Salvelinus fontinalis (brook trout): 129835368
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Entry
129835368 CDS
T11136
Name
(RefSeq) rho guanine nucleotide exchange factor 11-like isoform X1
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
129835368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129835368
Membrane trafficking [BR:
sfon04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129835368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
PDZ_2
RGS
Pept_S41_N_bact
Rep_fac-A_C
Motif
Other DBs
NCBI-GeneID:
129835368
NCBI-ProteinID:
XP_055756973
LinkDB
All DBs
Position
36:19429997..19456185
Genome browser
AA seq
1455 aa
AA seq
DB search
MSLRTPTSTLDSPFAAWLSSLTIGDSERNTSSGQQREPPADVPTENTGPGLVQRCVVVQK
DQLGFGFTVCGERIKLVQNVRPGGAAVKAGVHEGDRIIKVNGSLVSSMSHQEVVKLIKSG
PYVALTLQGPPPSAAALDLQPLPADLLPNQMTSLEGEAPPPPPPPLPPGLTSTPSQRINK
PLQNLDVQKHATEILRNMLEQGEAELQDLMEELSRNPSPSLEERIESAKRRAQQVRVKIK
QDLDGTRPEAVSNYVIAGDARLSVDSSEGDIQTCESPHSSPSFFRTPLRQGSDTHTFSDS
AGKTQIIGPEEEEDDSYALNEMDGPFQDIELLKSRPAHMMVFMRYVFSQLLDPNSLLFYL
SVEAYLGSSPKDARALAPQICSHFLDPDALLKIRVREEYLTDIESRLHAQEDIRGPLSDL
QQQLLPDIQDQIQDYRNKQMMGLGSLFGEGDLQQLDGDPAKEKQVVDRQVTALWEMLSKH
EDDRSSPLASAVLLYLRHSGIKLRDSRVFPGLSTEKEKWLAFFPKTKKLSSAKKEKDGED
RKRNPILKYIGKPRSTSQSTFHIPLSPTEVRPGSVRNIIQQFENHPEIPGEEGDEGDLQR
LSSSSLGEDSMDSPMVSVRLARSESLKAQGEGRRRGGASGVETVPRSRSDVDMEDCGEEI
EGPGLRPLHHSASSSATSSSARSLENPTPPCTPRSSRRQFEESPVALLPDAPSLEDDVVD
SHNWQETVAPQVLATLCPREVDRQAIIYELLTTEASHLRTLRVLDQVFFQKMRCVLSSDE
LACIFPNLPQVYQLHVSLCEAMKKKRESPIVQGIGDIILARFEGVAGEEFQEQASHLCSQ
QSQALELIKNKQRKDPRFTHIIQECEASPHCRRLQLKDLLVSETQRLTKYPLLLDNIIKH
TEAGSTDLPPLQQAQACCRGILQAVNEVVRETEHRQRLNQYQRRLDPTPQFKSLDLTSKT
MIHEGPLTWKVNKDKTLEIQALLLSDLLVLLQRGPDDRLLLRCPSRWLGGGGGGSGETKA
SFSPVVQLDSLLVRSVATDNKALYIISTTERKIYELVAGTSSEKNIWKDQLEKTISLVAG
SSPSTNNRSTPVFSPSLGNASPVSAGSHVYQSDDSMTEQVVFMETDSPNDEDNELARTTP
TDQSGAFLCGEGRDYVKRRIGVAEAALEDVETLRQLIFRDLEEDRWSHGSDGTPTNEAAN
ERSPFNDQQRPTSSETLLSVSPSQWEAEHAEAPPSEMESPSVHVVRKAVVAGSPSIPVDI
TEDVTLHSDQSPEPRGEASVRGNVFYLVMPTEQGEGLLDESHTDEVNDPPTPTTTELPDL
EQEVISSPVQTHEKEGQVASIMSADNQSERGNLSRQEGQSQSRKSLQSHIIKNVDDIFHT
IEELMRKLHQLRDIETAHHQLLKTLREPPVNPESGDLFRIQATVIRTPFLDRDPGDGKEA
SPAEPAKLKILSTGF
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgcacccccacctcaacactggacagcccttttgctgcttggctaagcagc
ctgacgataggagactcggagcgcaacacctccagcggccagcagagggagcctcctgct
gacgtccccactgagaacacaggtccaggtctggttcagagatgtgtggtggtacagaaa
gaccagctggggtttggcttcaccgtgtgtggcgagaggatcaagctggtgcagaatgtc
cgaccaggtggtgcagcggtcaaggcaggggtccacgagggagacagaatcataaaggtg
aacggctcgttggtgtcgtccatgtctcaccaggaggtggtgaagctcatcaaatctggg
ccgtatgttgccctgacacttcaaggaccgcccccttcagcagccgccctcgacctacaa
cccctccccgctgacctcttacccaatcagatgacgtcactggaaggtgaagccccacca
ccaccacctccacccctgccccctggacttaccagcaccccctcccaaagaattaacaaa
ccactacagaacctagatgtacagaaacacgccacagagatcctcaggaacatgttggaa
cagggagaggctgagctccaggacttgatggaggagctgtcacggaacccctccccatca
ctggaggagcgaatcgaaagtgccaagaggcgcgcccaacaagtgcgggttaaaatcaag
caagatctggatggaactcgccccgaagctgtgtccaactatgtaatagcaggagatgct
cggctgtcggtggactcaagtgaaggagacattcagacctgtgagagcccccactcctcc
ccctccttcttcaggacccccctacgacagggctccgacacacacaccttctctgactcg
gctgggaagactcagatcattggccccgaggaggaagaggacgacagctatgcactcaat
gagatggacggtccatttcaggacatagagcttctcaagtcgcgaccggcccatatgatg
gtgttcatgagatatgtcttcagccagctactggatcccaactcactgctgttctacctg
tcggtggaggcctacctgggctccagccctaaagacgcccgtgccctcgcgcctcagatc
