Salvelinus fontinalis (brook trout): 129834316
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Entry
129834316 CDS
T11136
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase-like isoform X1
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00860
Porphyrin metabolism
sfon00970
Aminoacyl-tRNA biosynthesis
sfon01100
Metabolic pathways
sfon01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
129834316
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129834316
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfon01007
]
129834316
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129834316
Enzymes [BR:
sfon01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
129834316
6.1.1.17 glutamate---tRNA ligase
129834316
Amino acid related enzymes [BR:
sfon01007
]
Aminoacyl-tRNA synthetase
Class I (A)
129834316
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
129834316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
tRNA-synt_2b
HGTP_anticodon
ProRS-C_1
tRNA-synt_1c_C
tRNA-synt_1c_C2
Arc1p_N_like
GST_C
GST_C_3
GST_C_2
Motif
Other DBs
NCBI-GeneID:
129834316
NCBI-ProteinID:
XP_055755165
LinkDB
All DBs
Position
35:complement(10060154..10122128)
Genome browser
AA seq
1654 aa
AA seq
DB search
MALNLTINSSNPPLGALLAAEHVKGSVNLSVDEGKDNKLRVSESVQFSDVNSITRYLARV
TPTLSLYGSNMLEQTEVDHWLEFSTRRVCGQSGLATALEELDKALALRTFLVGHSLTLAD
LCVWAALKGSNEWQSIQKQAGAFSHVARWFSFLGSQVPFTAVGNKYANSKAPPHKSDEKK
QDLGKFVELPGAEMGKVVVRFPPEASGYLHIGHAKAALLNQHYQVTFKGKLIMRFDDTNP
EKEKEDFEKVILEDVAMLQIKPDQFTYTSDHFPRIQGMAEQLLREGKAYIDDTPPEQMRA
AREQRTESRHRSNSVEQNLKMWEEMKAGTEYGQTCCMRAKIDMASNNGCMRDPTLYRCKN
APHPRTGSTYRVYPTYDFACPIVDSVEGVTHALRTTEYHDRDDQFYWVIEALGLRKPYVW
EYARLNLNNTVLSKRKLTWFVDQGYVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGGS
RSVVNMEWDKIWAFNKKLPISCIKVIDPVAPRYTALSGSYSVPVIIPEATEEMKEAVKHP
KNTEVGMKAVWYGPRVLVEGADAETFTKGEIVTFINWGNIIITQIHKDASGKVTSLDGKL
NLENKDYKKTTKITWLAETPRAPLLPTVCVNYQHLITKPVIGKEDDFKEYINKQSKLEEK
MLGDPCLKDLKKGDIIQLQRRGFYICDQPYEPISPHSCKESPCVLLFIPDGHTKEMPTAG
SKEKCKATTTTAPFPATCQGAPVSAPASDACAVFFGIVAQGEKVRDLKTAKAPKEKVDKV
VKELLSLKAQFKQLTGQDYKPGMAPPASSTTQKAATPAPSADSTSTFACITQQEELRSEK
ASKVDAVVKQLPDFTAEFHQITGKENKPGMTPPSAAQAKTALSASSPPSSPSGLYERVTE
QGDTVRKLKSEKSAKDQVDAAVKQLLDLKAEYKQATGQDYKPGTSPVPAAAPVQSTQAPP
VTSGSGIYEHVTQQGDLVRKLKSEKAPKDQMDTAVKHLLSLKAEYKQVTGQDYKPGMAPA
TSPAPVQASPAPKAQSSSSIKVLFSQVSHQGELVRKLKSEKAPKDQLDGAVKQLLGLKTQ
YKALTGEEYKPVASAGASGGEDKNGKDRENKSEKQGGGSGGGGGKKQPKGDKVKEVSSGG
AGGGGGEGGPKKQTRLGLEAKKEENLSDWYSQVITKAEMIEYYDVSGCYVLRPWSYSIWE
SIKEFFDREIKKLGVENCYFPMFVSQAALEKEKSHIADFAPEVAWVTRSGNTELAEPVAI
RPTSETVMYPAYSKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHTAFAT
KAEATEEVLQILDLYARVYEELMAIPVVKGRKTEKEKFAGGDYTTTVEAFISASGRAIQG
ATSHHLGQNFSRMFEIVFEDPKKPGEKQLAYQNSWGITTRTIGVLTMVHGDNMGLVLPPK
