Salvelinus fontinalis (brook trout): 129834532
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Entry
129834532 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
sfon04144
Endocytosis
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129834532
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129834532
09144 Cellular community - eukaryotes
04530 Tight junction
129834532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129834532
04121 Ubiquitin system [BR:
sfon04121
]
129834532
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129834532
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129834532
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129834532
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
HECT type E3
129834532
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
129834532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
129834532
NCBI-ProteinID:
XP_055755584
LinkDB
All DBs
Position
35:complement(21096320..21140786)
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AA seq
1198 aa
AA seq
DB search
MARRLRLHFASRRSNTDPLSESLSSHGEESGLCVSTRSPTESLAHSSVQMKVIPGQLALA
LPPLSPEYGNLQRYSSVFIPKVNTGSVSKKSTLQISLQPRGKLNGELENSTEGGEPGVGE
VGAGSGSDGLSCSSSTASDAGYCSSSSIFEPELPDQRRASHERSLPRRKARVPLRRCSSL
VIFPRSPCNTPPASPVSPVALPALPPTRGSYQTSHQLQLSPSEPPQEDETGTLKASIATA
MNGLRLSKSSFPSAEFRDARPMVHFNIPLPDKPKGKMEECEKTDHSATLDRPCRDKADHS
ANLDQHSSVLLHFAQQRPMSGKASINRTTVNVECPESPTQAPQSEGECGPRHIKLFRSTS
ACFLPSTKLSERSHSAGLADNGNGQENHCHHALQRSFSLEVPYHNTGISCQVSNQKLSNS
PHVHIHVSHGYGARVSSPVIDVNTNHKGDHIQKSPARKTMTRDDFLGQVDVPLHQIPTEN
PNIERPYTFKDFLLHPRSHKSRVKGHLRLKMTYLPKNNSEDAAEQTEDMDPSWEFLEGQD
MSGPRHNHLLPAMPPGWEERQDNLGRTYYVNHETRTTQWHRPIVQDSQVEAEQRQNIHME
AQHAFTARRQISDQEDSNDRQESPESWEIMTEDESTLYNSQRSPPPPHSPLEFHSFCDEL
SRLQASGATSGNRRTSLQLQGPSSHSSHSSRRGSAQTLTVEEHPVHPVLLATSAGLPPGW
EEKQDSKSRPYYVNHNSRITTWTRPLIQEDPRLKIPVHMRRRPSLDPTDLGPMPPGWEER
VHSDGRIFYIDHNTKNTQWDDPRLQNSAVTGPAVPYSRDYKQKYEYFRKKLKKPADIPNR
FEMKLRRNAVLEDSYRRILSIKRADFLKARLWVEFEGEKGLDYGGVAREWFFLISKEMFN
PYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYK
MMLQKPITLQDMESVDSEYFNSLKWILENDPIDLDLRFTIDEELFGQTHQHELKPGGSEI
VVTDDNKKEYIHLVMQWRFVNRILKQMTAFKEGFYELIPQDLIKIFDENELELLMCGLGD
VDVNDWRENTKYKNSYCPNQPVILWFWKTVLLMDAEKRIRLLQFVTGTSRVPMNGFAELY
GSNGPQLFTIEQWGTRDKLPRAHTCFNRLDLPPYESFEELREKLHIAIENAQGFDGVD
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcggctccgcttgcactttgcgtctaggagaagcaacacagatcctctgtca
gagagcctgagcagccatggtgaggagagcggtctctgtgtgtcaacccgcagccccaca
gagagcctagcgcacagctctgtccaaatgaaggtgattccagggcagttagcattggct
ttgcctcccctgtccccggagtacggtaatttacagcgctactcatccgtatttataccc
aaggtgaacaccggcagcgtcagcaagaagagtactctgcagatctccctgcagcctcgt
ggcaagctgaatggagagctggagaacagcactgagggcggggagccaggggtcggcgag
gtgggagcaggcagtggctcagacgggttatcctgtagcagcagcacggccagcgacgca
ggctactgcagcagcagcagcatctttgagccagagctcccagatcagcgtagggcatcc
catgagaggagtctgccccgtaggaaagccagggtccccctgagacgctgctcctccctg
gtcatatttccaaggagcccctgtaatacaccaccagcctccccggtcagccctgtggct
ctacccgccctgcctccaaccaggggctcctaccagacttctcaccagctccagttgtcc
