KEGG   Salvelinus fontinalis (brook trout): 129833431
Entry
129833431         CDS       T11136                                 
Name
(RefSeq) elongin-B-like isoform X1
  KO
K03873  elongin-B
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129833431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sfon04121]
    129833431
   03400 DNA repair and recombination proteins [BR:sfon03400]
    129833431
Ubiquitin system [BR:sfon04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     129833431
   Cul5 complex
     129833431
DNA repair and recombination proteins [BR:sfon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     129833431
SSDB
Motif
Pfam: ubiquitin Ubiquitin_4
Other DBs
NCBI-GeneID: 129833431
NCBI-ProteinID: XP_055754004
LinkDB
Position
34:19721785..19725183
AA seq 155 aa
MRTFCDSRSAAWDSGGATDRPREMDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKR
APEEQRLYKELPKSALTSLLYQDDMLLEDSKTLGDCGFTNQTARPQAPGTVGLAFRLGDD
AFEQLRVEPFSSPPELPDVMKPQDSGSTANEQAVQ
NT seq 468 nt   +upstreamnt  +downstreamnt
atgagaacgttttgtgattctcgcagtgcagcgtgggatagcggaggcgcaaccgaccga
ccgagagaaatggatgtgtttctgatgatccggcgtcacaagacgaccatcttcactgat
gccaaagagtcaactacggtctacgagctgaagcgcatagtggagggtatcctaaagagg
gcaccggaggaacagaggctgtacaaggaactccccaagtctgctctgacatctctcttg
tatcaggatgacatgttgctggaggatagtaagactcttggagactgtggcttcacaaat
cagacagccagacctcaggccccagggactgttggattagctttccgtctcggtgatgat
gcatttgagcagctgagggttgagcccttctccagccccccagagcttcctgacgtcatg
aagccccaggactctggcagcacagccaatgagcaggccgtgcagtga

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