Salvelinus fontinalis (brook trout): 129837520
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Entry
129837520 CDS
T11136
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129837520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129837520
03021 Transcription machinery [BR:
sfon03021
]
129837520
03036 Chromosome and associated proteins [BR:
sfon03036
]
129837520
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
ARID
129837520
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129837520
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129837520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
129837520
NCBI-ProteinID:
XP_055759734
LinkDB
All DBs
Position
38:complement(34866056..34887470)
Genome browser
AA seq
2351 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDRDPNEDSILGEKQQENKQPGLERGSPGRGDLQDGADV
GNAGGGGEPEMKNGNGNPSRTNNNQNDSIGSEGNNHPGMVHHHGSGFPPPSYGYSQHYGR
APFHQHGGQQSPGMAAAAGPAVPSSNMMDPYQPNSHDHGFSNHQFNNYNPFPNRTPHSGQ
GYGMNPSRNTQAPAAGGQPANVKQQPAGGPTAMAASYNNQRYNMGNPQPTSTPTLNQLLT
SPSSTRIYPNYPSSEYSNQEGASKGPTDTGSSGQYGGGNPGWQQRTHHPPPMSPGSTGQP
LGRSQPPGAMDPMAKMRGQTYGGGSPYSQQPGQGPPPGAQQGHAYPGQGYGPLGSQRYPV
VMQGRTPGAMGGMQYGQQMSSYGQQGPGGYGPQGQGPYYGQQGQALHPGQQQGPYPQAPL
GQQGGQTPYPQQSHPPQTSASHAQGGPPYPQPHMPPQSQGPQPGPSQGPPQSQPPYSQGP
AQAQAQSGQPPYPQQQGPPSQPPQQASSQVPAGSQPQLSYPPTQGPQQPPTQQPQTPSQP
PQQPPGHSQHPQGQPASYSQNPPQQQQQSQQSPYQRFPPPPQQEISQDSFSSQSSAPPSN
QPKSVSEDVSMQGQPSSLPVSPHPTCAKDLSGSIDDLPTGTDGALSPGVSTSGVSSSQGE
QSNLAQSPFSPHTSPHLPGIRGPSPSPAGSPASATTSRTGPLSPATMPGTQMPPRPSSVQ
SDGSLHPAMSQSPMAQERGFIQRNPQMPPYGSPQSASPLSPRQSSGGQMHPGMGPYQQQN
NSMVGYGPQGGQYGPQGYPRQPGYNNMPNANYPGPGMGNPMNPGPGMGNPINPMSGQGGL
PYAGIPPGRMPAGQMGVRPYGPNMGPNMPPNMGNMPPQVGSGMCPPPGLNRKAQEAAAVV
MQHAATNSIHSRMPGYPNMSPGMMGSGAPYGPPMNNMPGMMNAQGGPPFPMGPNMANNSS
GLAPSPEFCMDGKLNQGQKMNNKVDGTPKAEPTKSKKSSSSTTTNEKITRLYELGPELER
KMWVDRYLGFIEEKAMGMTNLPAVGRKPLDLFRLYVSVKEIGGFAQVSVNKNKKWRELST
NLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPEIITDNKKANQAKVQPPSPAGSG
SLQGPQTPQSTSSSMAEGSDLKPPTPASTPHPTQMPPGARSNVALQDPFADGSDPAFPRR
NSMTPNSGYQSGMSTPEMPGRMGPGPYEGPGPNKDPFGAMRKVGEQFLPASQGPNSGMAE
QQQFTRGPPPGAMGNMSMAQRQQYGPGPYGQGYERRPEQGMGPEGSMGPGAPQPNLMPVN
SDTGMYSPNRYPPQQQPRNDSYGNQYPGHGTPPGGSYPNQQPGMYPQQQQVMALTHCNYK
RPVEGGYPPAKRHEGEMYSAPFSAGLQQQQQPQQQPGVASAPPAGQPEMYQPQYSSGSFT
GTDRRLPGPQGQFPFPFNRERMQAATGPNAQPSMPPQMMQPSPDGPPGGVWQGRGEMNYP
GNYPNRQGGPPGGPAQGPGHPGMNRGSEEMSSEQRMNHEGQWGPGQMGPRQPPYGPGGTG
PPMTRTLQSNYQSAQAMQNHIPQVSSPSPMPRGGPMESRTSPSKSPYIHSGIKMQKAGPP
VPASHIVPQSVQSPLIRRDMPFPPGSVEATHPILKPRRCLTTKDIGTPEAWRVMMSLKSG
LLAESTWALDTINILLYDDNSISTFNLNSLPGLLELVVEYFRRCLIEIFGILREYEVGDP
GQRTLLDPDALKRDWSCMEDEEPGVEEMKVEGEDDEDDDNEEEEEEVVVQCSKQPAGTTI