VACLQVIIIPCGITASLPEAEKEVLLAQCSKYLARLQRGEIRVKADLRENYSPGWKFNHW
ELKGVPIRLEVGPKDLKQGQCVAVRRDTGEKITLPEADTEKRLTQLLEDIQTNLFKRASD
DLNKHMVVADSMEQFQTDLDQGRIVQIPFCGGIECEDWIKKTTAKDQDLEPGAPSMGAKS
LCIPFKPLQPLQPGQMCVSGKEAAQYYTLFGRSY
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaaccttaccatcaacagtagcaaccctcctttaggggcgctgttggcagct
gagcatgtgaagggcagcgtgaacctgtctgtggatgagggcaaagacaacaagctccgt
gtctcagagtcagtgcagttcagcgacgtgaactccatcactcgctaccttgcccgtgtg
actcccactctgagcttgtacggctccaacatgctggaacaaactgaggtggaccactgg
ctggagttcagtacgcggcgcgtgtgtggacagtcgggcctagctacagccctggaggag
ctggacaaggccttggctctgcgcacattcctggtgggccacagcctgactctggccgac
ctctgtgtgtgggccgcgctcaaaggtagcaacgagtggcagtcaatccagaagcaggcg
ggggcgttctctcacgtggctcgctggttttccttcctaggctcccaggtgccctttact
gcagtgggcaacaagtatgccaacagcaaggcccctcctcacaagtccgatgaaaagaag
caggacttgggcaagtttgttgaattgccgggagccgagatggggaaagtggtggttcgc
ttcccccctgaggccagcgggtatctgcacattggccacgccaaggctgccctgctcaac
cagcactaccaggtgaccttcaagggcaagctcatcatgcgcttcgacgacaccaaccca
gagaaggagaaggaggactttgagaaggtgatcctggaggacgtggccatgctgcagatc
aagcctgaccagttcacctacaccagcgaccacttccctcgcatccagggcatggcggag
cagctgctgagggaaggcaaggcctacatcgacgacacgcccccagagcagatgagggcg
gcgagggaacagcgcaccgagtcccgccaccgcagcaactcggtggagcagaacctgaag
atgtgggaggagatgaaggcgggcacggagtacggccagacgtgctgcatgcgggccaag
atcgacatggcctccaacaatggctgcatgcgcgaccccaccctctaccgctgtaagaat
gccccccacccccgcactggcagcacctacagggtgtaccccacgtacgactttgcctgc
cccatcgttgacagtgtggagggcgtgactcatgcgctgcgcacaacagagtaccacgat
cgcgacgaccagttctactgggtgatcgaggcgttgggtctgcgcaagccctacgtctgg
gagtacgcccggctcaacctcaacaacactgtgctctccaagcgcaagctcacctggttc
gtagaccagggctatgtcgatggctgggacgaccctcgcttcccaactgtcagaggtgtc
ctgcgcagaggaatgaccgtcgagggcctcaagcagttcatcgctgcccagggtggatcc
aggtctgtggtcaacatggaatgggacaagatctgggccttcaacaagaagctgccaatt
agctgtatcaaggttatcgacccagtggcccccagatacacggccctgtcaggatcctac
tcagtccctgtcatcatccctgaggcaacagaggagatgaaggaggccgtcaaacacccc
aagaacacagaggtggggatgaaagcggtgtggtacggacccagggtgctggtggagggg
gcagatgcagagaccttcacaaagggagagatagtcaccttcatcaactggggaaacatt
atcatcacccagatccacaaagatgccagcggtaaggtcacctccctggacggcaaactg
aacctggagaacaaggactacaagaagaccaccaagatcacgtggctggccgagaccccc
cgcgcgcccctgctgcccaccgtctgcgtcaactaccagcacctcatcaccaagcctgtc
ataggcaaggaggacgacttcaaggagtacatcaacaaacagagcaagctggaggaaaag
atgctgggagacccctgtctgaaggacctgaagaagggtgacatcatccagctgcagagg
cggggcttctacatctgtgaccagccctacgagccaatcagtccccacagctgcaaggag
agtccctgtgtgctgctgttcatccccgatggccacaccaaggagatgcccaccgccggc
tccaaggagaagtgcaaggccaccaccaccacagctcccttcccagccacgtgccaaggc
gctcccgtctctgccccagctagcgatgcctgcgccgttttctttggcatcgtggctcaa
ggtgagaaggtacgcgatctaaaaaccgccaaggcccccaaggagaaggtggacaaagtg
gtaaaggagctactgtcactcaaagcccagttcaagcagctgactggccaggactacaaa
