Salvelinus fontinalis (brook trout): 129836243
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Entry
129836243 CDS
T11136
Symbol
psda
Name
(RefSeq) uncharacterized protein psda isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129836243 (psda)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129836243 (psda)
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
129836243 (psda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
129836243
NCBI-ProteinID:
XP_055758111
LinkDB
All DBs
Position
37:16234179..16281642
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AA seq
1695 aa
AA seq
DB search
MSQSGKILHLYVEVRSVPEEEEERKELGGGVEGIHPLVLQEPDILPQSQRTSSHSTCTCT
STPSQTSMSPGVVHNVGGSSPSLTPSKSSSRHSVSFQLDLPDNTGQHHRQSLPYEGTGQL
LSTLQPAPNGPQHGTLVRTRSSDIEHYHGRVPLSPASSGIITAPSPPTSGCRFYNSSGVG
DEGKRSVVSFSYIEKASIKSVDSPCSALCQSIPENPFSRGMEERYLPAHLRKRLSDPVWS
DSWQPSGSSSPKLSPKGSPCLRRATLDTVAREATYRAMEEFGSPELRRRLAAYSPDQSHS
FPPHYQQQLRCKSWVGSPVLPQGTKTLPVNPHLIDPDRNHGLNGLTRSPASDQLFVQARQ
SYYKYTMSPSSVRHHYGVHNHRPGLGDESPSLSSKFRPPLPTGRPTAIQHDIPASMSTST
SASCNQRTSSQTSSHTPSDSHCLPNKVNSKPSDQSNGSKLGEGLNQTSGSRSIFQASSPD
MARKLAAEVTKLPNILMDRRTPSPTPFQADSAKSESPRPGYLSRKSQPYTTLQGTGSPAQ
PHPEANSNTHLQDHRWTEKESPSVGCHSRESRPGQGSGQSSPLLRQKGISSPTMPAMLHP
VVASSHTPIIDPRLQRAELVAKDSPTLHRHQPPQYMGDRGSPGLYRRQYDTLFDRGGPRD
SPESSRRLVIGLDMEPPDSWTSRMQQWRENVSVTDQDESNREDPTADGDGLCVLTKEELM
QQGRDEGAVLGDKQGVNRGETQDHSGLLGSSQSSSGVTGSLEENSQQERDCLSPETSSQS
SQKSNDTASGMQSDSHSSVLGPSLHSQRIAHAKWEFLFGQPTEDCHDSKDSTAPPRGTSS
ESPKPTPPSSLPLKPTNHWRGLDDEEQSLSYHNVQQVEVELVTPPLVAVVGISPKTGIIR
KTIKYSETDLDAVPLKCYRETDLDEVMLAEAEAQAEREREQEEVEVDSAFGSNRSVLGTS
ASSASTIVHTDGEVEELEEEVVSWASVRMQGDKKRQHATHEDNQTYSLLMKGRPLDYISD
SHSALKSPISLTSPRRISADGLDSFSHHFESIVESHRAKGTSYSSLDSVDLLTSSGPPVF
TFDLPTLTPEIQSQICESARHITELSFAPLAHPEPPRVSVPVRSENTLAPTGDGLSSYSE
DSTSGGKSRLEKDSMKTKSNLDFPLIREKPGHRAPDPFPQQDVGEHLVLGSTESLANGNK
ADLQAAKRLAKRLFNLDGFRKSDVARHLSKNNEFSRMVAEEYLSYFNFSGLTIDQAIRAF
LREFALMGETQERERVLAHFSRRYLQCNPNAIPSEDSVHTLTCALMLLNTDLHGHNIGKK
MSILQFISNLEGLNDGKDFPRELLKALYNSIRNEKLQWTIDEEELRKSFSELADLRTDSA
SHTMKRIGSGLGVAQNPDALIYKNGFLVRKVHADSDGKKTPRGKRGWKTFYVMLKGLVLY
LQKGEYRPEKQLSEEDLKNAVSIHHSLAMRAADYSKRPNVFYLRTADWRVFLFQAPNSEQ
MQSWITRINVVSAMFSAPPFPAAIGSQKKFSRPLLPGSNSKLSQEEQVKSHETRFRAISS
ELIELTAVIPDKKAKVRDLEEHKQREEYLEFEKTRYGTYAMLLRSKIRSGEEDLSLFESR
LFDDGGLQRAHSSPTLREEHSSSSQASSTRGGGSSSSQASSAKGGASSSSSSTRGSSKTK
RSEPQRHSYRQAVKQ
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtctggcaagatcttgcacctgtatgtggaggtgaggtctgtcccggaggag
gaggaagaaaggaaggagttggggggtggtgtggaggggattcacccactagtgctccaa
gagccggacatcctacctcagtcccagcgcacctccagccactccacctgtacctgcacc
