Salvelinus fontinalis (brook trout): 129833820
Help
Entry
129833820 CDS
T11136
Name
(RefSeq) neuronal-specific septin-3-like isoform X1
KO
K16938
septin 3/9/12
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129833820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129833820
04812 Cytoskeleton proteins [BR:
sfon04812
]
129833820
04147 Exosome [BR:
sfon04147
]
129833820
Cilium and associated proteins [BR:
sfon03037
]
Motile cilia and associated proteins
Sperm associated proteins
129833820
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
129833820
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129833820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
AIG1
GTP_EFTU
Roc
Ras
Dynamin_N
AAA_16
NB-ARC
AAA_22
ABC_tran
GBP
URGCP_GTPase
IIGP
AAA_29
PduV-EutP
G-alpha
FtsK_SpoIIIE
P-loop_TraG
AAA_7
Ploopntkinase3
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
129833820
NCBI-ProteinID:
XP_055754611
LinkDB
All DBs
Position
34:complement(37495482..37642565)
Genome browser
AA seq
627 aa
AA seq
DB search
MSDSTVNAHLEGILSDFEALKRSFEVEESDVSINPSPLSRRTNLRSSTSSQRSFHDLGSS
RNSDYPSRTSPSDSNPCSPKTSLRRMELSGGVVGGRALETASTRRTEISIEVSSKQIDSS
PSPGIARFGLKRPEAQSLGSRAGAVPESSTISSSSSAHRRAEISLSRPHEPPGAPRRGDS
QPPSATRIPDPPQRRTDPTMVSPVEGPTSRRPERPVFRQPEMAAPPPVRVVENNSHPPAP
SGPLPSLVEPRSERTQPLVSETPVVRPIERSEVTTSYNSRAMSEVAVPEMMMPPPAVPAA
CQVEKPVPGPGMGDFSYVGIDAILEQMRRKAMKQGFELNIMVVGQSGLGKSTLMNTLFKS
KVSRKSVQATSQEKIPKTIHIKSVSHDIEEKGVRMKLTVIDTPGFGDQINNENCWQPIMK
FINAQYEQYLQEEININRKKRIPDSRVHCCIYFIPPTGHCLRPLDVEFMRRLSKVVNIVP
VIAKADTLTLEERDFFKQKIREELRANGIDVYPQKEFDEDAEDRMINDKIREMIPFAVVG
SDQEYQVNGRRLLGRKTKWGTIEVENIAHCEFAYLRDLLIRTHMENIKDITSSIHYEVYR
VRRLNENNTAVAHANGLPQHHMTSHEM
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattccactgtcaatgctcacttggaaggaatcctatcagactttgaagcacta
aagaggtcgtttgaggtggaggagtctgacgtctccatcaacccctcccctctgtcccgt
aggaccaacctccgctcctccacctccagccagcgaagcttccacgacctgggctcctcc
cgcaactcggactacccctccagaacctcgccttctgactccaacccctgctcccccaaa
accagcctgagacgcatggagctgtccgggggagtggtaggaggtcgtgccctggaaaca
gcctccacccgccggaccgagatctccattgaggtgtcatccaagcagattgacagctcg
cccagcccgggtatcgcccgtttcggcctgaagaggcccgaggctcagagccttggttct
cgagccggagccgtcccagagagctccaccatctccagctccagctcggcacacagacgg
gcagagatctccctctctcggccccacgagccccccggggcacccaggaggggggactcc
cagcctccctcagccacccggatccctgacccccctcagaggaggaccgaccccaccatg
gtcagccctgtggagggccctacttccaggagacccgagaggcctgtcttccgacagcca
gagatggcagcaccacctccggtcagggtggtggagaacaacagccaccccccagcgccc
agtggccccctgcccagcctggtggagcccaggagcgagaggacacagcccctggtcagc
gagacgcccgtcgtcagacctatagagaggtcagaggtcactaccagctacaacagtaga
gccatgtctgaggtggccgtgcccgagatgatgatgccacccccggcggtgcccgcagcg
tgccaggtggagaagcctgtgccaggtcctggcatgggggacttcagctatgtgggcatc
gatgccatcctagaacagatgcggaggaaggccatgaaacagggcttcgagctcaacatc
atggtagtggggcagagcggcctagggaagtccactctgatgaacactctgttcaagtcc
aaggtgagccgtaagtcagtgcaggccacgtcccaggagaagatccccaagaccatccat
atcaagtctgtcagccacgacattgaggagaagggggtgaggatgaaactaactgttatc
gacacgcccggcttcggggatcagatcaacaacgagaactgttggcagcccatcatgaag
ttcattaatgcccagtatgagcagtaccttcaggaggagatcaacatcaacaggaagaag
aggattccagactcacgggttcactgctgtatttacttcataccccctactggacactgt
ctgcgacctctggatgtggagtttatgaggcgtctcagtaaggtggtcaatattgttcct
gtcatcgccaaggcagacacactcaccctggaggagagggacttctttaaacagaagatc
agggaagagctacgggccaatgggatcgacgtgtacccccagaaggagtttgacgaggac
gcagaggaccggatgattaatgacaagatcagggagatgatcccgtttgctgtggtgggc
agcgaccaggagtaccaggtcaacggcaggaggcttctgggaagaaagacaaagtgggga
accatagaagttgagaacattgctcattgtgagtttgcctatttgcgggatctactgatt
aggacccacatggagaacatcaaggacatcaccagcagcatccactatgaggtgtaccgc
gtccgccgcctcaacgaaaacaacactgccgtcgcccatgccaacggcctcccccaacac
cacatgacctcccatgagatgtag
DBGET
integrated database retrieval system