cccagtgagcccccgcaggaggacgagacgggcaccttgaaagcgtccatcgccacggcg
atgaacggcctgcgactctctaagagcagctttccgtcagcggagttcagagacgccagg
cccatggtgcattttaacattccgcttccggataaacctaaaggcaaaatggaggagtgt
gagaagactgaccactcggctaccttagaccgaccatgtcgcgacaaggccgaccactct
gcaaatttagaccaacactccagtgtgctactgcactttgcccaacagcgaccaatgtct
gggaaggcatctataaacagaacaacagtcaatgttgaatgtcctgaatctccaacccag
gcccctcagtcggagggtgaatgtggccctcgccacattaagctgtttcgcagcacctcg
gcttgctttctcccctcaactaaactttcagagaggagccacagtgccggtctcgcagac
aatggaaatggacaagaaaaccattgtcatcacgccttacaaaggagcttttctctggaa
gtcccctaccataatactggtatttcatgtcaggtttccaaccaaaaactatctaactct
ccacatgtgcacatccatgtgtcccacggctatggggcaagggtctctagccctgtcatt
gatgttaacactaaccacaaaggggatcacatacaaaagagccctgcaagaaagaccatg
acacgtgatgactttctggggcaggtggatgtaccattacaccagataccgacagaaaat
cctaacattgaaaggccatacacattcaaggattttctacttcacccgagaagtcacaaa
tccagggtcaagggtcatctccgtctgaagatgacctacctacccaaaaacaactcagag
gatgctgcagaacagactgaagacatggatcctagctgggagtttctggagggccaggac
atgtccggtcccaggcacaaccacctgctgcctgcaatgccccctggctgggaggagagg
caggacaacctgggcaggacctactatgtcaaccacgaaaccaggacgacacagtggcac
aggcccatagtacaagacagccaggtggaggcagagcaaaggcagaacatccacatggag
gcccagcacgccttcaccgcccgcaggcagatctctgaccaagaggactccaacgacaga
caagagtctcctgagagctgggaaatcatgacagaggatgagtccaccttgtacaacagc
cagcgctccccccctccaccccattcccccctggagtttcactccttctgtgatgagctc
agtcgcctccaggcctcgggtgccacatccggcaaccgacgtacctccctccagctgcag
ggcccttccagtcattcaagtcactccagtcgcagaggcagtgcccagactctgaccgta
gaggagcaccctgttcatcctgtgttgttagcaacctcagcggggctgcctccaggctgg
gaggagaagcaggatagtaagagcagaccctactacgttaatcacaacagcaggataacc
acttggacacggccactcatccaggaagaccccaggttgaagattcctgtgcacatgagg
aggagaccttcgctagacccaactgacctcgggccaatgccgcctggctgggaggagagg
gtccacagtgatgggaggatattctacatagatcacaacacgaagaacacacaatgggat
gaccccagattgcagaattcagccgtaactggaccagctgtgccttactccagagactat
aaacagaagtatgaatacttccggaagaagctgaagaaaccggctgacatccccaaccgc
tttgagatgaagctcaggcggaacgccgtgctagaggactcctacagacgaatcctgtca
atcaagagggccgacttcctgaaggcgcggctgtgggtggagtttgagggagagaagggc
ttggattacgggggcgtggccagggagtggttcttcctcatctccaaggagatgttcaac
ccctattatgggctgtttgagtattctgccacggacaactacactctgcagatcaacccc
aactcgggcctctgcaatgaggaccacctgtcctacttcaagttcattggccgtgtggca
ggcatggctgtctaccatggcaagctgctggacgccttcttcatcaggcctttctacaag
atgatgttgcagaagcccattactctacaggacatggagtctgtggacagtgagtacttc
aactccctgaagtggatattggagaatgacccgatagacctggatctgaggttcaccata
gacgaagagctctttggacagacacatcagcatgagctgaagccaggaggatctgaaata
gtagtcaccgatgacaacaagaaggaatacatccatcttgtcatgcagtggaggttcgtg
aacaggatattgaagcagatgaccgcattcaaggagggattctatgagttgataccccag
gatctcatcaagatctttgacgagaatgagctggagcttctgatgtgtggcctgggagac
gtggatgtgaacgactggagggagaacacaaagtacaagaatagctactgtcccaaccag
cctgtcatcctgtggttctggaagactgttctgctgatggatgcagagaagcgtatccgc
ctgttgcagtttgtgactggcacctcccgggtcccaatgaatggctttgcagagctctac
gggtctaacggaccacagctgtttaccattgagcagtggggaacacgagacaaactacct
agagcccacacgtgcttcaaccggctggacctgcctccctatgagtcgtttgaggagctg
agggagaagctacacatcgccatagagaatgcacaaggctttgatggagtggattag
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