Salvelinus fontinalis (brook trout): 129832977
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Entry
129832977 CDS
T11136
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04137
Mitophagy - animal
sfon04144
Endocytosis
sfon04145
Phagosome
sfon04148
Efferocytosis
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129832977
04145 Phagosome
129832977
04137 Mitophagy - animal
129832977
04148 Efferocytosis
129832977
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129832977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129832977
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129832977
04031 GTP-binding proteins [BR:
sfon04031
]
129832977
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
129832977
Endosome - Lysosome transport
129832977
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129832977
Exosomal proteins of other body fluids (saliva and urine)
129832977
Exosomal proteins of colorectal cancer cells
129832977
Exosomal proteins of bladder cancer cells
129832977
GTP-binding proteins [BR:
sfon04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
129832977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
MCR_beta
AAA_16
BrnT_toxin
Motif
Other DBs
NCBI-GeneID:
129832977
NCBI-ProteinID:
XP_055753134
LinkDB
All DBs
Position
34:7665066..7682256
Genome browser
AA seq
219 aa
AA seq
DB search
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagactgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaacatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatctttatggccatagccaag
aagcttcctaagaacgagccagctggtggagccggtggccgggccggtggtcgggcagga
gtggacctgcaggaagccgccccacaggctggtggtagcaagtgctgtggtgggaactaa
DBGET
integrated database retrieval system