Salvelinus fontinalis (brook trout): 129834655
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Entry
129834655 CDS
T11136
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04217
Necroptosis
sfon04622
RIG-I-like receptor signaling pathway
sfon04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
129834655
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129834655
04625 C-type lectin receptor signaling pathway
129834655
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfon01002
]
129834655
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129834655
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129834655
Peptidases and inhibitors [BR:
sfon01002
]
Cysteine peptidases
Family C67
129834655
Ubiquitin system [BR:
sfon04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129834655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
129834655
NCBI-ProteinID:
XP_055755822
LinkDB
All DBs
Position
35:complement(27908512..27968156)
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AA seq
962 aa
AA seq
DB search
MSSALWSQEKSSGGFREDWRFYMVVKECTVEKPPQKTQRIPRGSLGQACQERNSLGRTLP
PSKGKRSLRVLDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKPRLERARD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGVWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWDDEEEELGELEVDHVTLVEEEMDFHQLEINSRVLVQTRE
GPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDV
MPEYSMQDQRLQKHSFTPRGSSSDKSSSGQSKPKSKGLGLQCGSRSKSEFYYTLNGSSVD
HPVQAKSKSTWYIDEVGEDPAKSLTDTPPDFNEATPPTRAPPSASLSNDNKFHSLPFSLS
RKTGPNGSMSHGPLSLSVQSVMGEQMQMPEPPSPTPPSPRPPSPPSSRGGGGVPGLEVGS
LVEVKENPPLCGVIRWVGLPPGLPEPLAGLELEEECVGCTDGTFQGTRYFSCAPKKALFV
KLKCCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDIMVGKKKGI
QGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYV
CATKVMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYF
YQIFMDKKDKVGVPTSQQLIEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLE
LDITDLLEDTPRECRICGGLALYECRECYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHR
HGKLSVPKELQEGVWRQGSYPRQRMELFAVLCIETSHYVAFVKYGHQDSAWLFFDSMADR
DGGQNGFNIPQVSPCPEVGAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSL
YK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagtccagtggaggattcagggaggactggcgc
ttctacatggtggtcaaggagtgtacagtggagaagcctccccagaagacccagaggata
ccccggggcagcctgggacaggcctgccaggagaggaacagcctggggcgcacgctaccc
cccagcaagggcaagaggagcctacgcgtcctggaccagaccaacgtggtgctgagcctg
gatgagcgagacgtcctggagctggatgagaagttagctgagctgctgttccccatcacc
aactgtgaggagcgctatgccctgctgtgcaacaagccccggctagagcgggccagagac
atcgattgtggctccaaggtgcgcgtgcagctgcgttcgggggatgaacctttgcctggg
gtagtccgatttaaaggatctcttctcccagacagggctctctccggggtctggtttgga
gtggagctgctggaggagggcagaggccagggcttcacagagggctcctaccagggccga
cagctgttccgctgtgaggatgagtgcggggtgtttgttgccctggacaagctggagctg
tgggatgacgaggaagaggagctgggagagctagaggtggatcacgtcaccctggtggag
gaggagatggatttccatcagctggagatcaactccagggtcctggtccagaccagagag
ggaccggagagaggaaccatcatcttctgtgacctgctgcctgggaatgagagcctgggg
tactatgtgggagtagacatggacaatcctattggggactgggatggtgttatcgacggg
aagctgctatgtaattttgccagtctggaacacacccgtctagtgcccatctgtgacgta
atgccagagtactccatgcaggaccagaggctgcagaagcacagttttacccccagaggc
agcagcagtgacaagtcctcctctggccaaagcaaaccaaagagcaaaggcttaggtctt
cagtgtgggagtagaagcaagtcagagttttattatactttaaatggcagctctgttgac
cacccagtccaggccaaatccaaaagcacatggtacattgatgaagtcggagaggaccct
gccaagtccctcacagacacgccccctgacttcaatgaagccacacctcctaccagggcc
ccgccctctgcttccttgtccaatgacaacaagttccactccctgcccttcagcctgagt
cgtaagacggggcccaatggcagcatgagccatggacccctctccctctccgtgcagtca
gtgatgggagagcagatgcagatgccagagcccccgtcccctacccctccctctccgcgg
cccccctcaccccccagctctcgcgggggtgggggtgtgcctggtctggaggtggggtcc
ctggtggaggtgaaagagaacccgcccctgtgtggggtcatccgctgggtggggctgccc
ccgggactaccagagccactggctggcctggagctggaggaagagtgtgttggctgtaca
gacggcacctttcaaggtacccgctacttcagctgcgcgcccaagaaggccctatttgtg
aagctgaaatgctgccggcctgactcccgttttccctccctacatcactcctccaacccc
atagagagatgcaactctattgctttcgggggttatctgagtgaggtggtgcatgagaac
actcctccacgcactgagaatgacggtctagacatcatggtgggcaagaagaaaggtatc
cagggacactacaactcctgctacctggactccacactcttctgcctgttttccttcagc
tcagtcctggacacagttctgctgaggccgaggtccaagactgacgtagagtattaccga
gagacacaggagctgctacgcacagagatagtcaaccccctgcgcatacatggctatgtg
tgtgccactaaagtgatgaagctcagaaggatactggagaaggtagaagctgcctcaggg
ttcacgtctgaagaaaaagatcctgaggagttcctcaatattttgttccatcacatattg
agggtggaccccttactcaagctgagatcggcaggtcagaaggttcaggactgttacttc
taccagatcttcatggataagaaggacaaagtgggcgtgccaaccagccagcagctcata
gagtggtccttcatcaacagtgacctcaaatttgctgaggctccttcctgccttatcatc
cagatgcctcgctttgggaaggacttcaagatgttcaacaagatcttcccctcactagag
ttagacatcacagacttacttgaagacactcccagggagtgtcgaatctgcgggggtctg
gctctgtatgaatgcagggagtgctacgaggacggtgacatcactgccgggaagataaaa
cagttctgtgaaaagtgcaatacacaggttcacctccacccgaggaggaaggcccatcgc
cacggcaagttgtccgtccccaaggaactgcaggagggtgtgtggcggcagggtagctac
cctcgccagcggatggagctgttcgccgtgctctgcatcgagaccagtcactacgtggcc
ttcgtcaagtacggccaccaagactctgcatggctcttcttcgacagtatggccgaccgc
gacggagggcagaatggcttcaacatcccccaggtgtctccatgtccggaggtgggggcc
tatctgaagatgacccctgaggagctgcacgccctggaccccaagagcatccagggccag
gcccgccgtctgctgtgtgacgcctacatgtgcatgtaccagagccccaccatgagcctg
tacaagtaa
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