Salvelinus fontinalis (brook trout): 129834453
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Entry
129834453 CDS
T11136
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129834453
04091 Lectins [BR:
sfon04091
]
129834453
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129834453
Lectins [BR:
sfon04091
]
C-Type lectins
Others
129834453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
PH_24
Motif
Other DBs
NCBI-GeneID:
129834453
NCBI-ProteinID:
XP_055755421
LinkDB
All DBs
Position
35:complement(18888588..18910000)
Genome browser
AA seq
2187 aa
AA seq
DB search
MLRSSGFQWEATSNCSQELHFICQFVQKNIILQKAIGEFGIIKCYSLNQSTDGANCKALY
GSPLQIQVEVETGTNVTYKIHSGEMLVANSSAVRGIVPHNITVGPEVEQQLGSGCHQLTL
HASNGVSVLGVSTELQVCLLEPVEGLLGSVMAEGGCPDSDLYVSVSLDRGAPVQLLFQVS
GANSSISETRDMQNNSMQVYNISTTIQGFLQVKVRAWNVFSHMDVDVGNTTVVCHNSSDL
RQNGYANTTEKRMRVRRANNLRITAIPETASQDTERVKLEVTGLGGLSNGKQSKFEWECK
EDCKGKCNDKTTDKTHLIEKDCLPNPFEFFEYTFSVKKWSDNGKWVDLISTSRCITVTPT
KFANFRIGCQDNCNIVDVKKDVKFKLDCNSSCPKVIWHIEDPKPSTGALQNCYNNAGKKP
LTERKDLDGQKEYKVSKNYLKEASDRFQNLHVIVYDKETFEYARYTIQIPGVTTPAPADT
TLPVTAAPAITLSPPSCSIFPPNGTVLDSFNITCTTPTSCTNGCKYCFKSDQGKHLRCSS
VNKVILIFLPVGEISSNYMLSVEVTVTELNTKTRGSTTITTEVRPAKSGTPVQELQSAVA
DTVANLGQQGMLSGETLGQMFKSVSDILNKGSSDEKNNRMKLREQMLMNITEALENSSSS
TPQKVQLTARAVAGLTKRGDELSLDAQLEASFLVANLSSSLLSMNASEHGGEEEMVQAAT
PIVEAASNILDVSSNREVSDLLLKGMDNVQSALLNWKKVDEAPVIVNSSQITVFVNRVST
ETIQMQSISNPISSSASFSFPPLGADILSPYEPVDVRMLSLKKNPFSWSEENNITGTVGS
VSLTRGDGSVIPIENLSEEIEIFLPRPEGGQANSTILYLGNYSTLMVDVPSPDVTLVLKI
KPSKDITFQLFLGYKEYPNDKQYIAKTQMPHQSNTSEEKYTWVLGPNDLTGKVGVHYLVV
RPIVEAGVKSVNATVTVTSIAAQCKYWNETLSTWSEDGCRVGPLTTLLATQCLCTHLTFF
GNSFFVMPNLVDVSRTAELFGTFAQNPVVVCFIGSIFVAYVLVVIWARRKDIQDTAKVKV
TLLEDNDPLAEYRYMLNISTGHRRGASTSSQVTVTLLGMEGESEPHHLTDPDKPVFERGA
VDTFLLTTPFSLGELQSIRLWHDNSGGHPAWYINKVMVQDVETGQKWHFLCNSWLAIDMS
ECTLDKVFPVATEMDLKKFSNMFFMRTAKDFRDGHIWFSVISRPPTSTFTCVQRVSCCFS
LLLCTMLTSIMFWGIPTDPSEQTMDLGHIEFTWQQLMIGVQSSIIMFPINLLIVSIFRNT
RPRETKPGKHKAEVSKQGKTGRVTHSQPSSPQRDRELTPDTVIKDIKKIAQSLFKAMKSP
IPRLELEMKPGPQTDINTLLSLVEDIIRQQNRAGGEFYTDASKKEGSLILSLGVTNLQES
SLCGSPEKTGDGRQKRSTNSQYLYRQLRHVEKELSLLGPSRFPNPDNYCRAVQQVQGIKG
LIESSSLGGDELDQSPGQAESSDGDRGSKKCCQDGLPWWFVFIGWILVVATSGVSGYFTM
MYGLTYGKDRSISWLISMVVSFFQSLLIIQPLKVLGLAAFFALVLKKVDQDEYGDPKIEG
ALRNPDDPDVVWAVRRDSTCSFYQPPPPTDIERMRNNMIKEQKVFALIKEILTYMGFMWM
LLLVAYGQRDPNAYFLIQHIRQSFSQGISDSMSHGNVFTWANTSLLSNLFGEYPGFITDG
NSKLVGNARLRQVRVQKNSCRIACSMRQAVPDCHAPYSWEVEDMGSYGPGWNRSASENTS
