Salvelinus fontinalis (brook trout): 129834376
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Entry
129834376 CDS
T11136
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04371
Apelin signaling pathway
sfon04514
Cell adhesion molecules
sfon04520
Adherens junction
sfon05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129834376
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129834376
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129834376
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129834376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129834376
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129834376
04090 CD molecules [BR:
sfon04090
]
129834376
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
129834376
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Major cadherins
129834376
CD molecules [BR:
sfon04090
]
Proteins
129834376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
RibLong
DUF1366
Big_13
Cadherin_4
PKD_4
Motif
Other DBs
NCBI-GeneID:
129834376
NCBI-ProteinID:
XP_055755272
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All DBs
Position
35:15679406..15697132
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AA seq
879 aa
AA seq
DB search
MGAFWFVELGVLTLFLQAFKPGSSEESKCLPGFTSEMYIFKVERNHLQSGRRLGKVVFDD
CTSRTSFLFHSEDSRFKVDGDGTLKLKRGLTLHNGHKEFYVSTQSKGKKITVPVRVLHEA
RHGHHHEMTTQPQPGSSLSVPVLNLPKSSGGLKRRKRDWVIPPISFPENDRGPFPKNMVQ
IRSNNDKEVKILYSITGPGADQPPVGLFTVDKNSGTLYVTQPLDREKRDQYVLLAHAVAV
GAGTAEEPMEIIVKVIDMNDNKPVFTQNPFTGTVPEASKPGDEVFQVTATDADEEGSANS
DVRYTIISQEPPQPSPNMFVINPVTGVIRVNENGLDREKILKYTLEIQAADMEGEGLTSF
GKAIITVTDSNDNAPQFVTPLYTVSVPENKADALVVKMPVTDRDEPHSSAWATTFKIVDG
DPQGFFNVSTGPSKLEGIITTVKPLDFEKNNKYTLLVTVVNEVPFAAPLPTSTATVIVNV
EDVNEAPVFTPVEKIIRKPEDLPEDSDLVLYTATDPDTARNQKVTYKIRNDLAGWLSINK
DTGLIKVKAPMDRESTFVQDNKYSVVVLGTDNDEIPATGTGTLIIELEDVNDNPPTIDER
MIKVCNKESSPQLLSITDKDGADFAAPYTVELQGSSKSNWTARMNDTKTGIILTLKTMLD
SGDYTVVLRVSDTKGLHQESTIQASVCDCKGADVQCTDKAVAGFGLSSILGILGAILLLL
LLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNRPD
VFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSEA
GSLSSLNSSSSGDDQDYDLLQQWGPRFKKLSDMYGGGED
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggggccttttggttcgtggagttgggggtattaacattgtttctccaggctttcaaa
ccaggttcgtcggaggagtcaaaatgcctaccaggtttcacttcagaaatgtacattttc
aaagtggaaagaaatcacttacaaagtggccggagactaggaaaagtggtttttgatgac
tgcaccagccgcaccagctttctctttcactccgaggattcacgcttcaaagtagatggc
gacgggacgctgaaactgaagagggggctgactctgcataatggacataaggagttctat
gtctctacccagtccaagggcaagaagatcacggttccagtcagagtgctgcatgaggcc
agacacggccaccaccatgagatgaccacccagccccagcctggatcaagtctgtctgta
cctgttctgaacttgcctaagtcttcaggaggtctgaaaagaaggaagcgggactgggtc
attcctcccatcagcttcccagagaatgaccgaggccccttccccaaaaatatggtgcag
atcaggtccaacaatgataaagaggtgaagatcctgtacagcatcactggtcctggggca
gaccaacctcctgtgggactcttcactgtggacaaaaactctggaactctctatgtgacc
cagcctttggacagggagaaaagagaccaatacgttctcctagcccatgctgttgcagtg
ggtgcaggtacagctgaggaacccatggagatcattgtgaaggtcattgacatgaatgac
aacaaacctgtatttacccaaaatccatttacgggaacagtccctgaggcatcaaaacca
ggtgatgaggtatttcaggtaacagccactgatgctgatgaggagggctctgccaattct
gatgtcagatacaccattatcagtcaggagcctccacaaccaagccccaacatgtttgtc
atcaaccctgtgaccggagtgattcgggttaacgaaaatgggctggaccgagagaaaatt
ctaaaatatactttggaaatccaagctgccgatatggagggagaaggccttaccagcttt
ggcaaagccatcattacagtaactgacagcaatgacaacgcgccacagtttgtgacgcct
ttgtacactgtatcagtcccagagaataaagcggatgccttggtggtgaaaatgccagtg
actgatagggatgagcctcactcctctgcctgggccaccaccttcaagatagttgacggg
gaccctcaaggctttttcaatgtgagcacaggccctagcaagctggaaggcatcattacg
acagtaaagccccttgactttgagaagaacaacaagtacactctgttggtcactgtggtg
aatgaagtcccatttgccgcccccctgcccacctccactgctactgttatagtgaatgtg
gaggatgtgaatgaagctccagtcttcaccccagtggagaagattatcaggaaacctgag
gacctccctgaggacagtgacctggttctgtacacagccacagacccagacactgcaagg
aatcagaaagtcacatacaagatacgcaatgatcttgctggatggctcagtatcaacaaa
gacactgggctgatcaaagtcaaggcccccatggacagagaatccacttttgtccaagac
aacaaatactctgttgttgttctgggcactgacaacgatgaaatcccagcaactggcact
ggcacccttatcatagagctggaggatgtgaatgacaaccctccaaccatcgacgagagg
atgattaaggtctgcaacaaggagtcctccccacagctgctgtcaatcactgataaagac
ggagcggacttcgctgctccatacactgtagagcttcaggggtcgtccaaatctaactgg
actgccagaatgaatgacacaaaaactggcattatcctgacactgaagactatgttggat
agtggcgattacacggttgtcctgagagtgtctgacaccaagggcctgcaccaggagagc
accatccaggcctccgtgtgtgactgcaaaggagctgatgtccagtgcaccgataaagct
gtagcaggcttcggcctctcgagcattctgggaattctaggagccattttactactccta
ttgttgtctcttctgctgctcatgttcctgaggaagagaggtggtgagaagaaggagcct
ctgctgcaggaggacgatgtcagggacaacatctactactatgacgaggagggaggtggt
gaggatgaccaggatttcgacttgagtgttctgcacagaggtctggataaccgtcctgat
gttttccggaatgacatcgctccaaccatggcccggccagagtatcgcccacgacccgcc
aacccagctgacataggcaacttcattgatgataacctgaaggcagctgacaacgacccc
actgctcctccctacgactccctcctggtgtttgactatgaaggaggtggctctgaggcc
ggctccctcagctccctcaactcctccagctcaggagatgaccaggactacgatctcctt
caacagtggggcccgcgcttcaagaagctgtctgacatgtacggcggaggagaggattga
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