Salvelinus fontinalis (brook trout): 129832461
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Entry
129832461 CDS
T11136
Symbol
taf15
Name
(RefSeq) TATA-binding protein-associated factor 2N isoform X1
KO
K13098
RNA-binding protein FUS
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03015
mRNA surveillance pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129832461 (taf15)
09122 Translation
03015 mRNA surveillance pathway
129832461 (taf15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129832461 (taf15)
Spliceosome [BR:
sfon03041
]
Complex A
Other components
Complex A specific factors
129832461 (taf15)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
129832461
NCBI-ProteinID:
XP_055752514
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All DBs
Position
33:complement(49245409..49264154)
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AA seq
438 aa
AA seq
DB search
MASDSGYGQPGAPSYGTYPPAQQSGQAYGQGNGSGSYGGQSHAGYGQSAESYGQTTQAAS
YGQPYDGFGQQGSDSAAGYGGADKSSYSQPSSYGGAADGGSYGQAQGGYRGRSEGEGGQG
RRYGGDDGGSDRGSSDGYRGRGRGGYERGGYDRGGRGGPPSGMGGGDRGGYKNYGGPRDY
GSRDEPTGGSGGSQGSGSGGEQDNSDNNTIFVQGLGEDVTSDEVGNYFKQIGIIKLNKKT
GLPMINLYSDKATGRLKGEATVSFDDPPSAKAAIEWFDGKEFQGKALKVSFATRRAEFTQ
RGGGAGGGGGGRGGGGGGFGGRGRGRGFGGGGGGGGGPNFDIKGGDWPCPNSSCGNMNFA
RRYECNKCGTPKPGDSGGDRGGGGRGYGGDRGGGGYRGRGGFRGGDRGGYGGGGYGGDRG
YKMGGRGDHREDRRDRPY
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgattcgggctacggtcagcctggcgctccaagctatggaacgtatcctcct
gctcagcagagcgggcaggcctacggtcaaggaaatggaagtggctcgtatggtggacag
agtcacgctggctatggacagtctgccgagagttatggccaaacaacacaggcggcaagt
tatggccagccttatgatggctttgggcaacaaggctcggattccgctgctgggtatggt
ggcgctgacaagtcgtcatacagtcagccgagttcctacggtggcgctgctgacggcggc
tcttatggacaagctcaaggcggctacagaggtcgaagtgaaggtgaaggcggtcagggc
aggaggtatggtggagatgatgggggctcagacaggggctcttctgacgggtatagaggc
cgagggcgtggtgggtacgagcgtgggggatacgacaggggtggaagaggcggccctcca
tccggtatgggaggtggtgaccgtggtggctacaaaaattacggtggtcctcgagactac
ggctcaagggatgaaccaactggaggtagcggtggtagccaaggtagcggcagcggtggg
gaacaggacaactctgacaacaacaccatctttgtccagggactgggagaagatgtcaca
agtgatgaagtggggaactacttcaaacagattgggatcattaagttgaacaagaagact
ggcttgcccatgatcaacctgtactctgacaaggctactggaagactgaagggagaggcc
actgtctcatttgatgatccaccttctgccaaagctgccattgaatggtttgacggcaaa
gaattccaagggaaagccctcaaagtgtcttttgccacccgaagagctgagttcacgcag
aggggtggcggtgcaggaggaggaggaggagggagaggaggaggaggtggaggttttggc
ggccgtggtcgtggacgtgggtttggaggaggaggaggtggtggtggtggacccaacttt
gacatcaagggaggggactggccatgtcctaacagttcttgtggcaacatgaactttgcc
cgtagatacgaatgcaacaagtgtggcacaccgaaaccaggggacagcggaggagatcgt
ggtggtggaggccgaggatatggtggtgacaggggcggcggcggctacagaggccgtgga
ggattccgtggaggtgatcgcggtggttatggcggaggtggatatggtggtgacaggggc
tacaagatgggaggaagaggtgaccatagagaagacagaagagatcggccatactaa
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