Salvelinus fontinalis (brook trout): 129834011
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Entry
129834011 CDS
T11136
Name
(RefSeq) pseudouridylate synthase TRUB1-like
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129834011
Enzymes [BR:
sfon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
129834011
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
129834011
Prokaryotic type
129834011
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
129834011
NCBI-ProteinID:
XP_055754808
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All DBs
Position
34:35974434..35975919
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AA seq
300 aa
AA seq
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MAGTVTGVAVPKHSLSKLQSLNGLFAIYKKEGPTSADVLNSLKEALLKEAGVKDPNPRKR
KKQALKMGHGGTLDSAASGVLVVGIGNGTKMLSTMLAGSKKYMAVGELGKATDTLDATGK
VVHEKPYDHITREAFEEKLKQFTGDIMQVPPLYSALKKDGKRLSVLLKQGHEVEAKPARP
VTVYNLSLQDFTPPLFTLDVECGGGFYIRSLVDDLGKALSSCAHVRKLIRTKQGQFTLDD
HTLQEEHWTLQHIVQSMQPCPGSEVTNEDGTKPSPNLGVKRATNAQVKGDKNGKDEKGEF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggctggtacagtaactggcgtagctgtgcctaaacattctttatcaaaactacaatct
ttaaatggactgtttgccatttataaaaaggaaggacctacgtctgctgatgttttaaac
tcattaaaagaggcactcctcaaagaggcaggtgtgaaagatcctaatcccagaaaaagg
aagaagcaagctctgaaaatggggcatggcgggactctggacagcgcagcctctggtgtg
ctcgttgttgggattggaaatggaacaaagatgcttagtactatgcttgctggttcaaag
aaatacatggctgttggagagttgggaaaagcaacagacacccttgacgccacaggcaag
gtggttcatgagaagccctatgatcacattaccagagaagcctttgaggagaagttgaag
cagttcactggggacatcatgcaggttcctccactgtactctgcgctgaaaaaggatggc
aagcgtctttctgtcctgctgaagcaaggccacgaggtggaagccaaacctgcacggccg
gtcacagtgtataacctgtcgttgcaggacttcactccccctctcttcactcttgatgtt
gaatgcggtggtggattttatatcagaagcttggtggacgacctgggaaaagcactctcg
tcgtgtgcccacgtgaggaagctgatccggaccaaacagggtcagtttacccttgacgac
cacacgctgcaggaggaacactggacactgcagcacatcgttcagtccatgcagccctgt
cccgggtcagaggtcaccaatgaggatggcacaaaaccaagcccaaacctgggggttaaa
cgggccacgaacgcccaggtgaagggggataagaatggcaaagatgaaaagggggagttc
taa
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