tccacccccagccaaacctccatgtccccaggagtggtgcataatgttgggggcagcagt
cccagcctcaccccctccaagtcctcctctagacactctgtcagtttccagctggaccta
ccggacaacaccggacaacaccataggcagagtctgccttacgaggggactggtcaactg
ctctccactctccagcctgcacccaacgggccgcagcatggaactctggtgcgcacccgc
tcctcagacattgagcactaccacgggagggtgcccctatcccctgcctcctctgggata
ataactgccccctcccctccaaccagtgggtgcaggttctacaatagctctggtgtgggg
gatgagggcaagcgctctgtggtcagctttagctacatagagaaagccagcattaagtct
gtggacagcccctgcagtgctttgtgtcaaagtatacctgagaaccccttcagtagagga
atggaggagaggtatctgcctgcccacctcaggaagaggcttagtgaccctgtgtggtcg
gacagctggcagccctccggtagctccagccccaaactgtcccccaagggctccccctgt
ctccgcagggccactctggacactgtagccagagaagccacctacagggccatggaggaa
tttggctccccggaactgaggcgcagactggcagcctacagcccagaccagagccacagc
tttcccccgcactaccagcagcagctccgctgcaagtcctgggttgggtccccagtcctg
cctcagggtaccaaaacactgcccgtcaatccacacctcatagacccagacaggaaccac
ggtttaaatggcctcaccagaagcccagcttctgaccagctcttcgttcaagccaggcag
tcctactataaatacaccatgtccccctccagtgttcgccaccactatggtgtccataac
cacaggccaggcctgggggacgagagccccagcttgtcctccaagttccgcccgccttta
cctacagggaggcccactgcaatccagcatgacataccagcaagcatgtctaccagcacc
tcagcctcttgcaaccagaggactagcagccaaaccagcagccacactcctagcgatagc
cactgcttacccaacaaggtcaactccaaaccgtcagatcagtcaaatggcagcaagctg
ggagagggattgaaccagaccagtggcagcagaagtatcttccaggcctctagccctgac
atggcccgtaagctggcagcggaggttaccaagcttcccaacatcctcatggacaggagg
actccctcccccaccccgttccaggctgactcggctaagtcagagagccccaggcctggc
tacctctctaggaagtctcaaccctataccaccctccagggcacgggttctccagcgcag
ccccaccctgaagctaacagtaacacccacctccaggaccacaggtggacagaaaaggag
tctcctagtgttggatgccactccagagagtccagaccaggccaaggctcggggcaatcc
tcccccctcctacggcagaaaggcatctcctcccctactatgccagctatgctgcaccca
gtggtggcgtcgtcccacactcctatcatagaccctcggctgcagagagctgagctggtg
gcgaaagacagccccaccctgcaccgccatcaacccccacagtacatgggagaccggggc
tcccctggcctgtataggagacagtacgacaccctctttgacagaggtggtccaagggac
agcccggagagcagcaggcgcctggttataggccttgacatggagccaccagacagctgg
acctccaggatgcagcagtggagggagaacgtgtccgtcacggaccaagatgagtccaat
agggaggatccgactgctgatggtgatggattgtgtgtgttgaccaaggaagagctgatg
caacaggggagggatgaaggagctgtgttgggggataaacaaggggtaaacaggggggag
acccaggaccatagcggattgctggggtcttcccaaagctccagtggagtgacaggcagt
ctggaggaaaacagtcagcaagagagggactgtctctctccagagacatccagccagtcc
agccagaagagcaatgacactgcttctgggatgcagtcggacagccactcctctgtgctg
ggcccgtccttgcactcccagaggattgcccatgccaaatgggagttcctattcggacag
cccacagaggactgccacgattctaaagactctacagcccctcctaggggcacctccagc
gagtctcccaagcctacccctccctcctccctgcccctgaagcccacaaatcactggagg
gggctggatgatgaggaacagagtttatcctatcacaatgtccagcaggtggaggtggag
