Salvelinus fontinalis (brook trout): 129834334
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Entry
129834334 CDS
T11136
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129834334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129834334
Membrane trafficking [BR:
sfon04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
129834334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
129834334
NCBI-ProteinID:
XP_055755205
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All DBs
Position
35:complement(13154043..13169274)
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQLEGEDAMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKY
KQIVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNLFLRSCADLHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KYFPPLFEYFDYESRKSMSCYVLSNTLDYNTTIIAQEQVDAILTLVSTLIQDQPDQPAED
PDPEDFAEEQSLVGRFIHLLLSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYL
LAFRYKENSSSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERTKCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRNTEKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVPVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPEAEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacacagcagtcaccccaggatgagcaggaaaagctacttgatgaagccgtg
caggctgtcaaggtccagtcatttcagatgaaacgttgcctggacaagaacaagctgatg
gatgcattgaaacatgcatctaacatgctgggggaactcaggacctccatgttatcgcca
aagagctactatgaactctacatggccatctctgatgagctccactacctggaggtgtac
ctgacagatgagtttgccaagggcaggaaggtggctgacctctatgagctggttcaatat
gcagggaacatcatccccagactttacctgctgatcactgtgggggtggtgtatgttcgc
tccttccctcagtcgcgtaaggacatcctgaaggacctggtggagatgtgtcgtggggtg
cagcacccgctgagaggcctcttcctcagaaactacctgctgcagtgcacccgcaacatt
ctgcctgatgacggggagcagctagagggggaggatgcgatgacgggagacattaacgac
tccattgactttgtgctgctgaattttgctgagatgaataagttgtgggtgcgcatgcag
caccagggccacagccgagacagggagaagagggagaaggagaggcaggagctgcgcatc
ctggtcgggaccaacctggttcgactcagccagctggagggggtcaacgtggaaaagtat
aaacagattgtgctgtccggtgtcctagagcaggtggtaaactgccgagattccctggct
caagaatatctcatggagtgcatcattcaggtcttccctgatgagttccaccttcagaca
ctgaacctattccttcgttcctgtgccgacctgcatcagcacgtcaatgtaaaaaacatc
atcatcgctctcattgacagactggctttgtttgctcaccgagaagatggacctggaatc
cctgctgaaatcaaactgtttgatattttctcccaacaagtagccacagttatacagtcc
cgccaggacatgccttcggaggatgtggtctcactacaggtgtccctcatcaacctggcc
atgaagtgctaccctgatcgggtagactatgtggacaaggtgttggagagcacagtggag
atcttcaacaagctcaacctggagcacattgcaaccagtagcgcagtctcaaaagagttg
actaggctgctgaagatcccagtggacacctacaacaacattctgactgttctgcagctc
aagtacttccctccgctcttcgagtactttgattatgagtcccgcaaaagcatgagctgt
tacgttctgagcaacactctggactacaacaccaccattatagcccaggagcaggtggat
gccatcttgaccctggtgtcgacactgatccaggaccagccagaccagcccgctgaagac
ccagacccagaggactttgctgaggagcagagccttgtgggtcgctttatccatctgctg
ctttccgacgaccccgaccaacagtatctgatcctgaatacagccaggaagcactttggt
gctggggggaaccagaggattcgctacactcttccaccgctggtgtttgctgcctatctg
ctggccttccgctacaaagagaactcttcatcagatgataaatgggagaagaagtgccag
aagatcttctcgtttgcccaccaaaccatcagtgctctgatcaaggctgagctggctgag
ctgcccctcagactcttcctacagggggcgctggccgcaggagagattggcttcgagaac
cacgagactgtggcctacgagttcatgtcacaggccttctccctgtatgaggatgagatc
agcgactccaaggctcagctagcagccatcacgctgatcatcggcacgtttgagagaacg
aaatgcttcagcgaggagaaccacgaaccgctgaggacacagtgtgcactcgccgcctcc
aaactgctcaagaagccagaccagtgtcgggccgtcagcatctgtgcacacctcttctgg
tccggacgcaacactgaaaagaatggagaggagattcgtgacgggaagagggtgatggag
tgcttaaagaaggccctgaaaatcgccaaccagtgcatggacccgtcattgcaagtgcag
ctcttcattgagatcctgaacagatacgtctgtttctacgaaagagagaatgatgcggtg
acggtcccggttctgaaccagctgatccagaagatccgagaggacctgccaaacctggag
gccagcgaggagacagagcagatcaacaaacacttccacaacacactggagcacctgcgt
ctgcagagagagtcgccggaggccgaggggcctgcttatgagggcctggtgctgtag
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