Salvelinus fontinalis (brook trout): 129834832
Help
Entry
129834832 CDS
T11136
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129834832
Membrane trafficking [BR:
sfon04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
129834832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
129834832
NCBI-ProteinID:
XP_055756111
LinkDB
All DBs
Position
35:complement(38806311..38963381)
Genome browser
AA seq
2022 aa
AA seq
DB search
MEDKGPRVADYFVLAGLTDSSTPLEQEIHFHDVCHKTAKPKPPITDVAVVMRSLGEEVPP
GYTCVESTPSGLSADLNNGSLMAPQIFLCYRRGRDKPPLTDLGVLYEWKERLKQGCHVIQ
TTPSGRPANISSTSSQRIYVTYRRATESQTYAALAVTDICVIIPGKGETPPHTFCKVDKN
LNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATIE
AWPAQTKYSLPVFSTFVLTGSSGEKVYGAAIQFYEPYSQDCLTDQQRSQLGLPGLDHGPS
SPATSPSTPAPGPRALHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHTLPIEKHISH
FMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSILLQNLGPENAITLLVF
AVTEHKILVHSLRPAVLTSVTEALVAMIFPFHWPCPYIPLCPLALAGVLSAPCPFIVGVD
SRYFDLYDPPLDVSCVDLDTNTISHNEDKRALTWKILPKKACKNLMNVLNNLYQQLVDGQ
QRPDGLLELSMSDCTELACGKSLHSLEMEIQEAFLRFMAAILKGYRSYLRPITQAPSEKT
TDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKL
YSTDKGGKVDSDKPDETRLIEIDESQRSEHTVFITPPELPHLPDGEEHPLCYSYAGFPVL
SLDLFDPVDGLRPPASHLAVRQSCPTSPAPMFRRTKQEIKLSQKLARKYSSIPQMWSKCL
LCHCYGLWFICLPSYVKVCHSKVRALRTAYDVLRKMQDKKLQPPDEVCYRVLMQLCGQYG
QPVLAVRVLFEMKKAGVQPNAITYGYYNKAVLESTWPSSTRGGYFMWMKLRNVVMGVAQF
RQALRKQQPPPTQSPLSDGSDLDAVSHGSLDSSNTAEQGPYAPDSIKVDPTDDRRSTVSR
GDWGGVGSDTRSGHSHWGGSALHSPRHSGEQSDLGYNSLSKEEVRRGEPSPLDRDSTQDK
DNRKESDCSSLSETESAKGSGGCLPQQDFPEVNGPFKRHNSGIVRGNCTYDDAACEPKGS
TSTDYVAGLLLSSSLNEIGVVETNSLRRRHLSTLEEGGGSGSSGGGGGHDWQGVRGCRLS
EANRVGSGSSGTPVLGLGLHQGETDPARIAENLGADSKILQGTSFRQTNRPRSLVLGGSE
GVGAAGGRTRRCRRRDSPEDGEERDWSDEDKNNTDAIFDLEDLDLDGPTTESVAKTSQSR
KRTVERSASYSGVGVASASRGTVKRTGIETGFDPLSLLAAESKSQGDREDDLEVEMYGVT
TPTVRRQDHLAREIEMYMNHMGSPLNSRTPSMDLQDPSSPLFLHPPPPLITTPRRASLPH
TSPLRTGGLPRSRTHHFPSPSQPARQRLWSSPPCPRSTPSPQPSPYRERERDRDLGLLSP
SLSSSSFALDQLLTPTLDVFKSSVFSAGKGVAEKASRWYSRLATSYTVPTKEGNCDRLSV
SSLGMDPDCSSLLDVDEEGLGDPDGSIISPQRNGPGSRRSPRRSPSRRSSLRSRLDSPTY
KQTGFPPPDCSDLGSSRYTSNTSVFQNYAMELLISSCSRCKTCDGLVYDEEIMAGWTADD
SNLNTTCPFCGNPFLPFLNVEIRDLRGTGRFFLKSSPSADEAVSSSYSVSTGLDTGTSTL
STPCPTTVLSPLSPRITVEGCSGNNRLSSSRAQCIEIPTERRQGALSPGSAMVRSVSAFD
PMEEPTRLNHNVPTSGSLPSRLNEASDPLSVDMEWRLHHPEPVTVPYLSPLVLWKELESL
LENEGDPVITVSAVVDHHPIIYWNLVWSFRRLDLPSNLPGLILTSEHCNRGSTVPRHWMS
EDSKHVLVQILWDNLKLHRDLIQPFYILWNTQRLNCALLLDSVGYPLCRPVSEAERPFGE
ELLHSVVKSIQRNDVSRPMGQLLQLLGQSLGVKRQRSLYRDILFLCLVALGKDNIDIDAF
DREYKMAYDHLSPNLVKLTHNCDRPPSAGVMECRKTFGEPYL
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaggggcctcgtgtagcagactacttcgtgctggctggtctgacagactcc
tccacgccactggagcaggagatccacttccacgatgtctgccacaagacggccaaaccc
aagccgcccatcaccgacgtcgctgtggtgatgcgctcgctgggggaagaggtgcctcct
gggtacacgtgcgtggaatccacgccgtccggcctgtcagctgacctgaacaacggaagt
ctcatggcaccacagatcttcctgtgttacagacgaggacgagacaaaccaccactcact
gacctgggtgttctgtatgagtggaaggagcggttgaagcagggttgccacgtcatccag
