Salvelinus fontinalis (brook trout): 129834192
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Entry
129834192 CDS
T11136
Name
(RefSeq) cadherin-5-like
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04514
Cell adhesion molecule (CAM) interaction
sfon04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129834192
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129834192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129834192
04090 CD molecules [BR:
sfon04090
]
129834192
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Major cadherins
129834192
CD molecules [BR:
sfon04090
]
Proteins
129834192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
129834192
NCBI-ProteinID:
XP_055754906
LinkDB
All DBs
Position
35:1907810..1920985
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AA seq
765 aa
AA seq
DB search
MMRQSAWRQMTGPDMWMGLFALAVTLGLTMAEHMDQRPALQTSPVLHRNKREWLWNNLYV
EEERPIDKQYYIGKLKSTKAGDRTRYVIKGDGANTIFKVDEKGDIYVTERLDREVKSIYH
LSAELLNTRDIPFEKVEEFVILVTDINDNDPVFTKSFNASIKERSKRGTKVIEVTATDAD
DPTTANGELAYTLLEGGDFFNIDSTTGIITTKYENLDRETQSSYVVVVQAQDLRGLKQGG
TATTSVTIAVSDINDNIATFTKSSYVFSVKEDMKRGQRIDTIVLEDRDEIQNKDPIFTLE
SPSDTFEMERSQIKDGNLMLKQGLDYETKSSYTFSVHVRENNLQSPADNKDNPVIKAQVT
IQVLDVDEQPEFSKSIYNFNVIEEMMVNNIGVISARDPDKANKAIRYSIEDKDSPIGINP
ITGQLFTVRKLDRELVANHMFQVKAKEEPNGLESFVNVNILVIDINDNKPELSIEEIFVC
ENDMAGTVIGTISATDKDENVPSFSFTLVKPNGNFSVINNNDNTSNIVLKHGGFSLEDSR
DYVIEIGISDGGRPPMSSITSLPIKVCRCDNKRIHTQCKAAQLKMGVGVYTLIPILCILT
ILVIVILIAMRKRHQKDALVTLGKSEIHEQLVTYDEEGGGEMDTNGYDVSILTSARNDSS
MSMRQGPSLYAMVKKPPTACKGDMAVMIEVKKDEADHDRDGIPYDTLHIYGYEGPESLAG
SLSSLDSSSTGSSLDYDFLNDWGPRFRTLAELYGVDGSEGSDSLY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgatgagacagtctgcatggaggcagatgactgggccagatatgtggatgggtctcttt
gccttggccgtgaccctcggtctaaccatggctgaacatatggaccagaggccagcactc
caaaccagccccgttctccacaggaacaagagagagtggttgtggaacaacctttacgtg
gaggaggaaaggccaatcgacaaacaatactatattggaaagttaaagtcaactaaagct
ggtgacaggacacgctatgtcattaaaggagatggtgccaacacaatcttcaaagtggat
gaaaaaggagacatctacgtcactgaacgattggatcgagaggtgaaaagcatataccat
ctaagtgcagagctgcttaataccagagacatcccgttcgagaaagtggaagaatttgtg
atcctggttaccgacatcaatgacaacgatccagtgtttactaaatcgttcaacgcttct
atcaaagagagatccaaaagaggcactaaagtgatagaagtcactgccactgatgcagac
gatccaacgacggcaaatggagaacttgcttacacattactagaggggggagacttcttc
aatatagacagcacaacagggattatcaccaccaagtatgagaacctggaccgtgagacc
cagagtagctatgtggttgtggttcaagcccaggatctgagaggacttaaacaagggggc
accgccaccacctctgtcaccatcgcagtcagcgacatcaatgataacatagccacattt
accaaaagttcctatgtatttagtgtgaaagaggacatgaagcggggacagagaatagac
accatagtcctggaggacagagatgagatccagaataaagacccaatcttcaccctagaa
tctccatcagacacctttgagatggagcgcagtcagatcaaagatggcaacctcatgctg
aaacagggactggattatgaaaccaagagcagctacacgttcagtgtgcacgtgagggag
aataacttgcagtcccctgcggataataaggacaatccagtgatcaaggcccaggtgacc
atccaggtgctagacgttgatgagcagccagaattcagcaagagcatctacaactttaat
gtgatagaggaaatgatggtcaataatattggagtcatttcagccagagatcctgataaa
gccaacaaggccataaggtattccattgaggacaaagacagtcccattggtatcaacccc
ataactggacaacttttcacagtgaggaagctggatcgggagcttgtagcgaatcacatg
ttccaggttaaagctaaggaggaaccaaatggactggaatcttttgtgaacgtcaacata
ctggtcattgatatcaatgacaacaaaccagagctgtccattgaagagatattcgtttgt
gaaaatgatatggctggcacggtgattgggaccataagtgccacagacaaagacgaaaat
gttccctcattcagcttcacattggtgaagccgaatggcaacttttcagtcatcaataac
aacgacaacacatcgaacatagtcctgaaacatggaggcttcagcctggaggactccagg
gattatgtaatagagattgggatcagcgatggaggcaggcctcccatgagcagcatcacc
tctctgcctatcaaagtgtgcaggtgtgacaacaagaggatccacacccagtgcaaagca
gcccaactcaaaatgggtgtgggcgtctacaccctgattcctatactgtgcatcctgact
attctggtcatagtgatcctgatcgctatgagaaagcgtcaccaaaaggacgccctggtc
actctgggtaagagtgagatccacgagcagctagtgacatacgacgaggagggtggtggg
gagatggacaccaacggctacgacgtgtccatcctgacatcagctcggaatgacagcagc
atgagcatgaggcagggccccagcctttacgccatggtgaagaaaccaccaaccgcgtgc
aagggagacatggctgtgatgatcgaggtgaagaaagatgaagctgaccatgacagggat
gggattccctacgataccctgcacatctacggctacgaggggccagagtccctggctggt
agcctcagttccctggatagttcatccactggctctagccttgactatgacttcttaaac
gactggggccctcgcttcagaaccctggctgagctctacggggtagatgggtctgaggga
agtgactccctgtattga
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