Salvelinus fontinalis (brook trout): 129835044
Help
Entry
129835044 CDS
T11136
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2-like
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129835044
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
129835044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_NWD2_C
EIF3I
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WHD_NWD1
WD40_WDHD1_1st
Beta-prop_EML_2
AAA_16
NPHP3_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
NACHT
AAA_22
Beta-prop_TEP1_2nd
Beta-prop_ACSF4
Tricorn_2nd
B-prop_COPA_B_2nd
Beta-prop_Aladin
AAA
NPHP3
AAA_28
Motif
Other DBs
NCBI-GeneID:
129835044
NCBI-ProteinID:
XP_055756360
LinkDB
All DBs
Position
36:complement(2239766..2330087)
Genome browser
AA seq
1733 aa
AA seq
DB search
MWPSGVGSRQPCPRESALRRAAISGNILALPQHHVPTGRSVRVFICANPDDTEAERNALK
EHVYPKLRDFCRENYGIEFQVVDLYWGVDPEEWDSPDLQRLRMKLLEECLQTSAGPCFVG
LVGEKYGSFRVPGEVEAPEFERILDAAVEAGLDTHILEEWYCRDENAVPPAYYLKPKGQM
LKNFQNSMESSSAAKMKNDKAWRNVSEEIKRIFRRSVLQLQEKGTMKPPQAKKFLCSALE
DELDFALGKQTPAFLKKCVCYIRKISNFDRHAKLPEMAKYMDIVVAEDRVMRNQEAYERL
LKVRDEFIPTVVASSNLRVYSSVTHCDMKLGYSQEVESHYVEGLCKQFYEDMVDIIQATV
QQNFDTETDPLYDEILQHLSLCQNFSAFYDYKSETLDLVQEYLLPSKESGMSPLVVYGGP
CTGKTLLLAEVAKQANAWLQTEMGPETDPVVIVRFVGSSECATNLRTLLQSICEQIAINY
RCLIHFLPNKIQEMRELLVNLLGEPSFHRPLVIILDALEQLSEADEARKLWWLPAHLPRT
VRIVVSTLPNKHGILQKLRCLIHDEGRYVELVQWDRKACSQILKQQLLGLKRKVTSGQQI
YVNEALAKCTLPMFVNLIYQEVVHWRSHKDVDDRSLCSTVHESIEQLFYSVENKLGQRFV
FRALGYITMANVGLTEVELEDILSLDNSVLGDIMVSSNLKNPLRISYDLVARLKEELEGY
LLERQVHNVTLMVWANRHLQLIAQKLYLSNEEDVHQMHSLLAEYFLGAWSGGRKKIFHCD
NNHFASLNISQHKNPHSQQPSHKEASAEKYSYDRQTPEQPWVFQCNLLEPDIFFVNHRKM
TELLYHLTRSGRMDDLMYGVIMNFSWLYTMIKIGQFEKALTDIDVAYNYSQEKELKFLAT
TLRSIKIKVMKNPASLSAELQQRLLPVVTSLPKLQHLLLECDKDGPKYCSIVPLHSSMDV
TYSPERLPLCSSSMQIVEILPTLAPNIVLVALEDGSVSTWDVESRQLLRQIDTAHSVVLG
IRLTSDEKYLVVATTKNTLLIYDNHKSCLLSEVDIKSSKHCGITGGVAFINGFTLSSHHA
LAWLEASKDVDVIDLLYGWPLYQFHCWYEVTCVQCSPDGMYAFCGQYLNTTSIFHLGTGD
KLATVTSEFSGGFVKSILVLDTIHQMVMIDNEGSLSVWNTKEITNPRLMEDYDCRGDENE
VVGIELSEDQRSILICKDKSIEVLDTKLWKMAEKFKAKHAERFVAAVLSKNGQSIVASME
NTSSIFVWRRDSGQCMASLIEISGAIVKLIKSIHHNLLLSVASSGVLSVWDIDIITAMSN
IDKTGKRIQSLQLSGREDFVFTMDGSEAIHKWNFSTGFIETVFKHEGLVENCVLTSTGDL
MVTSDDKCSQYIWRTANGENIFRINGQKISQLLMTHNDQFVVSLCEQNCSRVWRLATGHK
VCNILVTLQNALITTANTFLVGITKNKLLAVSLWSGSISKKFVCDDGISIINFKLIPDCP
DFVVFITSTETVFIWSVADESVCRRVQLPTNFLNNLEEFQISPNGKLGIISKGDENINVL
DLHSGKLRLVHAAGIIWRQKLSRDGRYLVYVCFRNSDEDDEVGVVSHLIVMRLADGKSIG
TCSLYKTPTFLCLSQRALNIIIGFEDGSIGTYTVVDRVDAALKIKIATSNSRQIVNNASQ
KIRPKCGNHTFKTIADCLWRESTEVFSRDSPINVSDSGEAETTTPTKKSELLQ
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgtggccctcgggagtggggagcaggcagccctgtccacgggaatcggcgctccgcagg
