Salvelinus fontinalis (brook trout): 129836112
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Entry
129836112 CDS
T11136
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129836112 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129836112 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129836112 (pdlim1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Ehrlichia_rpt
Motif
Other DBs
NCBI-GeneID:
129836112
NCBI-ProteinID:
XP_055757886
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All DBs
Position
37:complement(10472534..10483893)
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AA seq
310 aa
AA seq
DB search
MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRITPGSKAAQANLNVGDQLLAIDGEPTESM
THLQAQNKIKGCVEEMILSIDRSETKIWSPLSSEDGKTNPYKMNLASEPQEVKPIGSAHN
RSALPFAGFGPNVVTNQYNNPAGLYSSENIKDFNTAVDDVKTIATAANEPSNIPTVADSE
VYKMLQENQEADEPPRQSASFKVLQEILESDPDKPSGFRSVKAPAAKMGSTVGNANKLPI
CDKCGSGIVGMVVKLRDKFRHPECYTCSNCDVNLKQKGHFFVEDQIYCEKHARERVTPPE
GYDVVTVFPK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctctacgggttgtagtgcaaggtcctggaccttggggattccgtctagttggtggg
aaggattttgaacaacccttgactatctcgcggatcactcctggcagtaaggctgcccag
gccaatctgaatgtcggggatcagctcctggccattgatggagagcccactgagagcatg
actcacctgcaggcacagaacaagatcaagggctgcgtagaggaaatgatcctctctatc
gacagatcagaaactaaaatctggtcaccgctctcttctgaggatggaaagaccaaccct
tacaagatgaatcttgcgtctgagccgcaggaggtgaaacccataggttccgcccataac
aggagcgccctgccatttgctgggtttggccccaacgtggtaaccaatcagtacaacaac
cccgccggtctctactcctccgagaacatcaaggactttaacacggccgtggatgacgtg
aaaaccattgccactgctgctaacgagcccagcaacatcccaacagtggcagactcggag
gtctacaaaatgctgcaggaaaaccaagaggctgatgagcctccccgacagtccgcttca
ttcaaggtgctgcaggagattctggagtcagatcctgataagccctctgggtttaggagt
gtgaaggcacccgctgcaaaaatgggctcaacagtgggaaatgcaaacaagttaccaatc
tgtgacaaatgtgggtcagggattgtagggatggttgtcaagttgcgggacaagtttcgt
caccccgagtgctacacctgctccaattgtgacgtcaacctgaaacagaagggacacttc
ttcgtggaggaccagatctactgcgagaagcacgcacgcgagcgagtgactccacccgaa
ggctatgacgtggtcacagtcttccccaagtag
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