accacgccctccggacgccctgccaacataagctccacctcctcccagaggatctacgtg
acgtatcgccgcgccacggagagccagacctacgccgccctggccgtcaccgacatctgt
gtcatcatccccggcaagggagagacaccaccacacaccttctgcaaggtggacaagaac
ctcaacagcagtatgtggggttcctcggtctatctgtgttacaagaagtctgtggccaaa
accaacaccatagcctacaaggcaggtttgtttagcaggtatcctgaggaggactatgag
tctttccccctgcctgagtccgtgcccctgttctgtctgcccatgggggccaccatcgag
gcctggccggcccagactaaatactccctgcctgtcttctccaccttcgtactgaccgga
tcctctggagagaaggtgtacggtgcagccatccagttctacgagccctactcccaggac
tgtctgaccgaccagcagcgctctcagctgggtctgccggggctggaccacgggccttct
tccccagccacctccccctccaccccagctccgggccccagggcgctacacaccaacaag
tgtatctgtttgctgtctcactggcccttctttgacgccttccgcaagttcctcaccttc
ctctatcgatactccatctctggacctcacaccttgcccatcgagaagcacatctcccac
ttcatgcacaaggtccccttcccctcctcccagaggcccaggatactggtgcagctctct
cctcacgacagcctgatgttgagccagcctgtgtcctcccctctaccactcagtggtggt
cggttgtccatactgctgcagaacctcggtccggagaatgctataacgctcctggtgttt
gctgtgacagaacataagatcctggtccactctctacggcccgctgttctgaccagtgtc
actgaggctctggtggctatgatcttcccattccactggccgtgtccgtacatccctctg
tgcccgctggccctggcaggagtcctctccgcaccctgccccttcatcgtgggtgtcgac
tcgcgctactttgacctttacgaccccccgctggacgtcagctgtgtcgacctcgacaca
aacaccatctcccacaacgaagataagagggccctgacctggaagatcctgccaaagaaa
gcctgtaaaaacctgatgaatgtgctgaacaatctctaccagcaactggtggacggtcag
cagcgtcctgatggcctattggagctgagtatgagtgactgtacggagctggcctgtggg
aagagcctccacagcctggagatggagatacaggaagccttcctcaggttcatggcggcc
atcttgaaaggctaccgctcatacctgagacccatcactcaggccccgtctgagaagact
actgacgcctcctctctctttgacctgcaagggttcctgaagagcagagaccggtcccac
cagaagttctactccctgatgaccaagactcagatgttcatcagattcatagaggagtgc
tccttcgtctcagacaaagacgccagcttggccttcttcgatgactgtgtggacaagctc
tacagcacagacaaaggaggcaaggtggacagcgataagccagatgagaccaggctgata
gagatcgacgaatcacagcgcagcgagcacacagtcttcatcacacccccagaactaccc
catctgcctgatggagaggagcacccactctgctacagctatgcaggtttcccggtgttg
agtcttgatctgtttgaccccgtggacggcctccgaccccctgcctctcacctggctgtc
cgacagagctgcccaaccagccctgcacccatgttcagacgcaccaaacaggagatcaag
ttgtctcagaagttagccaggaagtactcttccatccctcagatgtggtccaagtgtctg
ctgtgccactgctacggcctgtggttcatctgtctgccatcctacgtcaaggtgtgccac
tccaaggtgcgggcgctgcgcaccgcctacgatgtcctcaggaagatgcaggacaagaaa
ctacagcctcccgacgaggtgtgttacagggtcttgatgcagctgtgtggtcagtacggc
cagccagtcctggcggtcagagttctgtttgagatgaagaaggctggagtccaacccaac
gccatcacctacggttactacaacaaggcggtgttagagtctacctggccctccagtacc
agaggaggttacttcatgtggatgaagctgaggaacgtggttatgggtgtggctcagttc
agacaggcgctacgcaaacagcagcctccacccactcagagtcctctatcagatggcagc
gacctggacgctgtgagtcacggcagcctggatagctctaacacggccgagcagggcccc
tacgcccctgactccatcaaagtagaccccactgacgataggcgtagcacagtcagccgc
ggggactggggcggtgtggggtcggacacccggtcgggtcactcacactgggggggttct
gccctccactccccccgccactcaggggagcagtcagacctggggtataactccctctct
aaagaagaggtgcgtagaggagagcccagcccgctggacagggacagcacccaggacaag
gacaacaggaaggagagtgactgcagctccttgtcggagaccgagagtgctaagggcagt
ggaggctgtctcccccaacaggacttcccagaggtcaacggtccattcaagcggcataat
tccggcatcgtccgcggcaattgtacctatgacgatgcagcctgtgagcccaaggggtca
