Salvelinus fontinalis (brook trout): 129836076
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Entry
129836076 CDS
T11136
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfon03009
]
129836076 (rrp12)
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
90S particles
Other 90S particles
129836076 (rrp12)
Pre-60S particles
Other pre-60S particles
129836076 (rrp12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
129836076
NCBI-ProteinID:
XP_055757823
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Position
37:8944273..8967725
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AA seq
1289 aa
AA seq
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MVKSGKLKSGAASKLKRWKKGHSSDSNPQTNRFRQAAKSRFFSRPSEKSDLTVDALKLHN
ELQAGALERDDRGDACMEETAEQALSERSAGTFLSGLSDCSNLTFRKVQRFWESNSAAHK
EICAVLAAVTEVIRSHGGKETETEYFAALMTTLEAVDSGESLAAVAYLLNLVMKRVPAPV
LISKFSDTAKALMDVMSTLASSESASALRWILSCLSTLLRKQDVTVWSYPSTLQTYHGLL
SFTVHSKPKIRKAAQHGLCSILRGSDLLFTDNAPAHHPAAAMAAKFCIKEIEQAGGSKED
TTTLHVLGLLKDLMVTFPLNAVKSCCETLLRVMTLSHVLVTACAMQAFHKLFSGKPNPAT
LSAELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLASVQSSLSLGHLPRLFSTAM
SCLLSPHTQVVSAATNTLKTLLSECVAPHMEEIGPVSLTASSGNPSYVCKMFRIVEEGLS
YRFHASWPFVLQLLGCFYRAAGKHTHPVMTKSLQSLADLRATPRFPFCGELDLAVGGAVE
SMGPEVLLNAVALNITGLEDNLEFPRSWLIPVIRDHVKNTHLAYYTSYLLPLAATLRQRA
EELEKAGQKLEAKVYKTLQLQIWTMLPGFCVGPLDLLVSFKGVARALGMAINERPDLRLT
ICQAIRTLITKSCNTDEEKAEVGRFAKNFLPILFNVFSQQPAPGDSAPYRMAVLDTIKVY
LTVTDPQMVCTFLSKATERLSSPDSTEFIRMSVMDLMVAMAPCVDEVTMSQTFELIRPYL
ENKEPHMQKKAYRVLEEMCGGEREECRSFVLSHLETLKHVLLGTLKTASSPAKRPRLKCL
IHIVKQLSDEHRDFITALLPEVIICTKEVSVGARKNAYTLLVEIGRAFIRFCGDAKEALE
QYLLLVYVGLTGSVTMITCTVLALTRLVFEYKDSIDMGSMEHLLHNVCLLLTSHTREIVK
AALSFVKVILFIMDPTTLAGHVTVMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFELV
KSKLPVEHHKVLVNIRKAEARTKRSRLADEDHDDSDSGDDTPKARGESIEEILADSDSDM
SDDERPKGAKTQRKPTKQKGRAWLKEGHGDDPLNFLDPTVSQRVLATNPNMKKRAKVQHS
FKVTSDGRLIIKEDNDEGVKTKDDEGEMKDILEEAGVKSIKTKKRRFQDGHYDDDMEIEP
QLKYKAGGSGIHRPLGGSRDLGGDYKAKKGKGDVKRKGKVEPYAYIPMRKAQLNRRKKAK
MQGQFKGMVRGAKKGAQSGKKMQRNKRRA
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatctggaaaattaaaatctggggccgcatcgaaactgaagcgatggaaaaag
ggacacagcagcgactcgaacccccagacgaaccgattcagacaggctgccaaaagccgt
ttcttcagccgcccctcggagaagagtgacctgactgttgatgcactcaaactgcacaac
gagctgcaggcaggagccctggagagggatgaccggggagatgcctgtatggaggagact
gcagagcaggccctttcagagaggagcgcagggaccttcctcagcgggttgtcagactgc
tctaacctcaccttcagaaaggtgcagcgcttctgggagtccaactcggctgcccataaa
gagatatgtgcagtgctggctgcggtgactgaggtgattcgatctcatggagggaaggag
acagaaacagagtactttgccgctctgatgaccaccctggaggcagtggattcaggggag
tctctggctgctgtagcctacctcctcaacctggttatgaaacgagttccagcaccagtg
ttgatttctaagttctctgacacggccaaagctctgatggacgtcatgtccaccctggcc
agctcagagtccgcctccgcactcagatggattctgtcgtgcctctccactcttttgcgg
aagcaggatgttacagtgtggagttacccatcgactctgcagacataccacggtctactc
agcttcactgtccacagcaagcccaagatccgtaaagcagcgcagcacggtttgtgttcc
atcctgagaggcagcgacttactgtttacagacaacgccccggcccaccaccctgctgcc
gcgatggccgccaagttctgcatcaaagagattgaacaggcaggaggcagtaaggaggac
accaccaccctgcacgtcctgggtctcctgaaggacctcatggtcaccttccctctcaat