gcagccatcagtggcaatatcctcgcactgccgcagcaccatgtccccactggcaggagt
gtccgggttttcatctgcgccaaccccgacgacacagaagcagagaggaatgcactgaag
gagcatgtatatcccaaactacgagacttctgcagagagaactatgggattgagttccag
gtggtagacctgtactggggggtggacccagaggagtgggacagtccagacctgcagcgt
ctgaggatgaagctactagaggagtgcctccagacctccgcaggtccatgttttgttggg
ctggtgggggagaagtatggcagtttccgcgttccaggggaagtggaagctccagagttt
gagaggatcctggatgcggcggtggaggcggggctagacacacacatcctggaggagtgg
tactgccgagacgagaatgccgtgccaccagcctactacctcaaacccaaaggccagatg
ttgaagaacttccagaactcaatggagtcgagtagtgcagccaagatgaagaacgacaag
gcgtggaggaacgtgtctgaggagatcaagaggatcttccgtaggtctgtcctgcagctc
caggagaagggcaccatgaagccccctcaagccaagaaattcctctgctctgccttggag
gatgaactggacttcgccttgggcaaacaaacgccagccttcctcaagaagtgtgtctgc
tacatccgcaagatctccaacttcgaccgacatgccaagctcccggagatggccaagtac
atggacatcgtcgtcgctgaggaccgcgtcatgcgtaaccaggaagcctacgaacgtctc
ttaaaagtgcgggatgagtttatcccaacagtggtggcctcatcaaacctccgcgtctac
tcctctgtgacgcactgcgacatgaagctaggctactcccaggaggtggagagccactac
gtcgaaggcttgtgtaaacagttctacgaggatatggtggacatcatccaggccacggtc
cagcagaactttgacacagagacggaccccctgtacgatgagatcctccagcacctgtcc
ctgtgtcagaacttctctgcgttctacgattataagagcgagacactggacctggtgcag
gagtatctgctaccatctaaggagagtgggatgagccctctggttgtttacggcgggcca
tgcacggggaagacactgctgctagcggaggtggccaaacaggccaacgcgtggctccag
acggagatgggccctgagacagacccggttgtcattgtccgctttgtgggctcctccgag
tgcgccacaaacctgcgcaccctcctccagagcatctgtgagcagatcgccatcaactac
cgttgcctgatccacttcctgcccaacaagatccaggagatgagggagctgctagtcaac
ctgctgggggagccctctttccatcggcccctggtcatcatcttggatgccctggagcag
ctctcggaggccgacgaggcccgcaagctgtggtggctccccgcccacctgcctcgcact
gtccgcatcgtggtctccactttacccaacaaacacggaatcctccagaagctccgctgt
ttgattcatgatgaagggcgctacgtagagctggtgcagtgggaccgtaaggcctgtagt
cagatactgaagcagcagctgctggggttgaagagaaaggtgacttcgggacagcagatc
tacgtcaatgaagcgctggccaagtgcacgcttcccatgtttgtcaacctcatttaccag
gaggtggtgcattggcgctcgcacaaggatgtggacgaccggtcactgtgctccaccgtg
catgagagcatcgagcagctcttctactctgtggagaacaagctggggcagcggttcgta
ttcagggcgctgggatacatcaccatggccaatgtggggttaacggaggtagagctggaa
gatattctgtcattggataacagtgtgttgggagatatcatggtgagttcaaatctaaaa
aacccactgaggatctcttatgacctggtggcgaggctgaaagaggaactggaggggtac
ctgctggaaaggcaggtgcataatgttaccctgatggtgtgggccaacagacacctgcaa
ctcatcgcccagaagctgtatcttagcaacgaggaggatgtgcaccagatgcacagcctc
ctggccgaatacttcctgggggcatggtcgggaggcaggaaaaagatcttccactgtgac
aacaaccactttgcctcgcttaacatctcccaacacaagaatccacactcccagcaaccg
tcccataaagaagcatccgccgagaagtactcctatgacaggcagacccccgagcagccc
tgggtgttccagtgcaacctcctggagcctgatatcttctttgtcaaccacaggaagatg
acggagctcctctaccatctaactcggagcggccgcatggacgacctcatgtacggggtt
atcatgaacttcagctggctctacaccatgatcaagatagggcagtttgagaaggcactg
