Salvelinus fontinalis (brook trout): 129834874
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Entry
129834874 CDS
T11136
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04350
TGF-beta signaling pathway
sfon04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129834874
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129834874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129834874
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
DCC/UNC5 family
129834874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
Ig_RIMBP2
fn3_SORL1
Tissue_fac
Sp38
EphA2_TM
Herpes_UL74
Bile_Hydr_Trans
Motif
Other DBs
NCBI-GeneID:
129834874
NCBI-ProteinID:
XP_055756187
LinkDB
All DBs
Position
35:40811407..41060721
Genome browser
AA seq
1510 aa
AA seq
DB search
MAERGARLLLSLLCLTFLYPATTVSRHAEKGTAARLFSPFWFSVEPWDTLAVRGAPALLN
CSAHSGDPASEPTVPQARVEWKKDGTFLSLAPDDGRRRVLPDGSLLISSVVHSKHNKPDE
GTYQCVATIDSLGTIASRTARLTVAGMPRFSSQPAAASIRLGDSQVLACDVNPDLVPLAR
WEREREPLELSSRLVQLPNGALVVSNASEADAGLYRCMVENAGPAKTSEEAQLTILPETG
EERELEFLVEPLPVTKVVGASLLLPCVVTGYPAPYVRWMVGDKLVEESEGKLELVGGGSL
LIYNLTEEDAGVYSCMADITNNTIEAKAELTVQVPPEFLKRPANIYAHESMDIMFQCEVT
GSPAPTVKWVKNGDAVIPSDYFKIINEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQL
IILEHDVALPTPPLPSLTPDTTDHVTPGSRGVANPTGPTPSAPRDVVASLVSTRFIKLTW
RPPAEPNGEDLTYSVYFNQEGTNRERILNTSRPGEMQVTIQNLMPDSKYKFRVVAHNKNG
LGESSAVLKVATQGEVQVPGPAPNLQAVSTTPTSVTLSWDTPLTGNGDVLTYKVYYMEKG
LDLEQDIDAGALSYTLMGLKKFTEYSIRVVAFNKHGPGVSTGDITVTTLSDVPSAPPQNF
TVEVHNSKSIMVRWQPPPPGAQNGEITGYKIRYRKGTRKSEAAETTGGTQLFQLIDGLER
GTEYTFRVSAITVNGSGPATEWSTAETFESDLDESRVPDIPSSLHVRPLVNSIVVSWTPP
ENQDMVVRGYTIGYGIGSPHAQTIKVDYKQRYYSIENLDPSSHYVITLKAFNNVGEGIPV
YESAITRPQSDPIDPDVDLYELFHAPYTPVPDPTPMLPPVGVQASVLSHDTIKVTWADNS
LPKNQKITDARYYTVRWKTNIPANTKLKTANTTNLSHMVTGLKPNTLYEFSVMVTKGRRT
STWSMTAQGTTFETIPSSSPKDVTVVSKELKPRTIIVNWQPPSEANGKITGYIIYYSTDV
NAEVHDWVIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTESSD
KMANDQASNLPVKPGSNQPPLDHGFGSPHGKPGITGSADNHILVIVVIISVGAFTIIVVV
VGAFLCTRRTTSHQKKKRAASKSSNSSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEP
NPVMTDTPIPRTSQDINPVDPSLDNSLLQRRNSYRGHESEDSISALAGRRGMRPKMMMPF
DSQPPQPVISAHPIHSLDNHHHHYHTGSLASPTRSYLHHHQGSAHLRPHACATPISYLDM
VGSTESVRNTPSTEPLPPQAQPPCQAEHQHPDPEGSYQGSTATDDEPSASGSYCSAGQPP
TAHVRPTHPLKSFAVPASPAAIFESPALPSTPLLTQTGPQLHSVKTASIGTLGRVRPPMP
VTVPGAPDVPETSKMLEDVDSVLASLPSCSSLAPRSNPVPFPQSYEPDELTEEMAHLEDL
MKDLNAITTA
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcaaggttgctcctctctctcctctgtctcacctttctttacccg
gcgaccaccgtgtcaagacatgccgaaaaaggcacggcggcgcggctcttcagccccttc
tggttctcggtggagccgtgggacacactggccgtgagaggcgccccagcactgctcaac
tgctcagcgcacagcggggaccctgcctcggagcccactgtgccccaggcccgtgtggag
tggaagaaggatggaaccttcctgagcctggcgccagacgacgggcggcggcgtgttctg
cctgacggctcgctgctcatatctagcgtggtgcactccaagcacaacaagcccgacgag
ggaacgtaccagtgtgtggccaccatcgacagcctgggaaccatcgccagccgcaccgcc
cgcctcaccgtggcaggtatgccccggttctccagccagccggcagcagccagcatacgc
ctgggagacagccaggttctggcgtgcgacgtcaacccagacctggtacctttagcccgg
tgggagcgtgagcgtgagcccctggagctgagctctaggctggtgcagctacccaacgga
gccctggtggtgagcaacgcgtcggaggccgacgctgggctctaccgctgcatggtggag
aacgctgggcccgccaagaccagtgaagaggcccagctcacaatactgccagaaaccgga
gaggagagagaactggagttcctggtagagccacttcctgtgaccaaagtggtgggggcc
agtttgctgctgccgtgtgtggtgacgggttacccagcgccctacgtccgatggatggtg
ggagacaagcttgtcgaggagagtgaggggaagttggagttggtgggaggaggcagtctg
ttgatctacaacctgactgaggaggatgcaggcgtctacagctgtatggcagacatcact
aacaacactatcgaggccaaggcagagctcactgtacaagttccaccggagttcctgaag
aggccggccaacatctacgcccacgagtccatggacatcatgtttcagtgtgaggtcaca
ggctccccggcccccaccgtcaaatgggtcaaaaacggagacgctgtcattcccagcgac
