Salvelinus fontinalis (brook trout): 129835227
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Entry
129835227 CDS
T11136
Name
(RefSeq) low-density lipoprotein receptor-related protein 10-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129835227
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
129835227
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Phage-tail_3
Motif
Other DBs
NCBI-GeneID:
129835227
NCBI-ProteinID:
XP_055756728
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Position
36:13189466..13197206
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AA seq
817 aa
AA seq
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MTASFNLCVLNVLFVTAYSSLELASSTAHCGQSPQVLEAPRGDIRSSVHHSWSYRPRPFN
CSWIIKAHVGEPVILSFSQFSTRCKKEWVSVTSSTGKPITLCGSDLPKPMELMGGNITVT
HHFLPHLFPVSAFCLGYVRDSGECPVVDFECLGGRCLPLSWRCNGRTECLGEGMGLGTDE
QDCDGEIEILDPEHDKVVATTTTPDSYIETEGETGREKNGGRDWETAPVEVEKEEKEVEE
DGDYTKVKETDNPIEDYWEYLPRQLPSPEPHRAHPSPGVTRAPIEWPCGGLLQTFYGTFA
PPSIKGPPLFCVWTLDPQDSRPLKLDLQLLELGPGDTVTITNRQQGTGELIKTITSESSY
KAIQVESRTGLLSLTYRTLPGSEGLGFNATYRVGGYCPPWEGKCGGAAGGCYTQEQKCDG
RWDCPETGHDEAGCRGCPRDQFACGGVGQRAVLAGHNFIGRPVCFPAKERCNYQLYCADG
SDEKDCTICQPGTFHCDSNRCVFESWSCDGQVDCKDGTDEMNCTMTLPRKVITAATVGSL
VCGLLLVIAMGCTCKLYSLRTREYSMFAPISRQEAELIQQQAPPSYGQLIAQGIIPPVED
FPTENPNESSSLSLRGFLQLLRQDTSNSPRRRRRPRFIRRAVRRMRRWGLIPRSASRPSQ
PSSSAPQMTEAPSTGVDPSQSTPATTSLAVEAVNLPLPQKLGLLPQTVQYQPPPPPHFLP
PPTLLPPPIVSTPATPQSPPVAVPPTPSSPSLASLFHSLGRTISRFRSSPSSSPTNSLPL
STSPSFSSSSSEDEVLLIPLSEDTTPEDDVPLLTLDP
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctctttcaacctctgtgtcctcaacgttttgtttgtaactgcctacagcagc
ctggagctggcctccagtactgctcattgtggacaatctccccaagtcctggaagccccg
aggggagatatcagaagctccgtccaccacagctggtcctatcgcccacggccgttcaac
tgtagttggattatcaaggcacacgtaggagagcccgttatcctcagtttctcccagttt
tctacacgctgtaagaaggaatgggtctcggtgacgtcatcaactggcaagcccattacc
ttgtgtggttccgacctgccaaagcccatggagttgatgggggggaacattacagtgaca
caccacttcctgccacacttattccccgtctctgcattctgcctgggctacgtcagagac
tctggtgaatgtccggtggtggactttgagtgtttgggcgggcgctgcctgcccttgtcc
tggcgctgtaacggccggacggagtgtctgggtgaagggatggggctgggaacagacgag
caggactgtgacggagagatcgagatcctggatcctgagcacgacaaagtagtggcgacc
accaccacaccagattcctacatagagacggagggggagaccggaagagagaagaacggg
gggagggattgggaaacggcaccggttgaggtggagaaagaggagaaggaagtagaggag
gatggggactacaccaaggtaaaggagacagataatcctatagaggactactgggagtac
ctgcctcgtcaactccccagccccgagcctcatagagcccaccccagtcccggtgtgacc
cgggcccccattgagtggccatgtggcggcctcctccaaaccttctatgggacgttcgcc
cctccttccatcaagggccctcctctgttctgtgtgtggaccctggacccccaggactcc
aggcctctgaagctggacctgcagctgctggaactggggcctggagacacggtcaccatc
accaacagacagcagggcaccggggagctcatcaaaactatcaccagcgagtccagttac
aaagccatccaggtcgagtcccggactggccttctctccctgacctatcgcacgctcccc
ggctcagaggggctgggcttcaacgccacctaccgtgtcgggggctactgccccccctgg
gagggtaaatgtgggggtgccgcggggggctgctacacccaggaacagaagtgtgacggg
cgctgggactgtcctgagacagggcatgatgaggcgggatgcagggggtgtcccagggac
cagtttgcttgcggaggggtggggcagcgggcggtgctggctggtcataacttcataggg
cgtccggtgtgcttccctgccaaggagaggtgtaactaccagctgtactgtgctgacggg
agcgacgaaaaagactgtaccatatgtcaacctgggaccttccactgcgacagcaacagg
tgtgtgtttgagagctggagttgtgacggccaggtggactgtaaggacgggacagacgag
atgaactgcaccatgaccctgcctcgaaaggtcatcaccgcggcaaccgtgggcagcctg
gtctgtgggctgctgctggtcatcgctatgggctgcacctgcaagctctactcactgcgg
acccgagaatatagtatgtttgcgccaatcagccgccaggaggcggagctaatccagcag
caggcccctccctcctatggtcaattgatcgcccagggcatcatccctccagtggaggac
ttccccacggagaaccccaacgagtcttcctctctttctctgagaggttttctccagctt
ctcagacaggatacttctaactctccacgacgccgacgccgtccccgattcatccgccgg
gctgtccgtcgcatgcggagatggggcctaatccccagatccgcctccaggccctcccag
ccatccagctctgccccccagatgacagaggccccctccactggtgtggatcccagtcaa
tcaactcccgccaccacctcattggctgtggaagccgtcaatctgccattgccacagaaa
ctaggcttgctcccacagacagtgcagtaccagccacccccacccccccacttccttcct
ccacccactctactccctccacccattgtctctaccccagccaccccccagagccctccg
gtggctgtcccccccacacccagcagcccctccctagcctctctctttcactctttgggg
cgcactatctctcgcttccgctcctccccttcctcctcccccaccaactcactgcccctc
tccacatccccctctttctcttcctcctcttcggaggacgaggtgctacttatccccctc
tccgaggacacaaccccagaggacgacgtgcccctgcttacactcgacccctga
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