KTLRSPWQYQTQARLRAQPIWGSVVLYRGGGFVVDLGPDSQNASSTLQYLFDNTWLDLFT
RAVFVEFTVYNANVNLFCIVTLMLETTAVGAFQFRSELQSVRLYQSTGGLHIFVMASEVI
YFLFIFYYMYVQGKLMKQQKWAYFKTKWNLLELAIILLSWSALSVFIKRSLLGNRDMEYY
HNHKDQFASFHETATADAVLGYLIAFLVLLATVKLWHLMRFNPKLHRITATLQRAWTDIS
GFLVVITIMFLAYSIVSNLMYGWKLYSYRTLLDSALTMVSLQLGIFNYDEVLDYNPVLGA
FLIGSCIIFMTFVVLNLFISVILVAFTQEQMHHKPSEEEEIVDLMLMKLCSLFGIKYKKE
DKEESNSPKVNANNASVTKKEPSTISS
NT seq
6564 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggagctcagggtttcagtgggaggcaacaagcaactgtagccaggagctgcac
ttcatctgccaatttgtccagaaaaacatcatccttcagaaggccatcggggagtttggc
atcattaagtgctatagcttgaaccaatcaacagatggtgcaaactgcaaggccctgtac
ggaagtccccttcaaatccaggtagaagtagaaactggtacaaatgtgacctacaaaatc
cacagtggtgagatgttggtggccaattcatcagcagtcagaggaatcgtcccccacaac
atcacagtgggaccagaggtggagcaacagctgggctctggctgccaccagctgaccctg
catgcctctaacggggtctcggtcttgggcgtgtccactgagttgcaggtgtgtctgctg
gagcctgtggagggcctgctgggatccgtgatggctgagggggggtgtccagactcagac
ctctatgttagtgtctccctggaccggggagccccagtgcagcttctcttccaggtgtct
ggagccaacagcagcatctctgagaccagagacatgcaaaacaacagcatgcaggtttac
aatatctcaaccactatccaaggatttttgcaagtgaaagtcagggcctggaatgtcttc
tcacacatggatgtggatgtggggaacacaacagttgtttgtcacaacagttcagacctc
aggcagaatggctatgcaaacacaacagaaaaacgtatgagagttcgccgagctaataac
ttgagaattactgccattccagaaactgccagtcaagacactgaacgcgtcaaacttgag
gtaactggcttaggaggactatctaatggaaagcagagcaaatttgaatgggaatgcaaa
gaagactgtaaagggaaatgcaatgataaaacaacagacaagactcatttgattgaaaaa
gactgtcttccaaacccatttgagttttttgaatacactttttctgtgaagaaatggagt
gacaatgggaaatgggttgacttgatttcaacatccagatgcatcacggttactccaaca
aaattcgccaactttagaattggttgccaggataattgtaatatagtggatgtaaaaaaa
gacgtcaaattcaaattggactgtaactccagttgcccaaaggtgatttggcatattgag
gacccaaaaccttcaacaggtgccctgcaaaactgttacaacaacgcagggaaaaagcca
cttacagaaagaaaagatctagatggtcagaaagagtacaaagtgagcaaaaactacctg
aaagaagcttcagataggtttcagaatctccatgtgatagtttatgataaggaaaccttt
gaatatgccaggtacaccattcagataccaggtgttacgactcctgcacctgctgatact
acgctacctgtaaccgctgctccagctatcaccttaagtcccccttcatgtagtattttc
cctccaaatggcaccgttctggattctttcaatatcacctgtacaacacctacatcttgc
acaaacggctgcaaatattgttttaaatctgaccaaggtaaacatctgcgctgcagttct
gtaaataaagtaatcttaatcttcctacctgttggggagataagcagcaactacatgctg
tcggtagaggtgactgttacagaattgaacacaaagacacgtggaagtaccacaatcacc
actgaggtgcggccagccaagtccggtactccagtgcaggagctccaatctgcagtggcg
gacacagtggctaatctagggcagcaggggatgctctctggagagacccttggacagatg
ttcaagtctgtgtcggacatactgaataaaggctccagtgatgaaaagaataacaggatg
