Salvelinus fontinalis (brook trout): 129833021
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Entry
129833021 CDS
T11136
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
sfon
Salvelinus fontinalis (brook trout)
Pathway
sfon03266
Virion - Herpesvirus
sfon04081
Hormone signaling
sfon04145
Phagocytosis
sfon04148
Efferocytosis
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04517
IgSF CAM signaling
sfon04518
Integrin signaling
sfon04810
Regulation of actin cytoskeleton
sfon04820
Cytoskeleton in muscle cells
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
129833021
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
129833021
04512 ECM-receptor interaction
129833021
04517 IgSF CAM signaling
129833021
04518 Integrin signaling
129833021
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
129833021
04148 Efferocytosis
129833021
09144 Cellular community - eukaryotes
04510 Focal adhesion
129833021
09142 Cell motility
04820 Cytoskeleton in muscle cells
129833021
04810 Regulation of actin cytoskeleton
129833021
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129833021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129833021
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129833021
04515 Cell adhesion molecules [BR:
sfon04515
]
129833021
04090 CD molecules [BR:
sfon04090
]
129833021
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
129833021
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129833021
Cell adhesion molecules [BR:
sfon04515
]
Integrins
Integrin beta subunits
129833021
CD molecules [BR:
sfon04090
]
Proteins
129833021
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
129833021
NCBI-ProteinID:
XP_055753213
LinkDB
All DBs
Position
34:complement(9116966..9134820)
Genome browser
AA seq
787 aa
AA seq
DB search
MGTFFDRLWIFSGLLLASSEVFGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKGGLEFPLSSLSVQENTPLSDKASGAADDVTQIRPQKLSLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAISNPCLGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAIIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
GRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVVPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKPEDPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVERFQYYEDASGKSILYVMEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVSIHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggaactttttttgaccgactatggatattttctggtttattattagcttcttctgaa
gtttttggctcaaacatctgcacatctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccggtgtgacctgaagcagaacctgttggatggggggtgtacgaagggggggctagag
ttccccctcagtagcctcagtgtgcaagaaaacacgcccctcagtgacaaggcatcgggg
gcggctgacgacgtcacccagatcagaccccagaaactcagcctcactctgagaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccggttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgttccctgggc
aaccagctggctgcagccatgggtcgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtatacctaccctgaggaagcaatcagtaac
ccttgccttgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtcg
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcgatcatacaggcagtggtgtgcaaggacaag
ataggctggcgtggggatgcctcccacctgttggtgttcactaccgacgctacgacacac
atagccttggacggccggctggctggtctagtgcagcccaatgatggacagtgtcacatc
ggcagagacaacaactatgacaagtcgtcaaccctggactacccctctctggctctgatc
acagagaagatgtcggagaacaacatcaacctcattttcgctgtgaccaacaatgtggtg
cccctctaccagaactacagccagctgattcctggcaccacagttggaacgctgtcggat
gactctgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gaattggagttgctgggtgttccagaggagctggctctgtccttcaacgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacagtg
tcgttcagtgtggaggccaggttacgcggctgccctaaggagaagaaccgtaccttcacc
attaaacccgtgggcttcaaggacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagccctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgagtgtgccgac
ggggactacaggccctcagaccagggcaactgcagccccaaacctgaggaccccatctgc
agtgggaggggaaactgtgtgtgtggacaatgctcctgccacactagtggctttggaaag
gtgtggggcaaatactgcgagtgtgacgacttcaactgcctgcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgattggatgggg
gagaactgtaactgcacaacccggacagacacctgcatgtccagcatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaggaatgtgtt
gaatgtaagcacttcaagagaggccgtctctttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtagagcgcttccagtactacgaggatgccagcgga
aagtccatcctgtatgtcatggagcctgactgccctaaagggcctgatatcctggtggtt
ctcatggcagtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcagcatccacgaccgccgagagttcgccaagtttgaggaggagagggctaag
gccaaatgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtcacctaccgtgggaactcttga
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integrated database retrieval system