tgctcccacttcctggaccctgacgctctgttaaaaatcagagtacgagaagagtacctg
actgatatagagagtcgtctccatgcccaggaggacatcaggggacctctgtctgatctc
caacagcagttgctgcctgacattcaggaccaaatacaggactacaggaacaagcagatg
atgggtctgggctctctgtttggagagggagacctgcagcagctggatggagacccagcc
aaggagaaacaggtggtggacagacaggtcactgctctctgggagatgctctcgaagcac
gaagacgacagaagttctcctctagcctctgcggtgctgctgtacctccgtcactcgggc
attaagctgagggactccagggtgtttccaggactcagcactgagaaggagaagtggctc
gcctttttccccaagaccaagaagctgagcagtgcaaagaaagagaaggatggagaggac
aggaagagaaaccccatcctgaagtatatcggcaagcccaggagcacctcccagtccacg
ttccatatccccttgtcgcccactgaagtgcgtcctggcagtgtgaggaacatcatccag
cagtttgagaaccacccagagatccccggggaggagggggacgagggagacctccagaga
ctgtcctccagcagcctgggagaggacagtatggacagccctatggtgtcggtgcgtctg
gctcgtagcgagtctctgaaggcgcaaggggaggggcgtcggcggggcggggcttcagga
gtggagacagtccctcgttcccgtagcgacgtggacatggaggactgtggggaggagata
gaggggccgggcctgagacccctacaccacagcgcctcttcctcagccaccagtagctca
gcacgatccttggagaaccccacgcctccatgcacccctcggtcgtctagacgacagttt
gaggagtccccggtggccctgctccctgatgccccatccctagaggatgacgtggtggac
agtcataactggcaggagacagtggcccctcaggtcctggctactctctgtccccgagag
gtggatcgacaggccatcatctacgagttgttgacgacagaggcgtctcacctgcgtact
ctcagggtcttggatcaggtgtttttccagaagatgaggtgtgttctgagctctgacgag
ctggcctgcatcttccccaacctgcctcaggtctaccaactacatgtgagcctgtgtgaa
gccatgaagaagaaaagggaatctcccatcgttcagggcatcggtgacatcatactggcc
aggtttgagggcgtggcgggggaggagtttcaggagcaggcgtcccacctgtgcagccag
cagtctcaggctctggaactcattaagaacaagcagcgcaaagaccctcgcttcacacac
atcatccaggagtgtgaggccagtcctcactgtaggaggctgcagctgaaggacctgctg
gtgtctgagacacagagactcaccaagtaccctctgttactggacaacatcatcaaacac
acagaggctggctccacagacctcccgcctctccaacaggcacaggcctgctgccgcggg
attctgcaggccgtcaatgaagtcgtcagggagactgaacaccggcaacggctcaaccaa
taccagcgcaggctggaccccacgccacagttcaagagtctggacctgaccagtaagaca
atgatccatgagggtcctctcacctggaaagtcaataaagacaaaactttagagatccag
gccctgctgctatcagacctgctggttctgctccagagaggtccagacgaccggctgctg
ctacgctgcccttcccgctggctggggggaggaggaggtggtagcggggaaaccaaggcc
tccttcagccccgtggtccagctagactccctcctggtgcgctctgtggccacagacaac
aaggccctgtacatcatcagcaccacagagagaaagatctatgaactggtagcggggacg
tcctcagagaaaaacatctggaaggaccaacttgaaaagaccatctcattggttgctggc
tcctcaccttcgaccaataacagatccacacctgttttctccccaagtcttggcaacgct
tcccctgtctcagctggcagccatgtctatcaatcagacgactcgatgacagagcaggtg
gttttcatggagacggactcccctaacgatgaagacaacgagctcgcacgcaccacacca
acggaccaatcaggagctttcctctgcggggaggggcgggactacgtcaagcgacgaatt
ggagtagcagaggccgctctggaagatgtggagacgctaaggcagctgattttccgcgac
ctggaagaagatcggtggagtcacggctcagatggcacgcccacaaacgaggcagccaat
gagaggagcccgttcaatgaccaacagaggccgacgtcctctgagactctccttagcgtc
agtcccagccaatgggaggctgagcacgcagaagccccgccctcggagatggagtccccc
agtgtgcatgttgtgaggaaagctgtggttgcgggctccccttctatccctgttgacatc
actgaagatgtcaccctccactctgaccaatcacctgagccgagaggcgaggccagtgta
cggggaaacgtgttctacctggtgatgcctacagagcagggagagggactgctggacgag
agtcacacagatgaggtcaacgacccccccaccccgaccaccactgaacttcctgatctg
gaacaggaagtgatttcatcgcccgtacagactcatgagaaagaagggcaggtcgcttcc
atcatgtctgcggacaatcaatcggagaggggaaatctgagtcggcaggaagggcagagt
cagtcacgaaagagcctccagagccatataatcaaaaacgtggatgacattttccacacc
atcgaggagttgatgagaaagctacaccagctgagggacatagagacagctcatcaccag
ctcctgaaaacactgagagagccgcctgtcaatccagagtctggtgacctctttcgtatc
caggcaaccgtcatcaggacaccgtttctggaccgggacccgggggacggaaaggaggcg
agcccagcagagccagccaagctgaagatcctctccactggattctaa
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