Salvelinus fontinalis (brook trout): 129836540
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Entry
129836540 CDS
T11136
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
129836540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129836540
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
129836540
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GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
129836540
NCBI-ProteinID:
XP_055758845
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Position
37:32519816..32880979
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AA seq
1262 aa
AA seq
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MLAEADATVPHGSGNSMMSRNNYFNKNPDASISMSKMDVIIPFSPDVPCDNNGQRMWWAF
LASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKKKDAQKVNNPANSQAADGTAKGPDEK
DEVVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMFFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIM
RVISIKNYSPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELCYVKLK
LLLIAIENKSELGESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDD
ITDPKRIKKCGCKRPEGATTPGKTGSQKETGVRFKADCNLVEDEHPSTLSPKKKQRNGGM
RNSPNNSPNMMSRHDPLLIPGNEQMENMDMNLKQYDSTGMFHWCPSKEIEKVILTRSEAS
MTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIVFVGSLEYLRREWETLH
NFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQ
FDDSIGLLQANSQGFTPPGMDRSSPDSSPVHGLARQASVTTGANIPIITELAKPGKILPL
VSFSQEKKLGINIQMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSL
MSATYFNDNILTLIRTLVTGGATPELEALLAEENALQGGYSTPQTLANRDRCRVAQLALY
DGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLATPSQCTKRYVITNPPYEFEL
VPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPTTNRQNRSSKAREAGH
KQNATRMNRMSQEKKWFTDEPENAYPRNIQIKPRSTHMANQVNQYKSTSSLIPPIREVED
EC
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaggcggacgccaccgttccccatggaagcggcaactctatgatgagtaga
aataactattttaacaaaaatccggacgcctcgatctcgatgtccaagatggacgtgatc
atccccttctcgccagacgtgccctgcgacaacaatggccagcgcatgtggtgggcattc
ctcgcctcctccatggtcacgtttttcggaggtctcttcatcattctcctgtggaggacc
ctcaaatacctgtggaccgtctgctgccactgtaacatcaaaaagaaggatgcccagaag
gtaaataaccctgctaacagtcaggcagcagacggaacagctaagggtcctgatgagaag
gacgaagtggtccctgccagcgaggtgggctggatgacctccgtgaaggactgggccggg
gtcatgatatcagcacagacactcaccggcagagtcctggttgtgctagttttcgctctc
agcattggagcacttggaatatactttatagattcttctgatcccatagaatcctgtcag
aatttctacaaagatttcacgttacagatcgacatgttcttcaatgtcttcttcctcctc
tactttggcttgcggttcatagcagccaatgataagctgtggttctggctggaggtcaac
tcagttgtggacttcttcactgttcctcctgtcttcgtatctgtctacttgaacaggagc
tggctgggcttaagattcctgagagccttgagattgatacagttctctgaaattttacag
tttttgaatatcttaaaaacaagcaattccatcaagctggtgaacctgtgttccatcttc
ataagcacatggctaacagctgccggattcatacatttggtggaaaactcaggggatcct
tgggaaaacttccaaaattcccagtcactttcctattgggaatgtgtctacttgctcatg
gtcactatgtcaacagtgggctacggggatgtctatgcaaaaaccaccctgggacgcctg
ttcatggtcttcttcatcctcgggggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtttgtggtcatattacgctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacggcactttacccaggtagagttctaccag
ggatctgttctcaaccctcacgatctggccagagtgaagattgagtcagcagacgcctgt
ctgattctggctaataagtactgtccagatcccgatgctgaagacgcctccaacatcatg
agggtcatctctatcaagaactattcccccaagatacgaattatcactcagatgttacaa
taccataacaaggctcacctgctcaacattcctagctggaactggaaggagggggatgat
gcgatctgtctagcagagctgaaggctggcttcatagctcagagctgtctggcccagggc
ctctccaccatgctggccaacctcttctccatgaggtccttcatcgagattgaagaggac
acatggcagaagtactatttagaaggggtagctaatgagatgtacacagagtatctgtcc
agtgcctttgtggggctctccttcccagcagtctgcgagctgtgctacgtgaagctgaag
ctgctgcttatcgccatcgagaacaaatcggagctgggagagagcagaagcagaaagcgc
atcctcatcaacccggggaaccacgtaaagatgcaggaaggaactctggggttcttcatc
gccagtgacgccaaagaagtaaagagagcatttttctactgcaaagcttgtcacgatgac
atcacagaccccaaacggatcaaaaagtgtggctgcaaacgaccagagggcgctacaaca
ccaggaaaaacgggaagtcaaaaagagaccggcgttcggttcaaagcagattgcaattta
gttgaagacgagcacccgtcaactctgtcacccaaaaaaaagcagcggaacggaggcatg
cgaaactcacccaacaactcccccaacatgatgagcaggcatgatcctctactaatccct
gggaacgagcagatggagaacatggacatgaacttgaagcagtatgactccacaggaatg
ttccactggtgtccgtctaaagagatcgagaaggtcatcctgacccggagtgaggcatcc
atgacggtgttgagcggccatgtagtggtctgtatatttggagatgtcacgtccgctcta
gtggggctgcgaaacttggtgatgcctttgagagccagcaacttccattatcacgagctg
aaacctatagtgtttgtgggctcgctggagtacctgaggagagagtgggaaaccctacac
aacttccccaaggtctccatactacctggtacgccattaagccgtgcagatttaagggct
gtcaacatcaacctctgcgacatgtgcgtgatactgtcggccaatcagaacaatatcgac
gacgcctcgctgcaggataaggaatgcattctggcgtcgctcaacatcaagtctatgcag
tttgacgacagcatcgggctcttgcaggctaactcccaaggtttcacgcctcctggaatg
gaccggtcctctccagacagcagtccagtacatggtttagcacgccaggcctccgtcacc
actggcgccaacatccccatcatcactgaactagctaaacctggcaaaatactgcctttg
gtttcattcagtcaggaaaaaaaacttggaatcaacatacaaatgataactgagctggtg
aacgactccaacgttcagttcttggaccaagatgatgacgatgacccggacacagagctc
tacctgacacagcccttcgcctgcggaaccgccttcgcggtcagcgtgctggactctctc
atgagtgcaacatacttcaacgataatatcctcaccctgatccggacgctggtgactggg
ggagccaccccagagctagaggctctactggctgaggagaacgccctgcaagggggctac
agcacgccacagacactggctaaccgagacaggtgtcgtgttgcccaactggccctgtac
gatgggccctttgccgacttgggggatggtggttgctatggagatttgttctgtaaagca
ttgaagacatacaacatgttgtgcttcggaatctacagattgagagacgctcaccttgcc
acacctagccagtgtaccaaacggtatgtgatcaccaaccctccgtatgagtttgagttg
gtccccacagacctgatcttctgtctgatgcagtttgaccacaacgcgggccagtctcgg
accagcctttcccacagctcccactcctcccattcctccagcaaaaagagctcgtccgtc
cactccatccccaccaccaaccggcagaaccgcagcagcaaggctcgggaggctggtcac
aaacagaatgcaacaaggatgaatagaatgagccaagaaaagaaatggtttacagatgaa
ccagaaaatgcctacccacggaacattcagatcaagcccaggagcactcacatggccaac
caagtcaaccaatacaaatccactagcagtctgataccaccaatcagagaagttgaagat
gaatgttga
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