ctggtgactccacccttagtcgctgtggttggcatctcacccaagacgggcatcatccgg
aaaaccatcaagtactctgagacggacttagatgcggtgcctctgaaatgctatagggaa
acagatctggatgaggtaatgttagctgaggctgaggcccaggcagagagagagagagaa
caggaggaggtggaagtggactctgcctttgggagtaatcgcagcgtgctgggcacctcg
gcctccagcgccagcaccatagtccacactgacggagaggtggaggagctggaggaggag
gtggtgagctgggccagtgtgaggatgcagggggataagaagagacaacatgccacccat
gaggataatcagacgtacagtctgctaatgaagggtcgtcctttggactacatatcggat
tcccattcagcactcaagtcccccatctcattgaccagccctcgcaggatctctgcggat
ggcctggactccttcagccaccactttgagagcattgtggagtctcaccgggctaagggc
acctcctacagcagcctggacagcgttgaccttttgacctccagcggcccgcccgttttc
acctttgaccttccaaccctcacccctgagatccagagccagatttgtgagagtgcgcgt
cacatcacggagctgagttttgcccccctggcccatccagagcctcccagggtgtctgtc
cctgtccggtctgagaacaccctggcccccacaggagacgggctcagcagctactctgag
gattctacttcaggagggaagtcccggttggagaaagactcaatgaaaactaagtctaac
ttagactttcctctcattagggagaagccaggccaccgggctccagacccgttcccacag
caggacgtgggcgagcacttggtcctgggcagcacagagtccctggccaacggaaacaag
gctgacctgcaggctgccaagcgcctggccaaacgcctgttcaacctggatggcttcagg
aagtctgacgtggccaggcacctgagcaagaataatgagtttagtcggatggtggcagag
gaatatctcagttacttcaacttctcaggccttactattgaccaggcaatacgagccttc
ctgagggagtttgccctcatgggagagacacaagagagggagcgagtgctggcccacttc
tctaggagatatctacaatgcaaccccaatgcaataccttctgaagacagtgtccacact
ctgacctgtgccctgatgctgctcaatacagacctgcatggccacaatattggcaaaaag
atgtccattctgcagttcatcagcaacttggaaggactaaatgatggaaaagattttcct
agagaactgctcaaggccttgtacaactccatcagaaacgagaagctccagtggaccatc
gatgaggaggagttgcgcaagtccttttcagagttggccgatttgcgcactgactccgcc
tctcacaccatgaagcgaattggcagtggtctaggcgtggcccagaatcctgacgccctg
atctataagaatggcttcctggtgcggaaggtccatgcagactctgacggcaagaaaacc
cctcgaggtaagagaggatggaagacgttttatgtcatgctgaagggattggtcctttac
ctgcagaagggagagtaccgtccagagaagcagctgtctgaagaggatctgaagaacgct
gtgtccatccaccactctctggccatgagggcagcagactacagcaagaggcccaacgtg
ttctacctgcgcactgcagactggagagtgttcctcttccaagcacctaattcagagcag
atgcagtcgtggatcacccgtatcaacgtggtctcagccatgttctcagcgccacccttc
cctgctgccatcggctcccagaagaaattcagccgcccgctgctgccgggctccaacagc
aaactgtctcaggaggaacaagtgaaatcccatgagacacgtttccgggccatctcctct
gagctgatcgagctaactgctgtgattccagacaaaaaggccaaagttcgtgatctggag
gagcacaagcaacgtgaggagtacctggagtttgagaaaactcgctatgggacgtacgca
atgctactgaggtctaagatccggagtggggaagaggacctgtctctgttcgagtcgcgc
ctctttgacgatgggggtctccagagggcccactccagccccactctgcgggaggagcac
agcagcagcagccaggccagcagtactagggggggtggaagcagcagcagccaggccagc
agtgccaaggggggggccagcagcagtagttccagcaccagggggagcagcaagaccaag
cgctccgagccccagagacacagctacagacaggctgtcaaacagtga
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