Salvelinus fontinalis (brook trout): 129833893
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Entry
129833893 CDS
T11136
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129833893
04020 Calcium signaling pathway
129833893
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129833893
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129833893
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
TMEM208_SND2
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
129833893
NCBI-ProteinID:
XP_055754708
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Position
34:complement(100206..201421)
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AA seq
1919 aa
AA seq
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TLQIGSFFMINLCLVVIATQFSETKQREHQLMQEQRAQCLSSSTLASLHEPGDCYEELFQ
LVCHMLRKARRRSVALYNQLRGRPLPPPPTRGRGRGGGRGGGEGGGSANGGERHHLRQPR
QSHCPHQSKLDSVHSSQPLGNSIALAVPQNTEDCPQCATALSLREGAGAVGDSANGEEEG
AVEETDREENHLEEKAEEGEGVKKKRKRRSCFGHCKDMWDEMRKKLWGIVESKYFNRGIM
IAILINTISMGIEHHNQPEELTNVLEISNIVFTSMFTLEMILKLTAFGFFAYLRNPYNIF
DGIIVIISVCEIIGQSDGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNVATFCM
LLMLFIFIFSILGMHIFGCKFSLKTETGDTVPDRKNFDSLLWAIVTVFQILTQEDWNMVL
YNGMASTSPCAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSEDDRSSCNFDE
NSDKLKDSLHLSDPKICTLTPNGHLDLSPTPTGLYTSDRLTFALGSRKNSVISLGRANLE
GRANLEGRILCRGSSSLYHNWGRPASQTQAIWGRRSSWNSLGRPSRALGLGLGVGGGGSL
RSRSPHATHPAEQESLLSPPHPPPHLTHPPPLLALNFVPRRDRRALSLELPELLQVPGTP
LASMLPCPRKKSFSSGLVGGGAGGEHQDCNGKAPSAQLQLQLQLPPHPHPHPQLLTEVFP
QVNTRKDREDLDDDIDYSLCFRIQKMMEVYRPEWCETREDWSVFLFSPQNRFRRVCQSII
AYKMFDYVVLAFIFSNCITVALERPKIMQGSLERVFLTISNYVFTAIFVAEMTLKVVSMG
LYIGEQAYLKSSWNVLDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRA
PGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCFGPDVKNITNKSDC
LQANYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGVDQQPVINNSPWMLL
YFISFLLIVSFFVLNMFVGVVVENFHKCRQNQEVEEAKRREDKRRRRMEKKRRDAQKIPY
YASYSPIRLWIHTLCTTYYLDLFITFIICINVITMSLEHYSQPRSLDLVLKYCNYFFTST
FVLETLLKLTAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIDYSASLPINPTIIRIMRV
LRIARVLKLLKMAKGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNED
YPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDYGPDYSCNPSLQFIS
PMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAKEEAEMDAEIELELATGALCCMGPEG
VCAGGKKGGGAGGGGGGEERGMGVPGSSSGGNMHHHVAMTHPGTLQDPNNRDPYSPAQES
QWLDSVSLLIKDSFEGEMLMIDNLSGSVFHHYSSTSPPAWKDCKSHPQLEQIRLAEIEQA
SLRSDQMSDKSSSPALPDDLSLDDQSVHQLLVREGKEERGSDSQGSEEAGGGGDSLTQAQ
TGGSRRCRAHSSVAEERAPLLVEVGVHQRHKTPSHHSPGGTSCSSTKAGEGSDEGVRGGG
RVGAASASGSPALIHLPAEFFHPVAAATLPAPPRARVGRTSRGLRLTSPASWSSLRSPGA
HSRVLCTQYPSHSDSSLATGSSDGSLQTTLEEGLSFSVSPPQDLASPLPPLPLHCPPLPE
DPTSCPAGQTLRPRPSPSSGPALTLQATRGHQRSQSSGRGSISPGYTREDSMDPVPCDLE
DLGIGISSSIGGCGSSQAGNSEHLSETLSSLSLTSLLSPASLAPPGVKKCNSTGSLNQGA
RRGEGRQILGLELDHQGFLANPWGESGGGRGEEGQLGEAPGLKGKSSSQTTVGSCSKNR
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
actttgcagattggctcgttcttcatgatcaacctatgtctggtggtcatcgccacccag
