Salvelinus fontinalis (brook trout): 129834863
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Entry
129834863 CDS
T11136
Name
(RefSeq) neogenin-like
KO
K06766
neogenin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04350
TGF-beta signaling pathway
sfon04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129834863
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129834863
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129834863
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
DCC/UNC5 family
129834863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
Ig_RIMBP2
fn3_SORL1
Tissue_fac
Sp38
EphA2_TM
Bile_Hydr_Trans
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
129834863
NCBI-ProteinID:
XP_055756172
LinkDB
All DBs
Position
35:complement(40315016..40526949)
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AA seq
1509 aa
AA seq
DB search
MAERGARLLLSLLCLTFLYPATTVSRHAEKGTAARPFSPFWFSVEPWDTLAVRGAPALLN
CSAHSGDPASEPTAPQARVDWKKDGTFLSLAPDDGRRRVLSDGSLLISSVVHSKHNKPDE
GTYQCVATIDSLGTIASRTARLTVAGMPRFSSQPAAASIRLGDSQVLACDVNPDLVPLAR
WEREREPLELSSRLVQLPNGALVVSNASEADAGLYRCMVENAGPAKTSEEAQLTILPETG
EERELEFLVEPLPVTKVVGASLLLPCVVTGYPAPYVRWMVGDKLVEESEGKLELVGGGSL
LIYNLTEEDAGVYSCMADITNNTIEAKAELTVQVPPEFLKRPANIYAHESMDIMFQCEVT
GSPAPTVKWVKNGDAVIPSDYFKIINEHNLQVLGLVKSDEGFYQCLAENDAGNMQSSAQL
IILEHDVALPTPPPPSLTPDTTDHVTPGSRGVANPTGPTPSAPRDVVASLVSTRFIKLTW
RPPAEPNGEDLTYSVYFNQEGTNRERILNTSRPGEMQVTIQNLMPDSKYKFRVLAHNKNG
LGESSAVLKVATQGEVQVPGPAPNLQAVSTTPTSVTLSWDTPLTGNGDVLTYKVYYMEKG
LDLEQDIDAGALSYTLMGLKKFTEYSIRVVAFNKHGPGVSTGDITVTTLSDVPSAPPQNL
TVEVHNSKSIMVRWQPPPPGAQNGEITGYKIRYRKGTRKSEAAETTGGTQLFQLIDGLER
GTEYTFRVSAITVNGSGPATEWSTAETFESDLDESRVPDIPSSLHVRPLVNSIVVSWTPP
ENQDMVVRGYTIGYGIGSPHAQTIKVDYKQRYYSIENLDPSSHYVITLKAFNNVGEGIPV
YESAITRPQSDPIDPDVDLYELFHAPYTPVPDPTPMLPPVGVQASVLSHDTIKVTWADNS
LPKNQKITDARYYTVRWKTNIPANTKLKTANTTNLSHMVTGLKPNTLYEFSVMVTKGRRT
STWSMTAQGTTFETIPSSSPKDVTVVSKELKPRTIIVNWQPPSEANGKITGYIIYYSTDV
NAEVHDWVIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTESSD
KMANDQASNLPVKPGSNQPPLDHGFGSPHGKPGITGSADNHILVIVVIISVGAFTIIVVV
VGAFLCTRRTTSHQKKKRAASKSSNSSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEP
NPVMTDTPIPRTSQDINPVDPSLDNSLLQRRNSYRGHESEDSISALAGRRGMRPKMMMPF
DTQPPQPVISAHPIHSLDNHHHHYHTGSLASPTRSYLHHHQGSAHLRPHACATPISYLDM
GSTESVRNTPSTEPLPPQAQPPCQAEHQHPDPEGSYQGSTATDDEPSASGSYCSAGQPLT
AHVRPTHPLKSFAVPANPAAIFESPALPSTPLLTQTGPQLHSVKTASIGTLGRVRPPMPV
TVPGAPDVPETSKMLEDVDSVLASLPSCSSLAPRSNPVPFPQSYEPDELTEEMAHLEDLM
KDLNAITTA
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcaaggttgctcctctctctcctctgtctcacctttctttacccg
gcgaccaccgtgtcaagacatgccgaaaaaggcacggcggcgcggcccttcagccccttc
tggttctcggtggagccgtgggacacactggccgtgagaggcgccccagcactgctcaac
tgctcagcgcacagcggggaccctgcctcggagcccactgccccccaggcccgtgtggac
tggaagaaggatggaaccttcctgagcctggcgccagacgacgggcggcggcgtgttctg
tctgacggctcgctgctcatatctagcgtggtgcactccaagcacaacaagcccgacgag
ggaacgtaccagtgtgtggccaccatcgacagcctgggaaccatcgccagccgcaccgcc
cgcctcaccgtggcaggtatgccccggttctccagccagccggcagcagccagcatacgc
ctgggagacagccaggttctggcgtgcgacgtcaacccagacctggtgcctttagcccgg
tgggagcgtgagcgtgagcccctggagctgagctctaggctggtgcagctacccaacgga
gccctggtggtgagcaacgcttcggaggccgacgctgggctctaccgctgcatggtggag
aacgctgggcccgccaagaccagtgaagaggcccagctcacaatactgccagaaaccgga
gaggagagagaactggagttcctggtagagccacttcctgtgaccaaagtggtgggggcc
agcttgctgctgccgtgtgtggtgacgggttacccagcgccctacgtccgatggatggtg
ggagacaagcttgtcgaggagagtgaggggaagttggagttggtgggaggaggcagtctg
ttgatctacaacctgactgaggaggatgcaggcgtctacagctgtatggcagacatcact
aacaacactatcgaggccaaggcagagctcactgtacaagttccaccggagttcctgaag
aggccggccaacatctacgcccacgagtccatggacatcatgtttcagtgtgaggtcaca
