KEGG   Salvelinus fontinalis (brook trout): 129833021
Entry
129833021         CDS       T11136                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03266  Virion - Herpesvirus
sfon04081  Hormone signaling
sfon04145  Phagocytosis
sfon04148  Efferocytosis
sfon04510  Focal adhesion
sfon04512  ECM-receptor interaction
sfon04517  IgSF CAM signaling
sfon04518  Integrin signaling
sfon04810  Regulation of actin cytoskeleton
sfon04820  Cytoskeleton in muscle cells
sfon05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    129833021
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    129833021
   04512 ECM-receptor interaction
    129833021
   04517 IgSF CAM signaling
    129833021
   04518 Integrin signaling
    129833021
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    129833021
   04148 Efferocytosis
    129833021
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129833021
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129833021
   04810 Regulation of actin cytoskeleton
    129833021
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129833021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfon04131]
    129833021
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfon04147]
    129833021
   04515 Cell adhesion molecules [BR:sfon04515]
    129833021
   04090 CD molecules [BR:sfon04090]
    129833021
Membrane trafficking [BR:sfon04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    129833021
Exosome [BR:sfon04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129833021
Cell adhesion molecules [BR:sfon04515]
 Integrins
  Integrin beta subunits
   129833021
CD molecules [BR:sfon04090]
 Proteins
  129833021
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_TEN
Other DBs
NCBI-GeneID: 129833021
NCBI-ProteinID: XP_055753213
LinkDB
Position
34:complement(9116966..9134820)
AA seq 787 aa
MGTFFDRLWIFSGLLLASSEVFGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKGGLEFPLSSLSVQENTPLSDKASGAADDVTQIRPQKLSLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAISNPCLGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAIIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
GRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVVPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKPEDPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVERFQYYEDASGKSILYVMEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVSIHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgggaactttttttgaccgactatggatattttctggtttattattagcttcttctgaa
gtttttggctcaaacatctgcacatctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccggtgtgacctgaagcagaacctgttggatggggggtgtacgaagggggggctagag
ttccccctcagtagcctcagtgtgcaagaaaacacgcccctcagtgacaaggcatcgggg
gcggctgacgacgtcacccagatcagaccccagaaactcagcctcactctgagaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccggttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgttccctgggc
aaccagctggctgcagccatgggtcgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtatacctaccctgaggaagcaatcagtaac
ccttgccttgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtcg
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcgatcatacaggcagtggtgtgcaaggacaag
ataggctggcgtggggatgcctcccacctgttggtgttcactaccgacgctacgacacac
atagccttggacggccggctggctggtctagtgcagcccaatgatggacagtgtcacatc
ggcagagacaacaactatgacaagtcgtcaaccctggactacccctctctggctctgatc
acagagaagatgtcggagaacaacatcaacctcattttcgctgtgaccaacaatgtggtg
cccctctaccagaactacagccagctgattcctggcaccacagttggaacgctgtcggat
gactctgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gaattggagttgctgggtgttccagaggagctggctctgtccttcaacgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacagtg
tcgttcagtgtggaggccaggttacgcggctgccctaaggagaagaaccgtaccttcacc
attaaacccgtgggcttcaaggacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagccctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgagtgtgccgac
ggggactacaggccctcagaccagggcaactgcagccccaaacctgaggaccccatctgc
agtgggaggggaaactgtgtgtgtggacaatgctcctgccacactagtggctttggaaag
gtgtggggcaaatactgcgagtgtgacgacttcaactgcctgcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgattggatgggg
gagaactgtaactgcacaacccggacagacacctgcatgtccagcatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaggaatgtgtt
gaatgtaagcacttcaagagaggccgtctctttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtagagcgcttccagtactacgaggatgccagcgga
aagtccatcctgtatgtcatggagcctgactgccctaaagggcctgatatcctggtggtt
ctcatggcagtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcagcatccacgaccgccgagagttcgccaagtttgaggaggagagggctaag
gccaaatgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtcacctaccgtgggaactcttga

DBGET integrated database retrieval system