRDLLSYHSPKSTPRDSFNSCHSPDPEDTPDLDSLSPSN
VSSPSSSRFVSQIIGAEDDYFDSDQEQVNGQCSCFQSMELLKSRPAHLAAFLHHVVSQFD
PAPLLCYLYADLCKQTNSKETRRVFMDFHNFFIDRGANLKVAVPESLSSDLDRRRTELIP
EELNRQYVQMVQDTQLPDIQRNLEDFRQKRSMGLTLAEGELARLDTERVRDRVALERERA
CAENIITKIEDVLLTTQSTEEEKCTTMQYVILTYMKHLGVKVKEPRGLESKWVRINFLPK
MKKSIKPEKEGGEEKVKRTRFPSILGPPRRPSRVDPTSVGKAMDLNKPRPQKQLSQPSLG
ALEHLEAGRLRASQSSEGSELIHSSSTNATSPTNSTTNNNASDGGSRDSEFVGTPNSAFP
KLSEGLGDLDSLEYTPNTHFDYNLSPYSLDQLQEEDRESGVLEGTPKAIRRLDGLGSTEV
QSEDDQGGTDSEHDPLNWQQLVGREVLAGLQPHEIKRQEVINELFYTERAHLRMLKVLDN
IFYQKLTREAILPPADIKNIFTNLGDIVQLHVWISEQMVAIRKRNETSVIDQIGDDLLSW
FSRGEEEKIKQAVGTFCSNQPFALELIKSRQKKDSRFTSFMQEAESNRLCRRLQLKDIIP
VEMQRLTKYPLLLENIAKYTDDSVEKDKVKKAGDCCRKILNHVNQAVKESENKQRLEDYQ
RRLDLSSLKQTENPVISELKNLDLTKKKLVHEGPLSWKVNKDKTIELYTLLLEDILVLLQ
KQDERLILKCHSKNLSGTADTKHIFSPIIKLNAVLVRSVATDNKSFFVLSMSDNGAQIYE
LMAQTVSEQRMWQRQITQRADAMKVNPNSAIPLPQTDGERDGVEIITADVARLGKDQDRI
SSGSSQSIEGCAASGGEMQTSLPDAKPFQGLKPEEEEPNREEGLYGDPDLADRLPFRMAI
DGLSESDGLGFSPSRADDALKTLSALKQVLVTQLMSQDEGAGRSSSGGGRLLRTTSLRTP
VDSRARVAVQNGSGRCTQASHPEDPAQDLVSGDTGFFESPEDYAGYLVLEGYGGSGESST
DDDLQATGKQLSASRGCGAGDSGISLRFSSASQAGSISSFSRQVLSHIRNLQTNLNHLKE
VEAKYHSLLRQRPARSSTDMDDNKDKR
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacagtccagtatcactgataggtttcccaataaagcaaacagaagcagt
agcattctcagtaaggaccacccccctgacaagaaacccaaaagtgataaaccggcagtc
tccgcttcacatgagtttgaccctacagacgttctggtgcagaagagtgactgtgttcta
gcggagggaaagcccgagtcctgtgggcttgtccagcgatgtgtgatcattcagaaagat
gagaatggctttgggctgacggtgagcggagacaaccctgtgtttgtgcagctcgtcaag
gaggatggcgctgcagagcgtgcaggtgtacagacaggtgacaggatcatcaaggtgaac
gggaccctagtaacacattcgaaccacgtggaagtagtaaagcttataaaatcgggctcc
tatgtggccctcacagtgttggggcgaccccctgggttgccccagatccccctgttggag
ggcgaggctaaggtggtgttcctggggtcccatacagggtcgtcctctgtcacctctcca
aattcccctggacagccaatgggggagagaccatacagcccccatgaccgcatcacctct
cctctaccgatatgggaagagaacaacagcgtacacaaccaaaaggtgcacattctgcag
aagatgttgtccaaagagcaagaagatttgcaggcaatgaaggaggagtacagcaggaat
ccgacgcccaaactactgaaggacatccaggaagccaagaagcacattccacagctgcag
gggcagcttagtaaggccactgggggagcacaggatgccctgcgattgggtgatggagat
gatggaagcattttggacatagaccacacaccttcctccagtagcaatgacctctcatgg
agcagcagtatgatgtcccctgttctccgcggttttgcatctgcctccccggagagcctg
tgccaaagagacttgttgtcctaccacagcccaaagagcacgccccgagacagcttcaac
tcctgccactcccccgacccagaagacactccagatctggactccctgtccccctccaat
gttagcagcccctcctcctcacgcttcgtctcccagatcatcggagctgaggacgactac
tttgactctgatcaggaacaggtcaatggccagtgcagctgtttccagagcatggagctg
ctcaagtccagacctgcccacctggcagcgttcctgcatcacgtcgtctcccagtttgac
cctgcaccgctgctctgctacctctacgctgacctgtgcaagcaaaccaactccaaagaa
accagacgggtgttcatggacttccacaacttcttcatcgaccggggagctaatttaaaa
gtagctgttcccgagtccctatcctctgaccttgaccggaggaggacggagctgatccct
gaggagctgaacagacagtacgtccagatggtgcaggacacccagctccctgacatccag
aggaacctggaggactttaggcagaagcgcagtatgggcctaaccctggcggagggggaa
ctggcccggctggacacggagcgcgtcagagaccgggtagcactggagagagaacgtgcg