ggctccccggcccccaccgtcaaatgggtcaaaaacggagacgctgtcattcccagcgac
tacttcaaaatcattaatgaacacaacctgcaggtgctgggtctggtcaagtctgacgag
ggcttttaccagtgtctggcagagaacgatgcagggaacatgcagtccagcgctcagctc
atcatcctagagcacgatgtagccctccccacccctcctcccccctcactgactcctgac
actactgaccatgtaacgccaggctccagaggtgtggctaaccccactggccccaccccc
tccgccccccgtgacgttgtggcctcgctggtctccactcgcttcatcaagctcacctgg
cgccctccagctgagcccaatggagaagacctcacctactctgtctacttcaatcaggag
ggtaccaacagggagcgtatcctgaataccagtcggccaggtgagatgcaagtgaccatt
cagaacctgatgcccgactccaagtacaagttccgggtgttggcacacaacaagaacggc
ctgggagagagctctgccgtcctcaaggtggccacccagggtgaagtgcaagttcctggc
cccgcccccaacctgcaggctgtgtcgaccacacccacctccgtcaccctcagctgggac
acgcccctcactggcaacggagacgtcctcacgtacaaggtctactatatggagaagggt
ctggacctggaacaggacatagacgctggagctctgtcctacaccttgatgggtctgaag
aagttcacagagtacagcattagagtggtggccttcaacaagcacggtccgggagtgtcc
acaggagacatcaccgtcaccaccctgtctgatgttcccagtgcccctcctcaaaacctc
actgtggaagttcacaactcaaagagcattatggtccggtggcagcccccaccaccaggc
gcccagaacggcgagattactgggtataagatccgttaccggaaaggaacgcggaagagc
gaggcggcagaaacaacgggaggcacccagctcttccaactcatcgacggtctggagcgg
gggacagagtacacgttcagagtgtcagccatcacggtgaacggctcagggcccgccaca
gagtggagcaccgcagagaccttcgagagcgacctggacgagtccagggtgccggacatc
cccagctcgctacatgtgcgcccgctggtcaacagcatcgtggtaagctggacgccgccg
gagaaccaggacatggtggtacgaggctacaccatcggctacggcatcggcagcccccac
gcccagaccatcaaggtggactacaagcagcgctactacagcatcgagaacctagatccc
agctcccactatgtgataaccctgaaggccttcaacaacgtgggggaggggatccctgta
tacgagagcgccatcaccaggccacagtcagaccccatagaccctgatgttgatttgtat
gaactcttccatgctccatacacgccagtaccagaccccacccccatgctacctcccgtg
ggcgtacaggcctcggtgctcagccacgacaccatcaaggtgacctgggccgacaactcc
ctgcccaagaaccagaagatcacggacgcacgctactacacggtgcgctggaagaccaac
atccccgccaacaccaagctcaagacggccaacaccaccaacctgagccacatggtgacg
ggcctgaagcccaacacgctctatgagttctctgtcatggtgaccaagggccggaggacc
agcacctggagcatgacggcccagggaaccacctttgagaccattcccagctcgtccccc
aaagatgtgactgtggtgagcaaggagctgaaaccacgtaccatcatagtcaactggcag
cccccctcagaggccaatggaaaaatcacaggctacataatctactacagtactgatgtg
aatgcggaggtgcatgactgggtgatagagccggtggtgggcaacaggttgacccaccag
atccaggagctgactctggacaccacctactacttcaagatccaggcccgtaactccaag
ggcatgggcccaatgtcagaggccgtacacttccgcacccccaagactgaatcctctgac
aaaatggctaatgaccaagcctccaatttgccagttaaaccaggaagtaaccaaccacct
cttgaccatggctttgggtctccacacggaaaaccaggaattacaggaagtgcggacaac
cacatcctggtcatcgtcgtgatcatctctgtgggagcgttcaccatcattgtggtggtt
gtgggggccttcctctgcacacgacgcaccacctcccaccagaaaaagaagcgggcggcc
tccaagtcatccaacagctcccacaagtacaagggcaactccaaggacctgaagcctcca
gacctgtggatccaccacgagcggctggagctcaagcccattgacaagtcccccgagccc
aacccggtgatgactgacacccccatcccccgcacctcgcaggacatcaaccccgtggac
cccagcctggacaacagcctgctgcagagacggaactcctaccgaggccacgaatcagaa
gacagcatatctgcactggcagggcgccgggggatgcggcctaaaatgatgatgcccttc
gatacgcagcccccccagcccgtgattagcgctcaccccatccattcccttgataaccat
caccaccattatcacacgggcagcttggcatccccgacacgcagctacctccatcaccac
cagggcagtgcccacctgcgcccacacgcctgcgccacccccatctcctatctagacatg
ggctccacagagtcggtgaggaacacccccagcacagagcccctcccgccccaggcccag
cccccctgccaagccgagcaccagcacccggaccccgagggcagctaccaaggctccacg
gccaccgacgatgagcccagcgccagcggcagctactgcagcgccggccagcccctcacc
gcccacgtgcgacccactcaccccctcaagagctttgccgtgcccgccaaccccgccgcc
atcttcgagtcgcccgccctgcccagcacaccgctgcttactcagactgggccccagctc
cactcagtaaagacagcctccatcggcaccctgggcagggtgcgcccccccatgccagtc
acggtgcccggtgcgccagatgtgcccgagaccagcaagatgctggaggatgtagacagt
gtccttgcctccctcccctcctgttcctcccttgctccccgcagtaaccctgttcctttc
cctcagagctacgagcctgatgagttgacagaggagatggcccacctagaggacctgatg
aaggacctgaacgctataaccacagcctga
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