Salvelinus fontinalis (brook trout): 129837476
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Entry
129837476 CDS
T11136
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04514
Cell adhesion molecules
sfon04810
Regulation of actin cytoskeleton
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129837476
04514 Cell adhesion molecules
129837476
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129837476
09142 Cell motility
04820 Cytoskeleton in muscle cells
129837476
04810 Regulation of actin cytoskeleton
129837476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129837476
Cell adhesion molecules [BR:
sfon04515
]
Integrins
Integrin alpha subunits
129837476
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
129837476
NCBI-ProteinID:
XP_055759645
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Position
38:19472980..19543395
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AA seq
1056 aa
AA seq
DB search
MCAYRMCAFGGMLCRVVSVLWLVLSVVLGFNLHAERPAVYGGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPPNPDPTKLPYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKVNGEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVPGEKHTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTARGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRIINPDDRSCLLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGVRGGVKRVHFLNSHQPQHTGFLTLGHSRPHSCLNYTVYLREEDEFRDKLTP
ISLALNYSLAPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNECIPDLQLSASMDRTEL
VVGDDNLVMLTINAVNNGEGAYETELHTLLPPEADYIGVERRIESLSRLNCEYRMVNDSR
LVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNEDNSKSNPVSLSLSIS
ARAQLDLRGVCHPSQVVLPFPHWEPKEKPVKEDDVGPQVTHIYELHNSGPSSIREAELQV
GWPSRFRDEHLLYALEVLTEGPISCRSNTSLNPLGLQMSSVQDTPELLGFLRNSSSPHRY
RRATTAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYL
LNSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAVPLWVIILAILLGLLVLA
MLTLAMWKCGFFDRARLPADDVSDREQLTSDQLADA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcctataggatgtgcgcgttcggtgggatgttgtgtcgcgtggtgtcggtgctg
tggctggtcctttccgtggtcttggggttcaacctgcatgcggagcgcccggccgtgtac
ggaggaccagaggggagctactttggttactccgtggacttctatcgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacgtcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccccaaaccctgaccccaccaagcta
ccctacagctgcacacagatacctttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggcaaagtggtggcctgtgctcctctctaccactggcgtactgtgaaggtgaac
ggtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggcggacctggcagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagccgtgctcaggagagtccctggagagaaacacacacacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggggttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggctgttactgacctcaatggagatgggtatgatgatgtactggtaggagcc
cctctctatatggagagagagagggagagtaagcccaaggaggtgggccgtgtctatctg
tacctccagcactccccgctcaccttctccgagcccctcctcctgacgggaacacacacc
ttcggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaac
gacgtggcagtgggttgtccgtttggaggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tgggcctccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacagggctcgtcctgtagtatcagtggaggctgagatgatcctgactcctagaatcata
aaccctgacgaccgatcctgcctcctgacagaatctgataccatggtaacatgtctcagg
gtagatatttgtgcgaaggtgagcggtgtggggatcccagactctgtagtcttgaatgca
gagctgcaactggattggctgaaaggtgtgaggggcggagtaaagagagttcatttcctg
aattcccatcagccccagcacacagggttcctaactcttggccacagccgtccacactcc
tgcctgaactacactgtctacctacgagaggaggatgagtttagggataaattgactccc
atttcattggctctgaactacagtttagcccctccttccaacctggatctcccccctgtc
ctcaaccgctacagcagtaccttcctgcaagaacaggcgtatattctgctggactgtggg
gaagacaacgagtgtattccagacctccagctgtctgcaagcatggaccgtacagagctg
gtggtcggggatgacaacctggtcatgttgaccataaacgcggttaacaacggagagggg
gcatatgagacggagctacacacactcctaccccctgaggctgattacataggagtggaa
cgcaggatagagtctctatccaggttgaactgtgagtacaggatggtgaatgactccaga
ctggtggtgtgtgacctggggaatcctatggttgctggaacagaagtatctgtaggttta
aggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatc
cacagttcaaacgaagacaactccaagagcaacccagtcagcctgtctctctccatctct
gccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgttt
cctcactgggagcccaaagagaagccggtcaaagaggatgacgtaggaccccaggtcaca
cacatctacgagctccataactcaggtcccagtagtatcagggaggcggagctccaggtg
ggctggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctaacggaa
ggaccaatcagctgccggagcaacaccagcctcaaccccctgggcctacagatgtcctct
gtccaggacactccagaattgttgggctttctgagaaacagtagctctcctcaccgctac
agacgagccaccaccgctgcccagccctacagcagcaagaccctgaactgcagtaacatc
atttgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtc
aagatccgctcccgactctgggctcacaccttcctccagagacgtaacgacccatacctc
ctcaactctaccgtgtccttcagagtgacggccctgccctaccgcctccagccctcctcc
ttaccccaacacaccacttcaatgggtacactggtgctgtgggggactcctgatgtggcg
tttgctgttcctctgtgggtcatcatattggccatcctactgggactgctggtcctggcc
atgctaacactggccatgtggaagtgtgggttctttgaccgggcacggctgccagcggat
gacgtgtcagaccgtgagcagctgacctctgaccaattagcagacgcctaa
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