aagctgcgagaacagatgctgatgaatataactgaagcactggagaacagctccagcagc
actcctcagaaagtgcagctgacggccagagctgtggcaggactcaccaagaggggtgat
gagcttagtctcgatgctcagcttgaagctagcttcctggtggcaaacctcagctcttcc
ctcctctccatgaacgccagtgagcatggtggagaagaggagatggtgcaggcagctaca
ccaattgtagaggcagccagcaatatcctggatgtttcctcaaacagagaagtctctgat
ttacttctcaagggcatggacaatgtgcagagtgcactgttgaattggaagaaggttgat
gaagctcctgtgattgtcaacagctctcagatcactgtgtttgtgaacagagtgtcaaca
gaaactattcagatgcagtctataagcaacccaataagctcctctgcaagcttttccttc
cctcccctgggtgctgatatcctttctccatatgaaccagtggatgtgcgaatgctgagt
ttgaagaagaacccattttcatggagcgaggagaacaacattaccggcactgtggggtct
gtctccctgaccagaggagatggttctgtcatccccatagagaacctatctgaggagatt
gagatcttcttgccaagacctgaaggagggcaagcaaacagcacaatactgtacttggga
aactatagcacattgatggtcgacgtcccttcacctgatgtaacactggtgctgaagata
aagccatcgaaggacataacctttcaactgttcctggggtataaagagtacccaaatgat
aaacaatacatagccaagactcagatgcctcaccagagcaacacgtcagaggagaaatac
acctgggtcctgggtcccaatgatttgacaggaaaagttggggtgcattaccttgtggtg
aggcccattgtggaagcaggggttaaatccgtcaatgccactgtgactgtcacctccatt
gctgctcagtgcaaatattggaatgaaaccttatccacctggagtgaagatggctgcagg
gttggtcctttaaccacgctattggccacccagtgcttatgtacgcacttgaccttcttc
gggaactctttcttcgtcatgcccaacctcgtagacgtgtcacgtacggctgagctcttt
ggcaccttcgcacaaaatcctgtggtggtgtgctttattggttccatctttgttgcttac
gtattggtggtcatatgggcacgcaggaaggacatccaggacacagccaaggtgaaggtg
acattgttggaagataatgaccccttggctgaataccgttacatgctgaatatcagcact
gggcatcggcgtggtgcttccacctcctctcaggttactgtgactctgctgggcatggag
ggagagagtgagccacaccacctcactgaccctgacaagcctgtgtttgagaggggtgca
gtggatacatttctgttgaccacgcccttctctctgggggagctgcagagcatcaggctg
tggcacgacaactccggggggcacccagcctggtacataaacaaagttatggtgcaagat
gtagagacaggacagaagtggcacttcctgtgtaactcatggctggccatagatatgagt
gagtgcactctggataaagttttccctgtagccacggagatggatttgaagaaattcagt
aatatgttcttcatgaggacggcaaaagatttccgtgatggccacatctggttttctgtg
atcagccggcctccaacgagcaccttcacatgtgtccagcgtgtctcctgctgtttctct
ctgctgctctgcaccatgctgaccagtatcatgttctggggcatccctaccgacccctct
gagcagaccatggacctgggtcatattgagttcacctggcagcagctgatgattggagtt
cagagttcaatcataatgtttccaattaatctcctcattgtgagtatcttcagaaacacc
cgccctcgagagacgaagcctggaaagcacaaggcagaggtgtccaagcaggggaagact
ggcagagtgactcactcacagccctcctccccacagagggacagagaactcacaccagac
acagtcatcaaggacataaagaagattgctcagtcactcttcaaggctatgaagagcccc
attccacgcctggagttagagatgaagcctggaccacagactgatatcaacactctgctc
tctctggtggaggacatcatccggcagcagaaccgagccggtggagagttctacactgat
