Salvelinus fontinalis (brook trout): 129833141
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Entry
129833141 CDS
T11136
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K20995
Notch 3
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04330
Notch signaling pathway
sfon04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129833141
04371 Apelin signaling pathway
129833141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
EGF_2
Notch
NODP
NOD
Ank_3
EGF_3
Ank_4
Ank_5
EGF_DL_JAG
EGF_Teneurin
Plasmod_Pvs28
cEGF
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
129833141
NCBI-ProteinID:
XP_055753443
LinkDB
All DBs
Position
34:12729847..12772844
Genome browser
AA seq
2477 aa
AA seq
DB search
MGGNYKVWIFLPILFLVHNCEGFRCVDKYRPCDNGGTCIDSPSRCICRPGYIGPLCQSLD
PCHRSPCLNGAACKSQVANGMPQFTCVCQRGFRGQDCSLIDACATSPCANGARCASWNNH
YNCSCPPGFQGKNCRNDIDECRKSGVCLNAGLCMNTHGSFRCQCPPGYSGRTCEVSSLPC
APSQCINGGTCRPTGDHTYDCACLPGFEGHNCETNVDDCPGHRCMNVGLCVDGVNTYNCQ
CPPEWTGQYCAEDVNECLMQPNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENIDDCATA
VCFNGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPA
GFVGGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYAGPRCEIDINECLSMPCQ
NDATCLDRIGEFTCICMPGYMGTYCEVDVDECESNPCVNDGICRDMVNGFTCTCQPGFTG
TMCQIDIDECASTPCQNGAKCYDRPNGYECRCAEGYEGTLCESNTNNCQPDPCHHGTCVD
GIASYTCNCEAGYTGYRCENQLNECHSNPCQNGGKCVDLVNKYICQCQHGTSGTNCEINF
DDCASKPCDYGICKDGINRYDCVCKPGFTGPLCNVEMDECSSGPCRNGGTCVDEENGFHC
QCPEGFQPPYCFSQVDECGSNPCVHGACRDDINGYRCDCEPGWVGKNCDLDRNDCLPSPC
QNAGTCIDQLNGFTCKCRHGFRGNLCQVNINECSSSPCLNQGTCVDGVASFTCLCELPYS
GPTCADVLTPCSPNPCANHALCTNTPDYLGYHCNCQQGWQGQLCNIDVNECIANPCKNRG
TCTNTLGGFVCSCRGGFTGPNCETDINDCAPNPCLSGGSCTDGVNSFRCSCLPGFMGPRC
AVEVNECQSAPCKNGGTCTDYVNSYTCTCRPGFTGINCETNIPDCTESSCFNGGTCTDKI
NGYSCNCRSGFTGSHCQYEVNECDSQPCLNGGVCQDALESFRCSCPKGYTGNRCQMPVDW
CRRSSPCQNGGRCRQNDASFSCECLGGWSGRYCDIPGVSCEVAALKRGLQTDELCHHGGH
CVNTGNTHYCKCPTDYTDSYCESQVDHCEDKHCRNGATCRGYVGGYQCDCMPGYTGENCE
MEVNECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCAPPLRLRGTPFKCLNN
GTCVDRVGGYRCNCPPGFTGERCEGDINECHSNPCSPANSLDCIQLPNDYQCVCKPGFTG
RRCQSRFGECESQPCQNGGACSVSSSSSLGYACTCQLGYAGNNCERSMSCQELSCYNGGS
CDLTTRGSRCTCLTGYAGPQCQHRSNEGCSSQPCRNGGLCTEETSFPFFLCQCAQGWTGK
RCEQGSTRLVEPPLPPACPLADCHSKANDGVCDKECNTFPCRWDGGDCSLAVNPWARCTD
PRCWRVFNNSQCNESCNNADCLYDNFDCKNKEKICNPIYEAYCIDHYADGRCDQGCNSEE
CGWDGLDCAGKVPENLADGVLVLVVLLPPDELVNTAPAFLQKLSAILRTTLRFRLDHNGE
PMIHPYTGREARIKRELQPHQEVIGSIVYLEIDNRLCSQRSDDCFPSADSAADYLGALSA
VEMLHFPYPIKEVRGEKVPYPVDMPVWGKLMLVGMAALFLLVILVVGVLIGRRKREHSTL
WFPEGFFPKKEPSSNKNRREPLGQDALGMKYMPKTVEESLLGDHSDSWIDTDCPEAKRLK
VEEPSILSDSEDTVDCRQWTQHHLAAADIRMPPSMALTPPQGEFDQDCMDVNVRGPDGFT
PLMLASFCGGGLEPELPEEEESEECSANIISDLIYQGATLAAQTDRTGETALHLAARYAR
ADAAKRLLDAGADANAQDNTGRTPLHAAVAADAQGVFQILIRTRATDLDSRMYDGSTALI