accgacatagatgtagcctacaactactcccaggagaaagaactcaagtttttggccacc
acgctgcgcagcatcaagatcaaagtgatgaagaacccggcatccctgtccgcagagctg
cagcagaggctcctccctgtggtcacctctttacccaagctccaacacctcctcctggaa
tgcgacaaggacggccccaaatactgctccattgtgcccctccactcctccatggatgtc
acctacagccctgaaaggctgccgctgtgctccagctccatgcagatcgtggagatcctg
cccaccctagcccccaacatcgtacttgtggccctggaggatgggtctgtgagcacatgg
gatgtggagagcaggcagctcctccggcagatagacacggcccattcggttgtcctggga
atcaggctaaccagcgacgagaagtacctggttgtggcaaccaccaagaacacgctactc
atatatgacaaccataagtcttgcttgctgtctgaagtggacatcaagagctccaagcac
tgtggtatcacaggaggggtggccttcatcaatgggttcaccctgtccagccatcatgcc
ttggcctggctagaggccagtaaagatgtcgatgtcatcgatctgctctacggctggccc
ctctaccagttccactgctggtatgaggtcacctgcgtccaatgctccccggatggaatg
tacgccttctgtggtcagtacctcaacaccacctccatcttccatcttgggactggggac
aagctagctacggtcacgtcagagttctccgggggatttgtcaagtccatcttggtcctg
gacaccattcaccagatggtgatgatcgataatgaggggagcctgtcggtgtggaacacc
aaagagatcaccaaccccagactgatggaagattatgactgccggggggatgagaacgag
gtcgtaggcattgagctgtcagaggaccaacgctccattctcatctgcaaagacaagagc
attgaggtcctggacaccaagttgtggaagatggcagagaaattcaaggccaagcatgct
gagcgattcgtggctgcagtcctctcaaaaaatggccaaagtattgtggcctccatggag
aacacgtcatccatatttgtgtggaggagggacagtgggcagtgcatggccagcctgatt
gagatctctggggccatcgtcaaactcatcaagtccatccaccacaacctgctcctgtct
gtggccagcagtggagtgctatcagtctgggacattgacatcattacagccatgtccaac
attgacaaaacaggcaagaggatccagagcttacagctttctggcagggaggactttgtg
ttcaccatggacggctctgaagccatccacaagtggaacttcagcacaggcttcatagag
actgtcttcaagcatgagggcttggtggaaaactgtgtcctgacatccactggggatctc
atggtgacgtcggatgacaagtgcagccagtacatctggcgcacggccaatggcgaaaac
atctttcgcatcaacggacagaagatatctcagctcctgatgacccacaatgaccaattt
gtggtttccctctgcgaacagaactgctcccgagtctggaggctggccactggacacaag
gtgtgcaacatcctggtgaccctacagaatgcactgatcaccaccgcaaacaccttccta
gtggggatcaccaaaaacaagctgcttgctgttagcctctggtcaggcagtatttccaag
aagtttgtctgtgatgatggcattagcattatcaacttcaaactcattcccgactgccca
gactttgttgtcttcatcacatctacagagactgtgtttatatggagtgtggcagatgag
tctgtctgcagacgggtccagctgcctactaacttcttaaacaatctggaggagttccaa
atttcaccaaatgggaaactgggcatcatctccaaaggtgacgagaacattaacgtgttg
gatcttcatagcgggaagctgaggcttgtccacgccgctggtatcatctggcggcagaag
ctgtcgagggacgggcgctacctggtctatgtctgcttccgaaacagtgatgaggatgac
gaggtgggcgtggtgtcccacctgatcgtgatgcgtctggcagacggaaagagcatcggg
acatgctccctctacaagacgcccaccttcctctgcctgtcccagcgagcactcaacatc
atcattggcttcgaggatggcagcatcggcacctatacggtggtggacagggtggacgcc
gcgctcaagatcaagattgccacatccaacagtcggcagatcgtcaacaatgcctcacaa
aagataaggcccaagtgtggcaaccacaccttcaagaccattgcagactgcttgtggagg
gagtccaccgaggtcttctccagggatagccccatcaacgtgtctgactctggggaggct
gagaccactacccccaccaaaaagagcgaactgttgcagtga
DBGET
integrated database retrieval system