EGQAQVKQEDEQESCSERDTLKEKDAEDKEKSFSTFEQPSSSSDPPGLGPATPQERPKQA
SKFDKLPLKMVRKKDPFPAGRATQRGKVQEFDSGLLHWSAGGGDSTEHIQTHFERREEFL
VPRERVLVVPTAKRKRPEPEKVGDKDNATPTEKDKQKGGKDQRPSQPSSTEKASTTTDGK
EGKSEHSDAETEEMSQTEEPQSQQEHDKSSGPARQQVPQRVVEDEPHSKDEGPLVTLANW
QDALARRCVCVSNIVRSLSFVPGNDQEMSKHPGLMLLLGRLVLLHHRHPERKQAPLTYEK
EEESDDCLGQRDEWWWDCLSLLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVC
PSAEAQDPFPTLGPHSAMSPQRLVLETLSKLSIQDNNVDLVLATPPLGRLEKLYGTLVRL
VGERKVAVCREMSVVLLANLAQGDSMAARAIAVQKGSVGNLLGFLEDSLAATQLQQSQSS
LLHLQGMHFEPTSNDMMRRAARALHALAKVEENHSEFTLYESRLLDLSVSPLMNSVVSHV
ICDILFLIGQS
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactctcaacacaagtccgccttccgaactaaag
aaaccggatcgagacccaaatgaggattctatactgggggaaaagcagcaggaaaacaag
cagccgggattagagcgcggatctccgggccggggggatctgcaggacggggccgatgtt
ggaaatgcagggggaggaggggaacctgagatgaagaacgggaacgggaacccttccagg
actaataataatcagaatgattccatcggatccgaggggaataaccatcccgggatggta
caccaccatgggtccggttttcctccaccttcttatggatatagtcaacactacggccgg
gccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcaggtcca
gccgtgccgtcgagtaatatgatggacccatatcaacccaattcgcacgaccatggcttt
tctaatcaccagtttaacaattacaatccattcccgaacagaactccccattctggccaa
ggatacggcatgaacccctcacgtaatacccaggctccggcagctgggggacagccagct
aacgttaagcagcaaccagcaggaggacccacagcaatggctgcatcttacaacaaccag
agatataatatggggaatccacagccaacgtctaccccaactctcaaccagctactaact
tctccaagctccacgcgtatatatccaaattacccatctagcgaatatagtaatcaggaa
ggcgctagtaagggaccaacagacacgggcagtagcggtcagtatggaggggggaatccg
ggttggcaacaaaggacccatcatccgccgcctatgagccctggaagtacagggcaaccc
ctaggtagaagccagcccccaggtgcaatggatccgatggctaaaatgagaggccagacg
tacggagggggcagtccatactcccaacaacctggacaggggccacccccaggagcccag
cagggtcacgcatacccgggccaaggctacggtccccttggctcccagagatacccggtg
gtcatgcagggccgcacccctggggctatggggggcatgcagtacgggcagcagatgtcg
tcttatgggcagcagggaccaggaggctatgggcctcagggccaagggccctactacggc
caacagggccaggctttacacccaggccagcagcaagggccctacccacaggcacctctg
ggacagcagggtggtcagacaccctaccctcagcagtcccaccctccccagacgtcagcc
tcacatgcccagggtgggccgccctatccgcagccccacatgcccccccagtcccagggc
ccgcagccaggtccatcccaagggcccccgcagtctcagccgccctactcccagggccca
gcccaggctcaggcccagtctggtcagcctccttacccccagcagcaggggcctcccagc
cagcctccacagcaggctagctcccaggtcccagcagggtcgcagccccagcttagctat
ccacccacgcagggcccacagcagccccccacacagcaaccccagacaccctctcaaccc
cctcagcaaccaccaggtcacagccagcatccacagggccagcctgcatcctactcccag
aatcctccacaacagcaacagcagtcacagcagtcaccttaccaacgcttccctcctcca
ccacagcaggagatatcccaggactcgttcagttcccagtctagcgcccctccctccaac
cagcccaaaagtgtctcggaggacgtcagcatgcaaggccagccgtccagcctaccggtg
agtcctcacccaacctgtgcaaaggatctctcaggctccatcgatgacctgcccacgggc
acggatggcgctctgagtcctggcgtgagcacttcaggtgtgtcaagcagccagggcgag
