Salvelinus fontinalis (brook trout): 129832882
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Entry
129832882 CDS
T11136
Name
(RefSeq) retinoic acid receptor alpha-like isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129832882
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfon03310
]
129832882
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129832882
Nuclear receptors [BR:
sfon03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
129832882
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NCBI-GeneID:
129832882
NCBI-ProteinID:
XP_055752956
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Position
34:4211197..4386212
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AA seq
461 aa
AA seq
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MAGKGNPCHPPGGPGSAGGPTVSVGGFPMPHYSYFFPHMLGGLSPPALSGLPVSRYNTPS
PAAIETQSTSSEEIVPSPPSPPPPPRIYKPCFVCADKSSGYHYGVSACEGCKGFFRRSIQ
KNMVYTCHREKGCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKEEKKPECPEI
YVLSTETEQMIERVRKAHKETFPSLCQLGKYTTNNSAEHRVALDVNLWDKFSELSTKCII
KTVEFAKHLPGFTTLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRTQM
HNAGFGPLTDLVFAFAQTLLPLEMDDAETGLLSGICLLCGDRQDLEQADKVDLLQEPLLE
ALKIYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENS
EGLEGQGANGGRSSGGGAPPGSCSPSLSPSSARSSPPAPSP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaagggtaacccctgccatcccccgggggggccagggagtgcagggggcccc
actgtctctgtggggggattccccatgcctcactactcctacttcttcccccacatgctg
ggggggctgtcccctcccgcgctgtccggactgcccgtcagcagatacaacaccccgtcg
ccagccgccatagagacccagagcaccagctcggaggagatagtccccagtcccccctcg
ccgcctcctcccccacgaatctacaaaccctgcttcgtttgtgcggacaagtcctcagga
taccactatggagtcagcgcctgcgagggctgcaagggtttcttccgccgaagcatccag
aagaacatggtgtacacctgtcatcgcgagaaaggctgcatcatcaacaaggtcacccgc
aaccgctgccagtactgccgcctgcagaagtgtttagaagtgggcatgtccaaggagtcg
gtgaggaacgaccggaacaagaagaagaaggaggagaagaagcccgagtgtccggagatc
tacgtgctgagtaccgagacggagcagatgatcgaacgcgttcgcaaggcccataaggag
acgtttccctcgctctgtcagctgggcaaatacaccacgaataacagtgcagagcaccgc
gtggctctagacgtaaacctatgggataagttcagtgagctgtccactaagtgtatcatc
aagacggtggagtttgccaaacatctgccgggcttcaccaccctcactatcgctgaccag
atcaccttgctcaaggctgcctgtctggacatactgattctgaggatatgcacgcgctac
actccagaccaggacaccatgaccttctcagacgggctgaccctgaacaggacccagatg
cacaacgcgggcttcggcccgctcacggacctggtgttcgccttcgcccaaacactcctc
cccctggagatggacgacgccgagaccggcctgctcagcggcatctgtctgctgtgtgga
gaccgtcaggatctggagcaggcagacaaggtggacttgctacaggagcccctactggag
gctctgaagatctacgtgaggaagaggaggcctcacaaaccgcacatgttccccaagatg
ctgatgaagatcacggacctcaggagcatcagcgccaagggagcggagcgagtgatcact
ctgaagatggagatcccaggctccatgccccctctcatccaggagatgctggagaactca
gagggcctggagggccagggggccaacggggggcgctccagcggaggaggggccccacca
ggcagctgcagccccagcctgtcccccagttcagctcgcagcagtccccctgcaccctct
ccttag
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