Salvelinus fontinalis (brook trout): 129832499
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Entry
129832499 CDS
T11136
Name
(RefSeq) short stature homeobox protein 2-like isoform X1
KO
K09331
short stature homeobox protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129832499
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
129832499
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
KBP3
HAUS1
AcrF31
Motif
Other DBs
NCBI-GeneID:
129832499
NCBI-ProteinID:
XP_055752595
LinkDB
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Position
33:complement(51091954..51099252)
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AA seq
305 aa
AA seq
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MEELTAFVSKSFDQKVKEKKEVITYREVLETGSARAREGLATEPNREEMNDIARVDARSP
GREPDMLGPERTRDVGSPKLIDGTTHMKERKEDTKQMEDEAQTKIKQRRSRTNFTLEQLN
ELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKDVLSFLPGV
LIGAASQFEGCRVAPYVNVGALRMPFQQDSHCNVPPFSFQVQAQLQLDSAVAHAHHHLHS
HLAAHAPYMMFPGPPFGLPLATLAAESASAASVVAAAAAAKNTNKNSSIADLRLKAKKHA
AALGL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttaccgcatttgtgtcgaagtcatttgatcagaaagtgaaggaaaagaag
gaggtgatcacgtaccgggaggtgctggagaccggatccgcgcgtgccagggagggtctc
gccaccgaacctaatcgcgaggaaatgaacgatatcgctcgggtagacgcgcgatcgcca
ggcagggaaccggacatgctgggaccagagagaaccagggatgtgggaagcccgaaactg
atcgatggtaccacgcacatgaaagagagaaaagaagacacaaagcaaatggaggacgag
gcacagactaaaatcaagcagaggagaagtcggactaactttacactggagcaattgaac
gagctcgagcggctattcgatgagactcattacccggatgccttcatgcgcgaggagctg
agccagcggctggggctgtccgaggctcgagtacaagtttggtttcagaaccggagggcc
aaatgcagaaagcaggagaatcagttacacaaagatgtcctatcttttcttccaggagtt
ctcattggagccgcgagtcagtttgaaggttgtcgtgtagcgccatatgtcaacgtgggg
gccttacggatgccattccaacaggatagtcattgcaacgtgccgcccttctcctttcag
gtccaggcgcaactgcagttggacagcgcggtggcccacgcgcaccatcacctgcactct
cacctggcagcgcacgctccttacatgatgtttccgggcccgccatttggtttgcccttg
gctacgctcgcggctgaatccgcctctgctgcctcggttgtggccgcagctgcagccgcc
aaaaacaccaacaaaaactccagtattgcagatctgagactcaaggccaaaaaacacgcg
gcagctctgggactgtga
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