Salvelinus fontinalis (brook trout): 129836675
Help
Entry
129836675 CDS
T11136
Name
(RefSeq) rhomboid-related protein 3-like
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfon01002
]
129836675
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
129836675
Peptidases and inhibitors [BR:
sfon01002
]
Serine peptidases
Family S54: Rhomboid family
129836675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_5
EF-hand_11
EF-hand_9
AIF-1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
129836675
NCBI-ProteinID:
XP_055758888
LinkDB
All DBs
Position
3:complement(6002140..6052762)
Genome browser
AA seq
408 aa
AA seq
DB search
MPDASRDVPVHSSPAVAANAEGDEIEVLESIDVLPVAPEDQWKSLFDKFDSESSGFISTE
RFRDLLAAHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSNSFRRAILQGSRQ
LKGAGALGEEVGLGLSQRLVRHIAYETLPREIDRKWYFDSYTCCPPPWLILAITIAEVAV
FMYYGLQLDRWVLQVSSPHFLRGPLPYHPQLRIQAWRYLSYAFMHAGIEHLGLNMAMQLL
VGVPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNW
SGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVMVGLTLGVV
VLQNYEQRLQEQSLFWIFFSVYLLFVLCAVFWNVFAYSLLDVRLPPTL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgtctcgggacgtgccggtgcattcctctccagcagtggcggcgaacgct
gagggagacgagatagaagtgctggagagtatcgatgttcttcccgtggccccagaggac
caatggaaatctctgttcgacaagttcgactcagagagttcaggattcatcagtacagag
cggttcagggacctgctggcggcccacggctcggagctggaccctcacaagctggaggtt
ctactggccctcgccgacggcaacgcagacggaaagatctgctaccaggactttgtcaac
ctgatgtccaacaagcgcagcaacagcttccggcgggccatcctccagggaagtcgtcag
ttgaaaggggccggggccctgggggaggaggtgggtctgggtttgtcccagaggctggtg
aggcacatcgcctacgagaccctgccccgggagatcgacaggaagtggtacttcgacagc
tacacctgctgcccaccaccctggctcatcctggctatcaccatcgctgaggtggcagtg
ttcatgtactatggcctgcagttggaccgctgggtgctgcaggtgtccagtccccacttc
ctgaggggcccactgccataccacccccagctacggattcaggcctggagatacctcagc
tacgccttcatgcacgcagggatagaacacctgggtctgaacatggccatgcagctgctg
gtgggagtccctcttgagatggtccatggagcgctgaggataggactggtctacgtgtgt
ggtgtactggcaggctcccttgccgtctctgtcactgatatgactgctccggtggtgggg
tcgtcaggaggagtctacgccctggtctcagcacacctggccaacgtcgtcatgaactgg
tcgggtatgaaatgtcagtttaagctgtttcggatggccatggctctggtctgcatgagt
gtggagtttggccgtgccgtgtggctgcggttctacccgccggccttcccgccctgcccc
aaccccagctttgtggcccacctggggggtgtgatggtggggctcaccctgggggttgta
gtcctccagaactacgagcagcgtctccaagagcagtctctattctggatttttttctct
gtctacttactctttgtcctctgtgctgtcttctggaacgtcttcgcctacagcctgctg
gacgtccggctcccccccacgctgtga
DBGET
integrated database retrieval system
