KEGG   Salvelinus fontinalis (brook trout): 129833218
Entry
129833218         CDS       T11136                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03020  RNA polymerase
sfon03420  Nucleotide excision repair
sfon04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129833218
  09124 Replication and repair
   03420 Nucleotide excision repair
    129833218
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    129833218
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfon03021]
    129833218
   03400 DNA repair and recombination proteins [BR:sfon03400]
    129833218
Transcription machinery [BR:sfon03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     129833218
  RNA polymerase III system
   RNA polymerase III
     129833218
  RNA polymerase I system
   RNA polymerase I
     129833218
DNA repair and recombination proteins [BR:sfon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129833218
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 129833218
NCBI-ProteinID: XP_055753609
LinkDB
Position
34:14116866..14119530
AA seq 127 aa
MSDNEGDFDDGDFDDAEEDEGLDDLENVEDEDQENVKILPAGEGSQANQKRITTQYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCRKIPIIIRRYLPDGSYEDWGC
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccgacaacgaaggagattttgatgatggagactttgatgacgctgaagaggatgag
ggattggatgacctggaaaacgttgaagatgaggaccaagagaatgtgaagatcctgcct
gcaggggaggggtcgcaggccaaccagaagaggatcacaacccaatacatgaccaaatat
gaaagggcgagggtgctggggacacgtgccctccagatagccatgtgtgccccagtcatg
gtggagctggagggagagacagaccctctgcaaattgccatgaaagagctaaagtgcagg
aagatccccatcatcatccggcggtaccttcctgatggcagttatgaagattggggctgc
gacgagctcatcatcacagactga

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