cagagcaacctggcccagtcgcccttctcgccccacacctctccccacctgccaggcatc
cgagggccctcaccgtcacccgccggctcccccgccagtgccaccacctcccgcacgggg
cccctctcacccgccacaatgccagggacccagatgccccctagaccatcgagtgtacag
tctgatgggagtctgcaccccgccatgagccagtctccgatggcccaggagagagggttc
atacagagaaacccccagatgcccccatacggttcaccacagtctgcctctcccctgtca
ccccgacagtcctctggaggacagatgcaccctgggatgggaccttatcagcagcagaac
aactccatggtgggctatggacctcagggtgggcagtatggcccacaaggttacccccga
caacctggatacaacaacatgcccaatgccaactaccctggccctggcatgggcaacccc
atgaaccctggccctggcatgggcaaccccataaaccccatgtctgggcaaggggggctg
ccgtacgcaggcatcccccctggtagaatgcctgcgggccagatgggagtgcgtccctat
ggccctaacatggggcccaacatgccacccaatatgggtaacatgccacctcaggtgggc
tcagggatgtgccctccccccggtctcaaccggaaggcccaggaggctgcagctgtagtc
atgcaacacgctgctaccaactccatacacagcaggatgcctggctaccccaacatgtcc
cctggcatgatgggctctggcgccccctatggccctcccatgaacaacatgcctggcatg
atgaacgcgcagggcggcccgcctttccctatggggcccaacatggccaataactccagt
ggtttggcccccagtccagagttttgtatggatgggaaactgaatcagggccagaagatg
aacaacaaagtggacggaacaccgaaagcagaaccgactaaatccaagaagtcgagctct
tccacgacaaccaacgagaagatcacgcgtctgtatgagctgggccccgagctcgagagg
aagatgtgggtggaccgctacctgggctttatcgaggagaaagccatgggcatgaccaat
ctgcctgctgtgggccgcaagcccctagacctcttcagactctacgtctcggtcaaggag
attggaggcttcgcacaggtcagtgtgaacaagaacaagaagtggcgggagctgtccacc
aacctgaacgttggcacgtcgagcagcgctgccagctccctgaagaagcagtacatccag
tgtttgtacgcttttgagtgcaagatcgaacgcggggaggacccccctcctgagatcatc
actgacaacaagaaggccaaccaggccaaggtccagccaccctccccagccgggtcaggt
tctctccagggccctcagaccccccagtccacaagcagctccatggccgagggcagcgac
ctcaagccccccacacccgcctccaccccacaccccacccagatgccacccggggccagg
agcaatgtggcgctgcaggacccatttgctgacggtagtgaccctgctttccccagaagg
aactccatgacccctaactctggctaccagtctggcatgagtaccccagagatgccaggt
cgcatgggtccagggccctacgagggtccagggcctaacaaagacccctttggtgccatg
cggaaagttggggagcagttcttgcctgccagtcagggtcctaacagtgggatggctgag
cagcaacagtttactcgtgggcctcctccaggtgctatggggaacatgtcgatggctcag
agacaacagtacggaccaggaccttacggacaaggctacgaaaggaggccagagcagggg
atgggcccagagggcagcatgggacctggtgcaccgcagccaaacctgatgcccgtcaac
tccgacacggggatgtattcgccaaaccgctacccaccacagcagcagccacggaatgat
tcctatggtaatcaatatcctggccatggtactccccctggtggttcctatcccaatcaa
cagccaggaatgtacccacagcaacaacaggtgatggctctaacccactgtaactacaag
cgtcccgtggaagggggctacccaccagcgaagcgtcacgagggggaaatgtacagtgcg
cccttcagtgcaggtctgcagcagcagcaacaaccgcagcagcagccaggggtggcctct
gcaccccctgctggccagccagagatgtaccaaccccagtacagcagcggctccttcacc
ggcactgaccgccgcctacctggtccccagggccagttccccttccccttcaacagagag
cgcatgcaggctgccacggggcccaacgcccagccctccatgccccctcagatgatgcag
ccaagccctgatggacccccgggtggcgtgtggcagggccgcggggagatgaactatccc
