Salvelinus fontinalis (brook trout): 129834554
Help
Entry
129834554 CDS
T11136
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin-1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129834554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AXH
ATXN-1_C
RecD_N
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
129834554
NCBI-ProteinID:
XP_055755630
LinkDB
All DBs
Position
35:21856280..21870477
Genome browser
AA seq
816 aa
AA seq
DB search
MKPGHERNQECLPPKKRDLNNSTSSSSAGGGAGSGVGGGGGGGGGEEVSSTQSSGVGSDT
QGGGTAEEWLRAQHGLHYGVESAEGLQGLPVDQYSMLYRVALPSVSYSQTSLHPVLSHIS
PAYTVPSSLLQHHPGISYPPLGYAQIPHSSFQFVSPYGAVPYAVPPGFVPSSLISPSGTL
SQPHLVPYQSVIQEGVVSPPTQAHVSAHAFAKMGSSGGVPLMLTSEQAAQHQQHLGALPA
AELSPRGVPVFYHSQGTRAAPAPWDPYSGEQETDRDRELNGGEREQAAREMLQDSVYIAR
NARLLQAASASVALEHAQDRSLKSRRLDERASPGQRSTPDTDLEVQQVVGRLASPVQGVS
GGRKEVSFGPLNLSQGSQRGREAHGEAGESAGRTAYAIHPAVYGDPRMTAHQQQAGQPGH
AVILANGQTVLVPLDYPHLPHQHQQPPQHYPSQTNDDTSAVTMASPTPYSKASESPARVG
LPDRAVVDLAAVEQHPQQPFSVPVTAALTQALVPTPAASNPSHFMKGAIIQLATGELKRV
EDLQTQDFVRSAEVSGGLKIDSSMVVDIRTSQQRPGLVALHFTVGEQQSKVTIDVPPEHP
FFVFGQGWSSCSPERTAQLYGLACHHLQVGDVCVSITLQQPPQQQKQPLQQQQQQQQQQQ
QQQQQTQARTSTKANSTSGAIGQPMGPPAPQQPRPQPHFRMERIHRERERGDKEEPMQLG
GVGQSEMPTRPNRTSAEHTRSQSSYYLHTEGSARPGAGVGVVSTVSSASQRRWSSPGLQR
YMKVEEGAHPQLGSSRPSFIPQEVKLSIEGRSNAGK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaggtcacgagcgcaatcaggagtgcctgcctcccaagaagagggatctcaat
aacagcaccagtagtagtagtgcgggaggaggggcaggcagtggggtggggggaggaggt
ggtgggggagggggggaggaagtgtcctccactcagagctcaggggtcggtagtgacact
cagggaggaggcacagcagaagagtggctgcgtgcacagcatggtctacactatggagta
gagagtgctgagggcctccaagggctgcccgttgaccagtacagcatgctctatagggtg
gctctcccctctgtctcctactcccagaccagtctacacccagtgttaagccatatctct
ccagcttacactgtcccctcatctctcctacagcatcatccagggatctcctatccccct
ctaggctatgcccagatcccccactcctctttccagtttgtctccccatacggtgcagtc
ccttatgcagttccccctggctttgtccccagctccctgatctctccctcgggcaccctc
tcccagccccacctggtcccctaccagtcagtcatccaggagggggtggtctcccctcct
acccaggcccatgtatctgcccatgcctttgcaaaaatggggtcgtctggaggtgtcccg
ctgatgctgacctcggagcaggctgcccagcaccagcagcacctgggcgcgctgcccgcc
gcagagctcagtcctcggggagtgccagtcttttaccactctcagggcaccagggctgcg
cctgccccctgggacccctacagcggggagcaggagacagacagggatagagagttgaat
ggaggggagagggagcaggcagccagggagatgctccaggactcagtctacattgccaga
aatgcacggctgctgcaggcagcatccgcctctgtagcactggagcacgcacaggacaga
agcctgaagagccgcaggctggacgagagggcttcgcctgggcagcgcagcaccccagac
actgacctggaggttcagcaggtcgttggtcgcctagcctctcctgtccaaggtgtgagt
ggagggcgcaaagaggtgtcctttggtcccctgaacctatcccagggctctcagagaggc
agagaggctcatggggaggcaggtgagagtgctggccggacagcgtacgcgatccaccct
gcggtgtatggagacccccgaatgacggcccatcaacagcaggcagggcagccaggccac
gcggtcatcttggccaatggacagacagtcctggtccccttagactatccccacctcccc
caccaacatcaacagccaccccagcactaccccagccagaccaatgatgacacctctgct
gtcaccatggcctcccccaccccctactctaaagcctctgagtctccagccagagtgggc
ctcccagacagggctgtggtggatctggccgccgtggagcagcacccccagcagcctttt
tctgtcccagtcacggcagccctcacgcaggccctggtgcccacccctgccgcctccaat
ccctcccatttcatgaagggggccatcatccagctagccacgggggagctgaagcgcgtg
gaggacctgcagactcaggattttgtgcggagtgctgaggtgagtggggggctgaagatc
gactccagcatggtggtggacatcaggaccagccagcagagacccggcctggtggcgctg
cacttcacagttggcgagcagcagagcaaggtgaccatcgacgtgcccccggagcacccc
ttctttgtgtttggccagggctggtcctcctgcagcccagagcgcacggcccagctctat
ggcctggcatgccaccacctgcaggtaggagacgtgtgtgtgtccatcactctgcagcag
ccgccccagcaacagaaacagcccctgcagcagcaacaacagcagcaacaacagcagcag
cagcagcagcagcagacccaagccaggacttccaccaaagccaactccacatcaggggcc
atcggccagcccatggggccccctgccccccagcagcccaggccacagcctcacttcagg
atggaacgcatccacagagagagggagaggggggataaagaggagcccatgcaactaggg
ggtgttgggcagagtgagatgcccaccagaccaaataggacttcagcagagcacactagg
agccagagcagttactatttgcacacggagggttctgctcgtccaggggcgggggtggga
gtggtgtcgacagtgtcgagcgcgtctcagaggcgctggtcctcccccggccttcagaga
tacatgaaggtagaggaaggggcgcaccctcagctgggctcctctcgaccctccttcatc
ccacaggaggtcaaactgtccattgaggggcgctctaacgctgggaagtag
DBGET
integrated database retrieval system