ttcagtgagaccaagcagcgggagcaccagctgatgcaggagcagcgggcccagtgcctg
tcctcctctaccctggccagcctgcatgaaccgggggactgctacgaagagctcttccag
ctggtctgccacatgctgcgcaaggcccgcaggagatctgtagccctgtataaccaactg
aggggaaggcctctgccaccaccacccactagagggagaggaagaggaggaggaagagga
ggaggggaaggaggagggagtgcgaacggaggggaacggcatcacctgaggcagccacga
caatctcactgtcctcaccaaagcaagctggactcagtccacagctcccaacccctgggc
aactccatcgccctggccgtccctcaaaacacagaggactgccctcagtgcgctacggca
ctgtcactcagggagggggcgggagctgtgggcgactcggccaatggggaggaggagggg
gccgtggaggaaacggacagggaggagaaccacttggaggagaaagcggaagagggggag
ggagtgaagaagaagaggaagaggaggtcgtgttttggacactgtaaggacatgtgggat
gagatgaggaagaaactttggggcatcgtggagagcaaatacttcaatagaggaatcatg
atcgctattctcatcaatactatcagcatggggatagaacaccacaaccagccggaggag
ctgactaacgtgttggagatcagtaacattgtgttcaccagtatgttcaccctggaaatg
atcctcaagctgaccgcctttggcttcttcgcctacctgaggaacccctacaacatcttc
gacggcatcatcgtcatcatcagtgtgtgtgagatcataggtcagtctgatggaggtctg
tctgtcctgaggaccttcagactgttgagggtgatcaagctggtgcgcttcatgccagcg
ctacgcagacagctggtggtgctgatgaagaccatggacaacgtggccaccttctgcatg
ctcctcatgctcttcatattcatcttcagtatcctggggatgcatatctttggctgtaag
ttcagtctgaagacagagactggagacactgttcctgacaggaagaactttgactctcta
ctgtgggccattgtcactgtgtttcagattctgactcaggaagactggaacatggtgctg
tataatggaatggcctccacctccccctgtgctgctctctactttgtggctctaatgacc
tttggcaactacgtcctcttcaacctgctggtggccatcttggtagagggctttcaggct
gagggggatgccaaccggtcgtactccgaagacgacaggtcctcgtgtaactttgacgag
aactctgacaagctgaaggactcgcttcatctctctgaccctaagatctgcaccctaacc
cccaacggtcacctggacctgtccccaacgcccacgggtctgtacacgtccgacaggctc
actttcgctctgggctcacgcaaaaacagtgtcatctctctgggcagggctaacctggag
ggcagggctaacctggagggcaggatcctgtgtcgggggagcagctccctgtaccacaac
tggggccgccctgcatcccagacccaggcaatttggggccggcggtccagctggaacagc
ctgggtcgcccctcccgagccttgggactgggattgggggtaggaggagggggtagcctg
cgttcccgcagcccccacgccacccacccggccgagcaggagtccctcctctccccccct
caccctcctccgcacctcacccaccctcctcccctcctggcgctaaactttgtcccgcgg
cgggaccgccgggcactgtccttggagctgccggagctcctccaggtcccgggaaccccc
ctggcgtcaatgctaccttgccccaggaagaagagcttctccagtgggttggttggtgga
ggggctgggggggagcaccaggactgcaatgggaaggccccatcagcccagctccagctt
caacttcagctgccgccacatccacatccccatccacagctactgacagaggtgttccct
caggtcaacacacgcaaggacagagaggacctggacgatgacattgactatagtctgtgt
ttccgtatccagaagatgatggaggtgtacaggccagagtggtgtgagaccagagaggac
tggtctgtcttcctcttctctcctcagaacaggttcaggcgggtatgccagtccatcata
gcctacaagatgtttgactatgtggtgctagcgttcatcttctccaactgcatcaccgtg
gctctggagagacccaagatcatgcagggcagcctggaaagagtcttcctaaccatctcc
aactacgtcttcacagccatctttgtagcagagatgacgctcaaggtggtgtctatgggc
ctgtatataggggaacaggcatatctgaaaagcagctggaacgtgttggacggcttcctg
gtctttgtgtcgttgattgacattgtggtgtcaatggcgggcggggctaagattctgggg
gtactgagggttctccgattgctccgcacactgcgccccctcagggtgatcagtcgagcc
ccaggtctgaagctggtagtggagactctaataacgtctctgaaacctataggaaacatt
gtccttatctgctgtgctttcttcatcatatttggtatcctgggggtgcagctgttcaaa
gggaagttcttctactgctttggccccgacgtcaagaacatcaccaacaagtctgactgt
ctgcaggccaactacaaatgggtccatcacaagtacaactttgacaacctgggacaggct