LAARLAVEGMVEELITCHADINAVDELGKSALHWAAAVNNVEATMALLKNGANKDMQDLK
EETPLFLAAREGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVR
SPQGHGGAPHHLAGGHTLSPLMCPPSAFMPGLKNTPQGKKSRRPGAKGSCLGGQHAQNLK
DSAKARNKKLTLDMQSALLESSVTLSPVDSLDSPRGGANNAGYITNPCSPVAMSSSGLFH
SSMSVPSTPMVHSSMMDGSGPFAVSLAQLNDLGDGGMSMQGRVSMASQVNQGPHGYMLNA
GQLGLNMGLVSPVSVPFDWHSRMPSSSQCGGQVVNLVHSSQAGMHPQSPMQQQQNSLMMQ
QHQQHQQNLYRSAQQAMLQPTPVIASTPISHSPVKLPSIAEQQQQLHNHSMASQQSLRMG
TSSPPTPQTTQPPPAFFQQQQQPPQPQPATQPTSPQASQAPPPQASGSTAGLEDYPTPPS
QHSYPSTLDATPKHYLRLSSEHPYLTPSPESPEPWSSPSPHCVSDWSDSTPSPAVAGPAQ
TQIPHVQESNGKMQVFA
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgggggggaattataaagtttggatatttttaccaattttattcttggtccataattgc
gaaggattccgctgcgtggataaatacagaccttgtgacaatggaggaacgtgcatagac
tcaccctcgcgatgcatatgtcggccggggtacatcggccctctgtgccaaagcctggac
ccctgtcaccggtcgccatgcctcaacggagccgcctgcaagagccaggtggccaacggg
atgccacaattcacctgtgtgtgccagagagggttcagaggtcaagactgctccctcata
gacgcctgtgccaccagcccctgtgccaatggcgcccgctgtgccagttggaataaccac
tataattgttcctgcccgcccgggttccaggggaagaactgccgcaacgatatcgacgag
tgccgcaagtctggcgtctgtctcaatgcaggcctctgcatgaacacccatggttccttc
cgctgccagtgcccacctgggtacagcgggcgcacctgcgaggtgtcctccctgccctgc
gccccctcccagtgcatcaacgggggcacctgccgcccgaccggagatcacacctacgac
tgtgcctgcctgccagggttcgagggacacaactgtgagacgaacgtggacgactgccca
gggcataggtgtatgaatgtaggcctgtgtgtggatggagtcaacacctataattgccag
tgcccacctgagtggacaggtcagtactgtgcagaggatgtcaatgagtgccttatgcag
cccaacgcctgccataacggaggcacctgcttcaacaccatcggggggcacacctgcgtg
tgcgtcaacggctggacgggagacgactgcagcgagaacatcgacgactgtgccaccgcc
gtgtgcttcaacggcgccacctgccacgaccgcgtggcgtccttcttctgcgaatgcccc
gtggggaaaaccggtctgctctgtcacctggacgacgcgtgcgtcagcaacccgtgtaac
gagggcgccgtgtgtgacaccaaccccctgaacgggcgcgccatctgcacctgtcccgcc
ggctttgtgggcggagcctgcaaccaggacatggacgagtgttccattggtgccaacccc
tgtgaacactttgggaagtgtgtgaacacggaggggtccttccagtgccagtgtggccga
ggctacgccggaccccgctgtgagatagacatcaacgagtgtctgtccatgccctgccag
aacgatgccacctgtctggaccgcatcggagagttcacctgcatctgcatgccaggctac
atggggacctactgtgaggtggatgtggatgagtgtgagagcaacccttgtgtgaacgac
ggtatctgccgggacatggtcaacggcttcacatgcacctgtcagccagggtttactggc
accatgtgtcagatcgacattgatgagtgcgccagcacgccctgccagaacggagccaag
tgttacgaccggcccaacggatacgagtgccgctgtgctgaagggtacgagggcacactg
tgcgagagcaacaccaacaactgccagcccgacccgtgccaccacggcacctgcgtggac
ggcatcgccagctacacgtgtaactgcgaggcgggctacacgggctaccgctgcgagaac
cagctgaacgagtgccacagtaacccctgccagaatgggggcaagtgtgtggacctggtc
aacaagtacatctgccagtgtcagcacggtacctcaggtaccaactgtgagattaacttt
gatgactgcgccagcaaaccatgtgactatggcatctgcaaggacggcatcaaccgctac
gactgcgtgtgcaaaccaggcttcaccggccctctgtgcaacgtggagatggacgagtgc
tcgtccggaccctgccggaacggggggacgtgtgtggacgaggagaacggcttccactgc
cagtgtcccgagggcttccagcctccctactgtttctcccaggtggacgagtgtggcagc
aacccctgtgtgcacggcgcctgcagagacgacatcaacggctaccgctgtgactgtgag