tacttcaaaatcattaatgaacacaacctgcaggtgctgggtctggtcaagtctgacgag
ggcttctaccagtgtttggcagagaacgatgcagggaacattcagtccagcgctcaactc
atcatcctagagcacgatgtagccctccccacccctcctctcccctcactgactcctgac
actactgaccatgtaacgccaggctccagaggtgtggctaaccccactggccccaccccc
tccgccccccgtgacgtcgtggcctcgctggtctccacccgcttcatcaagctcacctgg
cgccctccagctgagcccaatggagaagacctcacctactctgtctacttcaatcaggag
ggtaccaacagggagcgtatcctgaacaccagtcggccaggtgagatgcaggtgaccatt
cagaacctgatgcccgactccaagtacaagttccgggtggtggcgcacaacaagaacggc
ctgggagagagctctgccgtcctcaaggtggccacccagggtgaagtgcaagttcctggc
cccgcccccaacctgcaggctgtgtcgaccacacccacctccgtcaccctcagctgggac
acgcccctcactggcaacggagatgtcctcacgtacaaggtctactatatggagaagggt
ctggacctggaacaggacatagacgctggagctctgtcctacaccttgatgggtctgaag
aagttcacagagtacagcattagagtggtggccttcaacaagcacggtccgggagtgtcc
acaggagacatcaccgtcaccaccctgtctgatgttcccagtgcccctcctcaaaacttc
actgtggaagttcacaactcaaagagcattatggtccggtggcagcccccaccaccaggc
gcccagaacggcgagattactgggtataagatccgttaccggaaaggaacgcggaagagc
gaggcggcagaaaccacgggaggcacccagctcttccaactcatcgacggtctggagcgg
gggacagagtacacgttcagagtgtcagccatcacagtgaacggatcagggcccgccaca
gagtggagcaccgcagagaccttcgagagcgacctggacgagtccagggtgccggacatc
cccagctcgctacatgtgcgcccgctggtcaacagcatcgtggtgagctggacgccgccg
gagaaccaggacatggtggtacgaggctacaccatcggctacggcatcggcagcccccac
gcccagaccatcaaggtggactacaagcagcgctactacagcatcgagaacctagacccc
agctcccactatgtgataaccctgaaggccttcaacaacgtgggggaggggatccctgta
tacgagagcgccatcaccaggccacagtcagaccccatagaccctgatgttgatttgtat
gaactcttccatgctccatacacgccagtaccagaccccacccccatgctacctcccgtg
ggcgtacaggcctcggtgctcagccacgacaccatcaaggtgacctgggccgacaactcc
ctgcccaagaaccagaagatcacggacgcacgctactacacggtgcgctggaagaccaac
atccccgccaacaccaagctcaagacggccaacaccaccaacctgagtcacatggtgaca
ggcctgaagcccaacacgctctatgagttctctgtcatggtgaccaagggccggaggacc
agcacctggagcatgacggcccagggaaccacctttgagaccattcccagctcgtccccc
aaagacgtgactgtggtgagcaaggagctgaaaccacgtaccatcatagtcaactggcag
cccccctcagaggccaatggaaaaatcacaggctacataatctactacagtactgatgtg
aatgcggaggtgcatgactgggtgatagagccggtggtgggcaacaggttgacccaccag
atccaggagctgactctggacaccacctactacttcaagatccaggcccgtaactccaag
ggcatgggcccaatgtcagaggccgtacacttccgcacccccaagactgaatcctctgac
aaaatggctaatgaccaagcctccaatttgccagttaaaccaggaagtaaccaaccacct
cttgaccatggctttgggtctccacacggaaaaccaggaattacaggaagtgcggacaac
cacatcctggtcatcgtcgtgatcatctctgtgggagcgttcaccatcattgtggtggtt
gtgggggccttcctctgcacacgacgcaccacctcccaccagaaaaagaagcgggcggcc
tccaagtcgtccaacagctcccacaagtacaagggcaactccaaggacctgaagcctcca
gacctatggatccaccacgagcggctggagctcaagcccattgacaagtcccccgagccc
aacccggtgatgactgacacccccatcccccgcacctcgcaggacatcaaccccgtggac
cccagcctggacaacagcctgctgcagagacggaactcctaccgaggccacgaatcagaa
gacagcatatctgcactggcagggcgccgggggatgcggcctaaaatgatgatgcccttc
gattcgcagcccccccagcctgtgattagcgctcaccccatccattcccttgataaccat
caccaccattatcacacgggcagcctggcatccccgacacgcagctacctccatcaccac
cagggcagtgcccacctacgcccacacgcctgcgccacccccatctcctatctagacatg
gtgggctccacagagtcggtgaggaacacccccagcacagagcccctcccgccccaggcc
cagcccccctgccaagccgagcaccagcacccggaccccgagggcagctaccaaggctcc
acggccaccgacgatgagcccagcgccagcggcagctactgcagcgccggccagcccccc
accgcccacgtgcgacccactcaccccctcaagagctttgccgtgcccgccagccccgcc
gccatcttcgagtcgcccgccctgcccagcacgccgctgcttactcagactgggccccag
ctccactcagtaaagacagcctccatcggcaccctgggcagggtgcgcccccccatgcca
gtcacggtgcccggtgcgccagatgtgcccgagaccagcaagatgctggaggatgtagac
agtgtccttgcctccctcccctcctgttcctcccttgctccccgcagtaaccctgttcct
ttccctcagagctacgagcctgatgagttgacagaggagatggcccacctagaggacctg
atgaaggacctgaacgctataaccacagcctga
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