Salvelinus fontinalis (brook trout): 129837172
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Entry
129837172 CDS
T11136
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129837172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129837172
03036 Chromosome and associated proteins [BR:
sfon03036
]
129837172
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129837172
Coactivators
SAGA/TFTC/STAGA complex
129837172
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129837172
STAGA complex
129837172
TFTC complex
129837172
SAGA complex
129837172
SLIK complex
129837172
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Aladin
DSE1_N
ANAPC4_WD40
PAC11
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_WDR41
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
ASA1
Beta-prop_Vps41
Beta-prop_WDR19_1st
Tricorn_2nd
PEP5_VPS11_N
WD40_like
Beta-prop_WDR75_2nd
PROPPIN
PD40
BCAS3_WD40
WD_LRWD1
Beta-prop_ELP1_1st
Nbas_N
Motif
Other DBs
NCBI-GeneID:
129837172
NCBI-ProteinID:
XP_055759070
LinkDB
All DBs
Position
3:complement(6632689..6636781)
Genome browser
AA seq
607 aa
AA seq
DB search
MKRVRTEQIQYTVAQYLKRRQYVDTESSLKGAKLSQSAEEMAANLTVQTESGCANIVSAA
PCQADPQQYETQFSRLRNFLSEAVLPWGQEVSCILYPLFVYLHLDMVRCSLKGAVDGFYS
RFHSLFLGDAEQRSTVEQLRHVLTQQDVTANPKLLAFLDHKYVVNLTEPAYSYLLRYLQS
EDNSTLCRALSTHVQVEVTSSPRTDYQLYGTTGAGATGAATTAPNSTSSWSGADGPDRGE
AAGVEVPTGIPQSEAALEALQDCIKKVREGPPSLTTVCFYAFQHTEQLLNTAEVSADSKL
LAAGFDSSAVKLWSLRARKLKARPHRTDVSHIRLACDVLEEEADEEDGSGSEIKTLRGHS
GPVFRTAFLTDSSGLLSCSEDTSIRYWDLGSFTNTALYQGHAYPVWDVDVSPCSLYFASG
SHDRTARLWTFSRTYPLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVR
LFTGHRGPVLSVAFAPNGKYLASAGEDQRVKLWDLASGALVKDLRGHTDSVTSLSFSPDS
SLVASSSMDNSVRVWDIRNSHGTTHADGSSSELVGLYTGNTSNVLNVQFMACNLLLVTGT
AQEKHGQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggtacgcacggagcagatccagtacactgtagctcagtacctgaagcggagg
cagtatgtggacactgaaagttccctgaagggggctaaactgtcccagtccgcagaggag
atggctgccaacctcacagtgcagacagagtcggggtgtgcaaacattgtctctgctgcc
ccttgccaagctgaccctcaacagtacgagacccaattttccagacttcgcaattttctc
tcagaagcggtgttgccatggggccaggaggtgagctgcatcctgtacccgctcttcgtt
tacctccacttggacatggtgcgctgcagcctgaagggggcggtggatggcttctacagc
cgcttccacagcctcttcctgggggacgccgagcagcgctccaccgtggagcagcttcgc
catgtcctcacccagcaggatgtcaccgccaaccccaagctcctggccttcctcgaccac
aagtatgtggtgaacctgacagagccggcctacagttacttgttacgctacctgcagagc
gaagacaacagtactctctgcagggccctcagcacccacgtccaggtagaggtcacctcc
tcaccacgcactgactaccagctgtacgggacgacgggtgcgggagctaccggggccgcc
accacggcccccaactctacctcctcgtggtcgggcgcggatggccctgaccgaggagag
gcggcgggggtggaggtccccacagggatcccgcagagcgaggcggccctggaggcactg
caggactgcattaagaaggtacgtgaggggccgccgtcactcacaaccgtgtgcttctac
gccttccagcacacggagcagctactgaacacggcagaggtgtcggccgacagcaagctg
ctggccgccgggttcgacagctcggccgtcaagctatggagtcttagggccaggaaactg
aaggccaggccacaccggaccgacgtgtcacacatccgactagcatgcgacgtgctggaa
gaggaggcagatgaagaggacggctcgggcagcgagatcaagaccctgcgtggccacagc
ggtccggtgttccgcacagccttccttacagatagctcgggcctgctatcctgctcggag
gacacgtccattcgctactgggacctgggcagcttcaccaacacggccctctaccagggc
cacgcctaccccgtctgggacgtggacgtcagcccctgcagcctctactttgccagcggc
tcccacgaccgcaccgcccgcctctggaccttctccaggacctaccccctgaggctctac
gccggccacctagcggacgtggactgcgtcaagttccaccccaactcaaactacctggcc
acaggctcaacggataaaaccgtccgcctctggagtacccagcagggggcgtcagtgcgc
ctgttcacaggccaccgcggccccgtgttgtccgtagcctttgcgcccaatgggaagtac
ctggcgtcggcgggcgaggaccaacgggtgaagctgtgggacttggcctcaggggctctg
gtcaaggacctgaggggccacacggacagtgtcaccagcctgtcgttcagccccgacagc
agcctggtggcctcctcttccatggacaactcagtcagggtgtgggacatccgaaactcc
cacgggacgacccacgcggatggctcgtccagcgagctggtggggctctacacaggcaac
accagcaacgtgctcaacgtccagttcatggcctgtaacttgcttctggtgacgggaaca
gcgcaggagaaacatggacagtag
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