cccggctgggtggggaagaactgtgacctagaccgtaatgactgtctgcccagcccctgt
cagaacgctggcacctgcatcgatcagctgaacggattcacctgcaagtgtcgccacggc
ttcagaggtaacctgtgccaggtaaacatcaacgagtgttcgtccagtccgtgtctgaac
cagggcacgtgtgtagacggcgtggccagtttcacctgtctgtgtgagctgccctacagc
gggcccacctgtgccgacgtgctcaccccctgctcccccaacccctgcgccaaccatgcc
ctgtgcaccaacacacctgactacctgggctaccattgcaactgccagcaaggatggcaa
ggtcagctgtgcaacattgacgtgaacgagtgcatcgccaacccgtgtaagaaccgtggt
acctgcaccaacacactgggagggttcgtgtgctcctgccgcggcggcttcaccgggccc
aactgtgagacggacatcaatgactgtgcccctaacccgtgtctgagcgggggttcctgt
acggacggagtgaactcgttccgctgcagctgtctgccaggcttcatggggcctcgctgt
gccgtggaggtgaacgagtgtcagagcgccccctgtaagaacggaggcacctgcacagac
tacgtcaacagctacacctgcacctgcagacctggcttcactggcattaactgtgagacc
aacatcccagactgcactgaaagctcatgcttcaacggaggtacctgtacagacaagatc
aacggctactcctgtaactgtcgctcaggcttcacaggctcccactgccagtatgaggtg
aatgagtgtgactcccagccctgcctcaacggaggggtctgccaggacgctctggagtcc
ttccgctgctcctgccccaagggatacacaggcaaccgctgccagatgccagtggactgg
tgcagacgctcgtctccctgtcagaacggagggcgctgtcgtcagaacgacgcctccttc
tcctgtgagtgtctgggaggctggtctggacgctactgtgacatccctggggtttcctgt
gaggttgccgcgctcaagaggggcctccagacagacgagctgtgtcatcatggaggtcac
tgtgtcaacacaggcaacacccactactgtaagtgtcccacagactacacagacagctac
tgtgagagccaggtggatcactgtgaggacaaacactgtcgcaacggcgccacctgcagg
ggctacgtgggaggataccagtgtgactgtatgccgggctacaccggagagaactgtgag
atggaggtcaacgagtgccagtctcacccgtgtcagaacggtggcacctgcattgacctg
gtgggacactacatctgctcctgcccacctggcaccttgggtgttctgtgtgagatcaac
gaggatgactgtgctcctcctctgaggctgcgcgggactccttttaagtgtctgaacaac
ggtacctgtgtggacagggtggggggctatcgctgtaactgtccccctggcttcactgga
gagaggtgtgagggggacatcaacgagtgtcactccaacccctgcagccccgccaacagt
ctggactgcatccagctccccaacgactaccagtgtgtctgcaagcccggcttcacaggt
cggcggtgccagagcaggttcggtgagtgcgagtctcagccctgtcagaacggaggggcc
tgttctgtctccagcagctcatcccttggatatgcctgtacctgtcagctgggctatgct
gggaacaactgtgagaggagcatgtcatgtcaggagttgtcttgctataatggaggtagt
tgtgatctgaccacgcggggctcccgctgtacctgcctgacaggctacgccgggccccag
tgccagcaccgtagtaacgagggctgctcctcccagccgtgccgcaacggaggcctctgc
accgaggagaccagcttccccttcttcctctgccagtgtgcccaaggctggacgggcaag
cgctgcgagcagggcagcaccaggctggtagagccccctctgccgcccgcctgccccctg
gctgactgccacagcaaggccaacgacggtgtctgcgacaaggagtgcaacacattcccc
tgccgctgggacgggggcgactgctcgctggcggtgaacccgtgggcgcgctgcaccgac
ccgcgctgctggcgtgtctttaacaacagccagtgtaacgagtcgtgcaacaacgccgac
tgcctctacgacaactttgactgcaagaacaaggagaaaatctgcaatcccatctacgag
gcgtactgcatcgaccactacgctgacggacgctgtgaccagggctgtaactcagaggag
tgtggctgggacggtctggactgtgcagggaaggttccagagaacctggccgacggggtg
ctggtcctggtggtcctgctacccccggacgaactcgtgaatacggcccctgccttcctg
cagaagctcagcgccatcctgagaaccaccctgcgcttccgcctggaccacaacggagag
cccatgatccatccgtacaccggccgagaggcgcgcatcaaacgagagctgcagccccac
caggaggtcattgggtccatagtgtacctggagatagacaaccgtctgtgttcccagcgg
