Salvelinus fontinalis (brook trout): 129833132
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Entry
129833132 CDS
T11136
Name
(RefSeq) ELAV-like protein 3 isoform X1
KO
K13208
ELAV like protein 2/3/4
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129833132
03041 Spliceosome [BR:
sfon03041
]
129833132
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129833132
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129833132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
BRAP2
RRM_3
RNA_bind
Motif
Other DBs
NCBI-GeneID:
129833132
NCBI-ProteinID:
XP_055753421
LinkDB
All DBs
Position
34:11992296..12003567
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AA seq
384 aa
AA seq
DB search
METQVSNGPSGTGLPNGPVISTNGATDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESC
KLVRDKITGIHDASAGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSAS
IRDANLYVSGLPKTMTQKDMEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEAE
EAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFSLI
PPFGKGPDPNNSTKPILDNLLNASYGVKSSPSLLPRFSPITIDSMTSLAGVNLTGPTGAG
WCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIA
SLNGYRLGDRVLQVSFKTSKQHKA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccaggtgtccaacggtccgagcggaaccggcctgcctaacgggccagtcatc
agcaccaacggtgccacagacgacagcaagaccaacctaatcgtcaactatctgcctcag
aacatgacccaggaggaattcaagagcctgtttggtagcatcggagagattgaatcctgc
aaactggtccgagacaagattacaggtattcatgatgcttcagcaggccagagtttgggc
tatgggttcgtaaactatgtggatcccaatgacgcagacaaggccatcaacacactcaac
ggtctcaaactgcagaccaaaacaattaaggtatcgtacgcccgccccagttcagcttct
atccgtgatgccaacctgtatgtgagcggtctgcctaagaccatgacccagaaggacatg
gagcagctgttctcccagtacggacgcatcatcacctcccgcatcctggtggaccaggtt
acagcaggtatatcgcgaggagtgggcttcatccggtttgacaagcggaacgaggcagaa
gaggccatcaagggcctgaacggccagaagcccctgggcgcagccgaacccatcacggtg
aagttcgccaacaaccccagccagaagacgggccaggccctgctcacccagctgtaccag
accgctgcacgccgctacactggccctctgcaccaccagactcagcgcttcagcctcatc
cctccatttggaaagggaccagatccaaataacagcacaaaaccaatactcgacaattta
ctaaacgccagctacggagtcaagagttctccctctctccttcctaggttctcccccatt
accatcgacagcatgaccagcctggcgggagtcaacctgaccgggcccaccggagccggc
tggtgcatcttcgtctacaacctatcgcccgaggctgacgaaagcgtcctgtggcagctg
tttgggcccttcggcgccgtcacaaacgtcaaggtcatccgtgacttcaccaccaacaaa
tgtaagggcttcggcttcgtcaccatgaccaactacgacgaggcagccatggccatcgct
agtctcaacggctaccgcttgggagaccgcgtgctgcaggtctccttcaagaccagcaag
caacacaaggcctga
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