ctgatgtccctgtttgtgctggcttcaaaggacggctgggtcaacatcatgtaccatggc
ctggatgctgtaggggtggaccaacagccagtgatcaacaacagtccatggatgctcctg
tacttcatctccttcctcctcatcgtcagtttcttcgttctcaacatgtttgtgggcgtg
gtagtggagaacttccacaagtgccgtcagaaccaggaagtggaagaggctaaaaggaga
gaggataaacgacggagacgcatggagaagaagaggagggacgcccagaagatcccctac
tatgccagttacagccccatccgcctgtggatccacactctgtgtaccacctactacctg
gacctcttcatcaccttcatcatctgtatcaacgtcatcaccatgtcactggaacactac
agccagccacgatctctagatctagtgttgaagtactgtaactatttcttcacatccacc
tttgtactggagaccctcctgaagctcaccgcctttggcttccgacgcttctttaaagac
aggtggaaccagttggatctggccatcgtgttgctgtcagtgatgggcatcactctggag
gagatcgactacagcgcttctctccccatcaaccctaccatcatacgcatcatgagggtg
ttgaggatcgcacgagttctgaagctgctgaagatggctaaaggaatgagagctctgctg
gatacggtggtccaagccctaccacaggtggggaacctgggcctgctcttcatgctcctg
ttcttcatctatgcagcactgggggttgagctgtttggagaactggtgtgtaacgaggac
tacccatgtgaggggatgagccgccatgctacctttgagaactttggcatggccttcctc
actctgttccaggtctccactggggacaactggaatgggatcatgaaggacacgttgagg
gagtgccctccggactacgggcctgactactcctgcaaccccagcctgcagttcatctct
cccatgtactttgtgtcctttgtgttgacggcccagttcgtcctgatcaacgtggtggtg
gcggtgttaatgaagcacctggacgactccaacaaggaggccaaggaggaggcggagatg
gacgctgagattgagctggagctggccacgggggccctatgctgcatggggccggaggga
gtctgtgcaggagggaagaaaggtggaggagcagggggaggtggaggaggagaggagaga
gggatgggagtcccaggcagttcctccggggggaatatgcatcatcacgtggcaatgacg
catccaggaacactgcaagatccgaacaatcgtgatccctactctcctgcacaggagagt
cagtggctggacagtgtgtctctgctgattaaggactcatttgaaggagagatgctgatg
attgacaacctctctggatctgtcttccatcactactcttctacctctcctcctgcctgg
aaggactgtaagagccacccacaactagagcagatccggctggcagagatagagcaggca
tctctgaggtcagaccaaatgtcagacaagtcgtcgtctccggccctacctgatgacctc
agcctggacgaccagagtgtccaccagctgctggtgcgggagggaaaggaggagaggggc
agtgactcccagggctcagaggaggctggtggaggaggggactccttgacccaggcccag
acaggggggtcaaggcgctgcagggcccacagttcagtagccgaggagagggctccgctt
ctggtggaggtgggggtccatcagagacacaagaccccatcccaccacagccctggtggc
acctcctgcagtagcactaaggcaggagaaggatcagatgagggagtaagaggaggagga
agagtaggagcggccagtgcctctggttctcctgctcttatccatctgccagcggagttc
ttccaccctgtggcagcagcgaccctgccggcaccccccagggccagagtagggcgcacc
tcgcggggcctcagactcacctccccggcctcctggtcctccctgcgctccccaggagcc
cacagccgggtgctctgcacgcagtacccgtcccatagtgactcgtctctggccacgggg
agctccgatggcagcctccagaccaccctggaggaaggactcagcttcagtgtttcgccc
cctcaagacctggcgtcccccctccctcctctccccctgcactgccccccgctccctgag
gaccccaccagctgcccagcaggccagactctgagaccgcgacccagcccctcgtcagga
cctgccctcaccctccaggccactcggggccaccagcggagccagagcagcggcaggggt
agcatcagccccggctatacccgggaggactccatggaccccgttccatgtgacctggag
gacctgggcatcgggatcagttcgtccatcggggggtgtggctccagccaggcgggcaac
agcgaacacttgtcagagacgctaagcagcctgtcgctcacatcgttgctctcgcccgcc
tccctggcacccccgggggtgaagaaatgcaacagcacggggagcttgaaccagggggcg
aggaggggggaggggagacagatcctagggttggagttggaccaccagggcttcctggcc
aacccttggggagagagtgggggaggcagaggagaggagggacagttgggagaggcgccg
ggcctcaaggggaaaagctcaagccaaacaacagtagggtcctgtagtaaaaacagatga
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