gccgtcaagtcctgctgtgagactcttctcagggtgatgacccttagccacgtgttggtg
acagcatgtgccatgcaggccttccataagctgttcagtgggaaacccaaccctgctacc
ctgtctgctgaactcaatgctcagatcatcacggccctgtatgactacctgcccagtgag
aatgacttgcagcctctactagcctggctggctgtcatggagaaagcccacgttcacctg
gccagtgttcagtcgtctctaagtctgggtcatctccctcgtctcttctccacagccatg
tcctgcctcctgtcacctcacacacaggtcgtctctgctgccaccaatacactcaagaca
ctgctgtcggagtgtgttgcccctcacatggaggagatcggtcccgtcagcctcaccgct
tcctctggaaacccttcctacgtctgcaagatgttccgtatcgtggaggagggtctgtcg
tatcgtttccacgcctcctggccgttcgttctgcagctgttgggctgcttctacagagca
gcagggaaacacacgcacccggtcatgaccaagtctctccagtctctagcggacctacgc
gccacccctcggttcccgttctgtggtgagctggacctggctgtcggtggcgctgtagag
agcatgggacctgaagtactgctgaacgctgtagcgctcaacatcactggactggaagac
aatctggagttccctcgtagttggttgatccctgtcatacgcgatcacgttaagaacacg
cacctggcttactacacgtcatatctcctgccgctcgctgccacgctccgacagagagct
gaggagctggagaaggctggacagaaactggaggctaaagtctacaagacactccagctg
cagatctggaccatgctgccagggttctgtgtggggcccttggacctgctggtgtcgttt
aaaggtgtagcaagggcactgggcatggccatcaacgaacggcctgatctacgactgacc
atctgccaggccatacgcacactcatcactaagagctgtaacaccgacgaggagaaggcg
gaggtggggcgttttgctaagaacttcctgcccatcctgttcaacgtgttcagtcagcag
cctgctccgggagacagtgccccctacaggatggctgtcctagacaccattaaagtctac
ctgactgtcacagacccacagatggtgtgtaccttcctatcgaaagctacagaaagactc
agcagcccagacagcactgagttcatacggatgtctgtcatggacctgatggttgccatg
gcaccctgtgtagatgaggtcacaatgagtcagacctttgaactgattcggccatacttg
gagaataaggagccacacatgcagaagaaggcataccgcgtattggaggagatgtgcggt
ggggagagggaggagtgtagatctttcgttctctctcacctggagacgctcaaacacgtt
ctgctggggacactgaagactgcttcgtctcccgccaagaggcccagactaaagtgtctg
atccacattgtgaaacagctgagtgatgaacacagagacttcatcactgccctgctacca
gaggtgatcatatgtactaaggaggtgtcagtgggagctcggaagaacgcctacactcta
ctggtggagataggacgcgcttttatcaggttctgtggcgatgccaaagaagccttggag
cagtacctcctgttggtgtacgtggggctgaccggctccgtcactatgatcacatgcaca
gtcctggctctcaccagactggtctttgagtacaaagactctatagacatggggtcgatg
gagcacctcctacacaacgtgtgcctgctgctgacgtctcacaccagggagattgtcaaa
gcagcgctcagcttcgtcaaggtcatcctcttcatcatggaccccacgacactggccggc
cacgtcaccgtgatgatggagggtgttgggaacatcaaggatgacgttaggagacacttc
aggacgaagctgaaaaacattttcaccaagttcatcaggaagtttgggtttgagttggtg
aaaagcaagctgcccgtggagcatcataaggtgttggtgaacatccgtaaggctgaggcc
agaaccaagagatcaagactggccgacgaagaccacgacgactcagacagcggagacgac
acgccaaaagccagaggagagagtatcgaggagatcttggccgattcagactctgacatg
tcagatgacgaaaggcctaagggcgctaagacccagaggaagcccacaaagcagaagggg
cgggcctggctgaaggagggacatggagacgacccactcaacttcctggatcccactgtc
tcccagagggtcttggccaccaacccaaacatgaagaaaagggcaaaagttcagcacagc
ttcaaggtcacgtcagacggaagactcatcatcaaagaggacaatgacgagggagtcaag
actaaagatgatgagggagagatgaaagacattctggaggaggctggagtcaagagtata
aagactaagaagaggagattccaggatggtcactacgatgacgacatggagatcgaaccc
cagctgaaatacaaagctggcggctcggggatccacagaccgctgggtgggagccgagac
ctggggggagactacaaggccaagaagggtaaaggagacgtgaagaggaaaggaaaggtt
gagccgtatgcctacatcccgatgaggaaagcacagctcaatcgcaggaagaaagcaaag
atgcagggacagttcaagggcatggtgagaggggccaagaagggagcgcagtctgggaag
aagatgcaaaggaacaagaggagggcctga
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