tctgacgactgtttcccgtcggcagacagcgcagcagactacctgggagccctgtcagcc
gtggagatgctccacttcccctaccccatcaaagaagtccgcggtgagaaggtcccgtac
cctgtagacatgccagtgtggggcaagctgatgctggtgggcatggcagccctgttccta
ttggtcatcctggtggtgggcgtgctgatcggccgcaggaagagagaacacagcaccctg
tggttccctgagggcttcttccccaagaaggaacccagcagcaacaagaaccgcagggaa
cccttaggccaggatgcactgggcatgaaatacatgcccaagacggtggaggagtctctg
cttggtgaccacagtgactcgtggatcgacacagactgccccgaggccaagagactgaag
gttgaggagcccagcatcctgtcagacagtgaagacactgtagactgtagacagtggacc
cagcaccacctagcggctgcagacatccgcatgcccccctccatggccctcaccccgccc
cagggagagtttgaccaggactgcatggacgtcaacgtccgaggacctgacggtttcacc
cctctgatgctggcgtcgttctgcggaggcggtctggagcccgagctccccgaggaggag
gagtcagaggagtgttccgccaacatcatctctgacctcatctaccagggcgccacattg
gccgcccaaacggaccgcaccggagagaccgcccttcacctggctgctcgctacgcccgc
gctgacgccgccaagcggctgttggacgccggggccgacgccaacgcgcaggacaacaca
gggcgcacgccgctacacgccgccgtggccgccgacgcccagggggtcttccagattctg
atccgaacccgggctacagacctggactctcgtatgtacgacggctccaccgccctgatc
ctggctgcccgcctggccgtagagggcatggtggaggaactcatcacctgccacgcagac
atcaacgctgtcgacgaactgggtaaatctgctctgcactgggcagctgctgtcaacaac
gtggaggccaccatggctctgctgaagaacggagccaacaaagacatgcaggacctcaag
gaggagacgcctctcttcctggcggcgcgtgagggtagttgtgaggcggtcaaggtcctc
ctggcccacttcgccaacagggagataaccgaccatatggaccgtctgccacgggacatc
gcccaggagagaatgcaccatgacatcgttcagctgctggatgagtacaacacagtgagg
agcccccagggccacggaggggccccacaccacctggccgggggacacaccctgtccccc
ctcatgtgcccccccagtgccttcatgcccggcctgaagaacaccccccaggggaagaag
agtcgccgccccggggcaaagggttcatgtctgggagggcagcatgcccagaacctcaag
gattcagctaaggcccgcaacaagaagctgaccctggacatgcagagcgccctgctggag
agctcggtcaccctgtcccccgtcgactccctggactccccccgcggaggggccaacaac
gccggctacatcaccaacccctgctccccggtcgccatgtcctcctcggggctcttccac
tcctccatgtcggtgcccagcactcccatggtgcacagcagcatgatggacggctctggc
cccttcgctgtgtctctggcccagctcaacgacctgggagatggaggcatgtccatgcag
ggccgcgtgtccatggccagccaggtcaaccagggcccccacggctacatgctcaatgcc
ggccagctggggctcaacatgggcctggtgagccctgtcagcgtgcccttcgactggcac
agccgcatgccctcctcctcccagtgcgggggacaggtggtgaacctggttcacagcagc
caggcgggcatgcaccctcagagccccatgcagcagcagcagaacagcctcatgatgcag
cagcaccagcagcaccagcagaacctgtaccgcagtgcccagcaggccatgctgcagccc
acgcctgtcatcgccagcacgcccatctcccacagccccgtcaagctgccctccatcgca
gagcagcagcagcagctccacaaccactccatggccagccagcagagcctccgcatgggc
acctcctccccacccaccccccagacgacacagccccctccagccttcttccagcagcag
cagcagcctcctcagccccagccagccactcaacccacctctccacaggcctcccaggcc
cctcctccccaggccagtggcagcactgcaggcttggaggactaccccaccccgccctcc
cagcacagctacccctccaccctggatgccacccccaagcattacctccgcctgtccagc
gagcatccctacctgaccccctccccagagtcgcccgagccctggtccagcccctccccc
cactgtgtgtctgattggtcagactccacccccagcccggcggtggccggtcctgcccaa
acccagatcccccatgtccaggagtccaacggcaagatgcaggtgtttgcatga
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