ccaggcatggccccacccgccagctccaccactcagaaggccgcaacccccgcaccttct
gctgactccacctccacctttgcttgcatcacccagcaggaggagctgaggtcagagaag
gcctccaaggttgatgctgttgtcaagcagctgccggattttacagctgagttccatcag
atcacaggcaaggagaacaagccagggatgacccctccttctgctgcccaagccaagact
gctctctctgcctcatcccccccatcctctccctcaggcctatacgaacgtgtgaccgaa
cagggagacactgtgaggaagcttaaatctgagaaatcagcgaaggaccaggttgatgct
gcggtgaagcagctcttagacttgaaggcagagtacaaacaggcgacaggtcaggactac
aagccaggaacttccccagtccctgctgctgccccagtccagagcacccaagccccccca
gtcacatctggctcaggcatctatgaacatgtgactcagcagggtgacttggtgaggaag
ctgaaaagcgagaaggcccccaaggaccagatggacacagccgtcaagcatctgctgtca
ctcaaagcagagtacaagcaggtgactggccaggactacaaaccaggcatggccccagcc
accagccctgcccctgtccaggctagccccgcccccaaggcccagtctagctcctccatt
aaggtgctcttctcccaggtgtcccatcagggggagttagtgaggaagctgaaatcggag
aaggctcctaaggaccagctggatggtgccgtgaagcagcttctgggcctgaagacccag
tataaggccctcacaggagaggagtataaacctgtggcttccgccggagcctcgggcgga
gaggacaagaacggcaaagaccgagagaacaagtctgagaaacagggaggtggtagtggc
ggaggaggagggaagaagcagcccaagggagacaaagtcaaggaggtctcgtcgggaggc
gcagggggaggaggaggagaggggggtcccaagaaacagacacgactgggactggaggct
aagaaggaggagaacctgtctgattggtactctcaggtaatcactaaggcggaaatgatt
gagtactacgatgtgagcggctgctatgtgctgcggccctggtcatactccatctgggag
tccatcaaggagttctttgaccgcgagatcaagaagctgggcgtggagaactgctacttc
cccatgtttgtctcacaggctgccctggagaaggagaagtcccacatcgcggattttgcc
cccgaggtcgcctgggtgacgcgttcagggaacactgagcttgccgagcccgtcgctatc
cgacccactagtgaaactgtgatgtaccctgcctactccaaatgggtccagtcccacaga
gacctccccatcaaactcaaccagtggtgcaacgttgtgaggtgggagttcaagcacccc
caacccttcctgaggaccagagagttcctgtggcaggagggacacacggctttcgccacc
aaagcggaggccaccgaagaggtgttacagatcctggacctgtatgcgcgggtgtacgag
gagctcatggccatccctgtggtaaagggcaggaagactgagaaagagaagtttgccgga
ggtgactacactaccaccgtggaggccttcatctctgccagtggcagagccattcagggc
gccacgtcccatcacctgggacagaacttctcgcggatgtttgagattgtgtttgaggac
cccaagaagccaggtgaaaagcagctggcatatcagaactcgtggggtatcaccacccgc
accatcggcgtgctcaccatggtccacggtgacaatatgggcctggtgctgccccccaaa
gtcgcatgtctccaggtgatcatcatcccatgtggtatcacggcctccctgcccgaggct
gagaaagaggttctcttggcccagtgctccaagtacctggctcggctgcagaggggagag
atccgagtcaaggcagacctccgagaaaactactcccctggctggaagtttaaccactgg
gagctcaagggtgtgcccattcgtctggaagtgggtcctaaggacctgaagcagggtcag
tgtgtggccgtgaggagagacacaggggagaagatcaccctgcccgaggccgacacagag
aagaggctcacacagctactggaggacatccagaccaacctcttcaagagggcatcagac
gacttgaacaagcacatggtggtagcagactctatggaacagttccagacagatctagat
cagggcaggattgtccagatccccttctgtggaggaattgagtgtgaagactggatcaag
aagaccactgccaaggaccaggatctggagcccggtgccccctctatgggtgcaaagagc
ctgtgtatccccttcaagcccctgcagcccctgcagccgggccagatgtgtgtcagcggc
aaggaggccgcccagtactacactctgtttggccgtagctactaa
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integrated database retrieval system