tgtgctgaaaacatcatcaccaagatagaggatgttctgttgacaactcaatccacagag
gaggagaaatgcactactatgcagtatgtcatcctcacgtacatgaagcaccttggcgtg
aaagtcaaagagccacgcggcctagagtccaaatgggtccgcatcaacttcctacccaag
atgaagaagagcatcaagcccgagaaggagggaggggaggagaaggtgaaacgaaccagg
tttcccagcatcctcgggcctcctcgccggccgagccgcgtcgaccccacgtccgttggc
aaggccatggacctcaacaagccacggccccagaagcagctgtcccagcccagcctgggg
gccctggagcacctggaggcgggtcgcttgagggccagtcagtccagcgagggctcagag
cttatacattcctcctcgaccaacgccacctcgccaaccaacagcaccaccaacaacaac
gcctctgacggaggcagcagagactctgagtttgttgggacccctaactctgccttcccc
aaactgagcgagggtcttggagacctggacagtctagaatacactccaaacacacacttt
gactacaacctgagcccctatagcctggaccagctacaggaggaggacagggagagcgga
gttcttgagggaacacccaaggctatcagaaggttggatggccttggttctacagaggtg
cagagtgaagacgaccaaggaggcactgactctgagcacgaccccctcaactggcagcag
ctggtgggacgagaggtcctggccggactccagccccatgagatcaagagacaggaagtc
attaacgagctgttctacactgagagggcccacctgcggatgctcaaagtgctggacaac
atcttctaccagaagctcaccagagaggccatactgcctcctgccgacatcaagaacatc
ttcaccaacctgggggacattgttcaactgcacgtttggatatctgagcaaatggtagca
attcggaaaaggaatgagacgtccgtaatagaccaaataggagacgacttgctgtcctgg
ttcagcaggggcgaggaggagaagatcaagcaggcggtgggcaccttctgcagcaaccag
cccttcgctctggagctcatcaagagcaggcagaagaaggactcgcgcttcacctccttc
atgcaggaggctgagagtaaccgactgtgtcgaagactccaactgaaggacatcattcct
gtggagatgcagaggctcaccaagtaccctctcctactggaaaacatcgccaagtacacc
gatgacagcgtggagaaagataaggttaagaaggcgggggactgctgcaggaagatcctc
aatcacgtcaaccaagcggtgaaggagtctgaaaacaagcagaggctggaggactaccag
aggcggttagacctctcgtctctgaagcagacagagaaccccgtgatttcagagctcaag
aacctggacctgaccaagaagaagctggtccatgagggaccgctgtcatggaaggtcaac
aaggacaagactattgagctgtacaccctgctcctggaggacatcctggtgctgctgcag
aagcaggacgagcggctcatcctcaagtgccacagcaaaaacctgtctggcaccgccgac
accaagcacatcttcagccccatcatcaagctcaacgcggtgctggtgcgctctgtggcc
acagacaacaagtcgttctttgttctctcaatgtcggacaacggggcccagatctacgag
ctgatggcccagaccgtatcagagcagagaatgtggcagcgccagatcacccagagagcg
gacgccatgaaagtgaacccgaacagcgccatccccttacctcaaacggatggagagcga
gacggtgtggagatcatcactgcagacgtagcccgactcggtaaggaccaggaccgcatc
tcctctggaagcagccaatctatagagggctgcgctgcctctggaggcgagatgcagacc
tctctcccagatgccaaaccatttcaaggactcaagcccgaagaggaggagcccaaccgg
gaggaggggctttacggggacccggaccttgcagataggctgccctttcgcatggccata
gacgggctcagcgaatcggacggtctgggcttcagtccttctagagctgacgatgcctta
aagacattgtcagcgctgaagcaggtccttgtgacccagctcatgtcacaggacgaaggc
gccgggcgctcctcctcggggggtgggcgtctcctcaggaccacgtccctgaggaccccc
gtggacagccgggcccgggtggcggttcagaacggctcagggaggtgcacccaggcaagc
caccctgaggacccggctcaggacctggtgtctggggacacgggcttctttgagtccccc
gaggattatgcagggtacctggtcttggagggctatgggggctcgggggagagcagcacg
gacgatgacctccaggccacggggaagcagctgagcgcctcgcggggctgcggggcagga
gactctgggatcagcctgaggttctcctctgcctcacaggcaggcagcatctccagcttc
agccgacaggtcctgtcccacatccgcaacctgcagaccaacctcaaccacctcaaggag
gtagaggccaagtatcacagtctactacgccaaaggccggccaggtcatcgacagacatg
gacgataacaaagataagagatag
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