gcctccaagaaagagggatcgctcattctctcactaggggtaaccaatctacaagagagc
agcctgtgtgggagccctgagaagactggggatgggagacagaaaaggagcaccaacagc
cagtatctgtacaggcagctacgccatgtagagaaggagctgagcctactgggaccttct
cgcttccccaacccagacaactactgccgggcagtgcagcaggtccagggcataaaggga
ctgatagagtcttccagcctgggaggggacgagctggatcaaagcccaggccaagctgag
agtagtgatggcgacaggggcagtaaaaagtgctgtcaagacgggcttccctggtggttt
gtgtttatcggctggatactggtggtagccaccagcggagtatcaggatacttcaccatg
atgtatgggttgacctatgggaaggaccgctctataagctggctcatctccatggtcgtt
tctttctttcagagcctcctaatcattcagccgctgaaagtgctaggtttagcagccttc
tttgctctcgttctgaagaaagttgatcaggacgaatatggggatccaaaaattgagggg
gcactcagaaacccagatgaccctgatgtagtctgggctgtcaggagggatagcacatgc
agcttctaccagcccccgccacccacagacatcgagaggatgaggaacaacatgatcaag
gagcagaaggttttcgccctcatcaaagagattctcacctacatggggttcatgtggatg
ttgctcctggtggcgtacggtcagcgggaccctaacgcttacttcctgattcagcacatt
cggcagagcttcagccaagggatctcagacagcatgagccacggaaatgtgttcacctgg
gcaaatacctctctcctcagcaacctcttcggagagtacccaggttttatcacagatggg
aactccaaactggttggtaatgcccgtcttcgccaggtgagagtgcagaagaactcctgc
cgcatcgcctgctccatgcgccaggctgtacctgactgccatgctccatactcatgggag
gtggaggacatgggctcctatgggccaggctggaaccgctctgcaagtgaaaacacctca
aagaccctccgcagcccctggcagtaccaaacccaggcccgactcagagcccaaccaatc
tggggcagtgtggttctctacaggggaggggggtttgtggtggacctgggccctgactca
cagaacgctagcagtacccttcagtatctgtttgacaacacctggcttgatttgttcacc
cgagcagtctttgtagagttcacagtgtacaatgccaatgtcaacctcttctgcattgtc
acactcatgctggagaccacagctgtaggagcgttccagtttcgcagtgagctgcagagt
gtccgactataccagtccaccggtggactccacatctttgttatggcctctgaggtcatc
tatttcctctttatcttctactacatgtatgttcagggaaagctgatgaagcagcagaag
tgggcttacttcaaaacaaagtggaacctgctggagctcgccatcatcctcctgagctgg
agcgcactgtctgtcttcattaagaggagcctgttagggaaccgggacatggagtactac
cacaaccataaagaccagtttgccagtttccatgagacagccacagcagatgcagtgctg
gggtatctgatcgcattcctggtgctactggctacagtcaaactgtggcacctgatgagg
ttcaaccccaagctacacaggatcacagccacactgcaacgtgcctggactgacatatca
ggcttccttgtggtcatcaccattatgttcctggcctattctattgtttctaatctgatg
tatggctggaagctgtactcatataggactctcctggattctgctctgaccatggtcagc
ttgcaactgggcatcttcaactatgacgaggttcttgattacaacccggtgcttggtgcg
ttcctcatcggctcctgcattatattcatgacctttgtggttctgaacctgttcatctca
gtcatcctggtggcgttcactcaagagcaaatgcatcacaagccctcagaggaggaggag
atagtggatctgatgctgatgaagctctgcagcttgtttgggatcaaatataagaaagaa
gataaagaagaaagtaacagtcccaaggtgaatgccaacaatgcctctgttactaagaaa
gaaccctccactatatcctcatag
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