Salvelinus fontinalis (brook trout): 129833990
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Entry
129833990 CDS
T11136
Name
(RefSeq) pre-mRNA splicing regulator USH1G-like
KO
K21878
Usher syndrome type-1G protein
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129833990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129833990
Cilium and associated proteins [BR:
sfon03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129833990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
SAM_7
Motif
Other DBs
NCBI-GeneID:
129833990
NCBI-ProteinID:
XP_055754783
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All DBs
Position
34:complement(36250417..36275039)
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AA seq
484 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVGRGGNPDK
CDIWGNTPLHLAAANGHHNCLSFLVSFGANMWCLDNDYHTPLDMAATKSHMDCVRYLDSI
AAKQSALNPKLVGKLKERAFREAERRIKECVKLQRKHHKRMERKFHKEAASEQSMSDAMS
FSSYTSSSVSRKLHHLNTTTVSVPYSQATLHATTRGKTKIQKRLEKRKQGDGTFKIYEDG
RKSVRSLSGLQLGNDVMFLKQGTYVGPRDRTGRRGNLRDIFHGDANDDAISRAISEPDLS
YRPNMEYSEVSTDSGHDSLFNRPGLGTMVFRRNYISGGLFGIGGRDEGSLSGGTERAGSA
NVRLRSRLRRSPSLDDGGDSIGSARSLQERNRQDLPWDEVELGLDDDCEAVTSPLEVFLA
AQTMGEFLTVFRREKIDLEALLLCSDQDLKSIHIPLGPRKKILDACKRRLETLEDPDYIE
DTLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtatcacaaggcggcccgggatggctacctggacctgctgaaagaggct
acgcggaaggacttgaacgcgccggatgaagatggcatgacaccgacgttatgggccgct
tatcatggcaacttggaggctctacgacttatcgtgggcagaggaggcaaccctgataag
tgtgacatatgggggaacacacctctccacctggcagccgccaacggccaccacaactgc
ctgtccttcctggtgtccttcggtgccaacatgtggtgcctggacaacgactaccacacg
cccctggacatggccgccaccaaaagccacatggactgtgtccgctacctggactcgatt
gccgccaagcagtcggcccttaaccccaagctggtggggaagctgaaggagcgggctttc
cgcgaggccgagaggaggattaaggagtgtgtgaagctgcagcggaagcaccacaaacgc
atggagcgcaagtttcacaaagaggcggcgtcggagcagtccatgtcagacgccatgagc
ttctccagctacacaagcagctcagtgagccgcaagctgcaccacctaaacaccaccact
gtcagtgtgccatactctcaggctactcttcacgccacaacccgaggcaagaccaagatc
cagaagaggttggagaagaggaagcaaggggacgggaccttcaagatctacgaggacggc
aggaagagtgtgcgctccctctcgggcctccagctgggcaacgatgtcatgttccttaaa
cagggaacctatgtcggccctcgggaccgcacagggcgccgcggaaacctccgagatata
ttccacggagacgccaacgacgacgccatctctcgtgccatcagcgagccggacttgtct
taccggcccaacatggaatactctgaggtcagcaccgactcgggccacgactctctcttc
aaccggcccggtctgggaaccatggtgttccgacgcaactatatcagcggcggtctgttc
ggcatcggcgggcgcgacgaggggagcctcagcggaggaaccgaacgggctggcagcgcc
aacgtgcggttgcgcagccggctgcggcgttcgcccagcctggacgatgggggggacagc
atcggcagtgcccgcagcctccaggaaaggaaccgccaggatcttccctgggacgaggtg
gagctggggctggatgatgactgcgaggccgtcaccagcccgttggaggtgttcttggct
gcgcagactatgggcgagttcctcaccgtcttcaggcgggagaagattgacctggaggcg
ctgctgctgtgctcggaccaggacctcaagagcatccacatccccctggggcccaggaag
aaaatcctggatgcctgcaagagacgtctggagacccttgaggaccctgactacatcgag
gacaccctgctgtga
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