ggcaactaccccaaccggcagggtggccccccagggggcccagcccagggacctggccac
cccggcatgaaccgcggttcagaggaaatgtcatcagagcagcgcatgaaccacgagggc
caatgggggccaggtcagatgggccctcggcagcccccctacggccctggagggacgggc
ccgcccatgacccgcaccctacagtccaactaccaatctgctcaggccatgcagaaccac
attccacaggtgtccagtccctcccccatgccccgcgggggccccatggagagccggacg
tcgcccagtaaatctccctacatacacagtggcatcaagatgcaaaaggcagggcccccg
gttcctgcctctcacatagtgccccagtctgtgcagtcccctctgatccgtagagacatg
ccctttcccccaggctcagtggaggccacccaccccatcctaaaaccacgccgatgcctc
acaacgaaagatatcgggaccccagaggcttggagggtgatgatgtccctaaagtctggc
ctgttggctgagagcacgtgggccctcgacaccatcaacatcctcctgtatgacgacaac
agcatctccaccttcaacctcaattcgctgcctggcctgctggagctggtggtggagtac
ttccggcgctgcctcatcgagatctttgggatcttgcgcgagtacgaggtgggcgatccc
ggccagaggactctactggaccctgacgccctaaaaagagactggagctgcatggaagat
gaggaaccaggggtggaggagatgaaggtagaaggagaggatgatgaggatgatgacaat
gaggaggaggaagaagaggtggtggtgcagtgttcaaaacagccggccgggacgacaatt
gagggacaggctcaggtgaagcaagaggatgagcaggagtcgtgctcagaacgggacact
ctgaaagagaaggatgctgaagataaggagaagagcttctctacctttgagcagcccagc
tcttcatcggacccccctggccttggcccggctaccccccaggagagacccaaacaggct
agcaagttcgacaagctccccctgaagatggtacggaagaaggacccgtttccggcaggc
agggcaacccagagaggaaaagtgcaggagtttgacagtgggctgctccactggagtgcc
ggcggtggagacagcacggaacacatccagacccactttgagaggagggaggaattcctg
gtcccacgagaacgagtgctggtcgtccccacagccaagaggaaaaggccagaaccagag
aaggtaggggacaaggacaatgctacccccacagagaaagacaagcagaagggggggaag
gatcagaggccctcccagccatcatccacagagaaggcctcaacaacaaccgacggtaag
gaggggaagtccgagcactcggacgctgagacagaggaaatgtcacagacggaagagccc
cagagccagcaggagcacgacaaatcgagcggacccgctcgtcagcaagtcccccagcgt
gtggtggaggacgagcctcacagcaaggacgagggcccactggttacactggccaactgg
caggatgctctggcccgccgctgtgtctgtgtctccaacatcgtgcgcagcctctccttc
gtgcctggcaacgaccaggagatgtccaaacaccctggcctcatgctgctgctgggtcgc
ctagtgctgctgcaccaccgccaccctgagaggaaacaggccccgctcacctacgagaag
gaggaggagtctgatgactgtcttggccagagggatgagtggtggtgggactgcctgtcg
ctgttgagggagaactgcctggtcactctggccaacatctctggccagctggacctctcc
atctaccccgagagcatctgccttcctctgctggacggcctcctccactgggctgtgtgc
ccctcggctgaggcccaagaccccttccccacgttggggccacacagcgcaatgtccccc
cagagactggtcttggagaccctcagcaagctgagcatccaagacaacaatgtggacctg
gtcctggccacgccgccgttgggtcggttagagaagctgtatgggaccttggtgcggctg
gttggggagagaaaggtggccgtctgcagggagatgtcggtggtgttgttggccaacctg
gcccagggagacagcatggcagcgcgcgccattgccgtgcagaagggaagcgtgggaaac
ctcctgggcttcttggaggacagcctggcagccacccagctacagcagagtcagagctct
ctgctgcacctgcaggggatgcacttcgagcccaccagtaatgacatgatgcggcgggcg
gcccgggccctgcacgccttagccaaggtggaggagaaccactcagagttcacactctac
gagtcacgcctcctcgacctctccgtatcacctctcatgaactcggtggtgtctcacgtc
atctgcgatatactttttctgattggccagtcatga
DBGET
integrated database retrieval system
