Salvelinus fontinalis (brook trout): 129833845
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Entry
129833845 CDS
T11136
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
sfon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129833845
03015 mRNA surveillance pathway
129833845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129833845
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129833845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
RRM_5
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
129833845
NCBI-ProteinID:
XP_055754652
LinkDB
All DBs
Position
34:complement(38071642..38078085)
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AA seq
272 aa
AA seq
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MAPSPTKRKEEEKSKDRGKEKTATKEGGDKERGREKGHKRRSASTGSSSSSSSSSGSSSG
SSSGSSSSGTSRSGSSRSSSSSSSSSSGSPDPGRRRHDNRRRSRSASKTQKKGDDKERRR
RSPSPKPTKVHLGRLTRNVTKDHIQEIFATYGKIKMIDMPVERLHPNLSRGYAYVEFETP
EEAQKALKHMDGGQIDGQEITTSAVLAPRIRPPPRRQSPPRRMPPPPPMWRRTPPRMRRR
SRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcacccacaaagcgtaaggaggaggaaaagtcaaaggacaggggaaaagag
aagactgccactaaggaagggggggacaaggagagaggcagggagaagggccacaaacga
cgcagtgcatccactgggagcagcagcagctccagcagcagctctggctccagctctggt
tcctccagcggctctagttcctctggcaccagccgctctgggtcttcccggtccagctcc
tccagctcatctagttcctctgggtcgcccgatcccggccgccgccgccacgacaatcgt
cgccgctcccgctccgcgtccaaaacacagaagaagggagatgacaaggagcgaaggaga
aggagcccgagccccaagcccaccaaagttcacttaggaagactgaccagaaatgtgacc
aaggaccacatccaggagatctttgccacctatggcaagatcaagatgattgacatgcca
gtggagaggctccacccaaacctgtcccggggctacgcctatgtggagttcgagactcca
gaggaggcccagaaggccctgaaacacatggatggtggtcagattgatggtcaggagatc
accacctctgctgtgctggctccaaggatacgccctccccctcgcagacagtcaccccca
cgcagaatgcccccacctccccccatgtggcgccgcaccccacctcgcatgaggagaagg
tctcggtcaccaaggagacggtcccccgtgcgccgacgctccaggtccccggggcgcaga
cgtcatcgttcccgctccagttccaactcctcgcggtag
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