accagcacagactatgtagcaggtctcctgttgagctcctctctgaatgagataggtgtg
gttgagaccaacagtctgaggaggagacatctcagtacccttgaggagggaggtggcagt
gggagtagtggaggaggaggaggccatgactggcagggtgtgcgagggtgcagactgagt
gaagccaacagggttggcagtggtagcagtggtactccagtgttgggtctgggactgcac
cagggagagactgacccagccaggatagcagagaacctgggggcagacagcaagatcctc
caggggaccagcttccgccagacaaacaggccgcggtcgttagtcctgggagggtcagag
ggggttggagcagccgggggtagaaccaggcgctgcagacgtagagacagccctgaagac
ggagaggagagggactggagtgacgaggacaagaataacacagacgccatctttgatctg
gaggacctagatctggacggaccaaccacagagagcgttgctaaaaccagccaatcacgg
aagaggacggtggaacgcagcgccagctatagcggtgtgggtgtggcctcagcctcgcgg
ggcaccgttaaacgaacggggatcgagacaggcttcgacccgctgtcccttctggcggcc
gagtccaagtcccagggggacagagaggacgacctggaagtagagatgtatggggtcacg
acccctacggtgcggcgccaggaccacctggctagggagatagagatgtacatgaaccat
atgggttctcctctgaacagccggacccccagtatggacctccaggacccgtccagtccc
ctgttcctacaccctcctcccccactcatcaccacccctcgacgggccagtctcccccat
acctcccctctcaggacaggaggattacctcgctccaggacccaccacttcccctcgccc
tcccagcctgccagacagaggctctggtcctcacccccctgtccccgctccacgcccagc
ccgcagcccagcccctaccgggagagggagagagacagggacctgggtttgctgtcccct
tctctgtcctcctcctccttcgccctggaccagctcctcacccccaccctggatgtgttc
aagagcagcgtgttctcggcagggaaaggtgtggcagagaaggctagccggtggtactct
cgcctggccacctcctacaccgtgcctaccaaggagggtaactgtgaccgtctgagtgtg
tcctctctgggcatggaccctgactgctcctccctgttggatgtggatgaggagggactg
ggggacccagacggctccatcatctcccctcagagaaatggccccgggtcccgtaggagc
ccaaggagaagcccgtccagacgcagttccctgaggagcagactggacagtcccacatac
aaacagacaggctttcctcccccagactgctctgatctgggctcgtctcgctacaccagc
aataccagtgtcttccagaactacgccatggagctgttgatctccagctgttctcgctgt
aagacgtgcgacggtctggtgtacgacgaggagatcatggcaggatggactgctgacgac
tccaacctcaacaccacctgtcccttctgtgggaaccccttcctccctttccttaacgta
gagatcagagacctgagaggaactgggaggttcttcctgaagagcagtccgtcagcggac
gaggctgtgtcatcgtcctactctgtgtccaccggtctggacaccggaacgtccactctg
tccactccctgtcccactactgtcctgtctcctctctcacccaggatcactgtagagggt
tgctctggtaacaacaggctgtcgtcgtccagggcccagtgtatagagatccctacagag
cggcgccagggggccctgtccccggggtcagctatggtgcggagtgtcagtgcatttgac
cccatggaggaaccaactcgactcaaccacaatgtacccacttcaggcagcctgcccagc
cgactcaacgaagccagcgaccccctgagtgttgatatggagtggcgtctccaccaccca
gaaccagtcacagtaccctacctgagtcccctggtgctgtggaaggagctggagtccctg
ctggagaacgagggagaccctgttatcacagtgtcagccgtggtggaccaccatcctatc
atctactggaacctggtttggtccttcagacgtctggacctgcccagcaacctgcctgga
ctcatactgacctccgagcactgtaacaggggatctacggtccctcgccactggatgtca
gaggacagtaaacacgtgttggtccagattttatgggacaacctcaagctgcaccgggac
ctcatccagccgttctacatcctgtggaacacacagaggcttaactgtgctctgttgtta
gacagtgtgggctacccgttgtgtcgtcctgtgagcgaggcggagcgtccgtttggggag
gagctactccacagcgtggtcaagagcatccagaggaacgacgtctctcgaccaatggga
cagctcctacagctgctggggcagagcctgggggtcaagaggcaaaggagtctgtacaga
gacatcctcttcctgtgtctggtggctctgggaaaggacaacattgacatcgacgctttt
gaccgtgaatacaagatggcgtacgaccacctcagccccaacctggtgaagctgacgcac
aactgcgaccgtccgcccagcgctggggtcatggagtgtcgcaagaccttcggagagccc
tacctctga
DBGET
integrated database retrieval system
