Salvelinus fontinalis (brook trout): 129837693
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Entry
129837693 CDS
T11136
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129837693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129837693
Spliceosome [BR:
sfon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
129837693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
DUF4011
Motif
Other DBs
NCBI-GeneID:
129837693
NCBI-ProteinID:
XP_055760037
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All DBs
Position
38:complement(5879913..5889539)
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AA seq
711 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDESAG
GFVERLFEALEESRNSRGNKGAGERNRKRDLKDVFGDEVEVGARRDVPEAGDGVPVKRKR
APRFEEVEEPEVLPAPPTESPGMLTKIQIKQMMEAATRQIEERKKQLSFVPVSSQQRLPL
PTPQPDPPFASRFLPAPSAPSSGSAQSIAPSQAATFMNDAIEKARKAAELQARIQSQLAM
KPGILGAIGSTGGPHNLVALANLHAMGIAPPKVAEARESNKPAPLILDDMGRTVDASGNE
VELTHRMPTLKANIRAVKREQFRQQLKEKPGEELESTIYFDGRVNIAPAQRAKKGFKFHE
QGRFEKIAQRIRTKAQLEKLQTEIAQAAKKTGIQASTKLALFAPKKMLGDGQVPIIEWWD
SYILPSNIDLSTDTNFVAMELFGVTNLVEHPAQISPPVDTDKPGVTLGVYLTKKEQKKLR
RQTRREGQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQK
AHEEANAARKLTTEQRKEKKVKKLKEDLSLGVHISVYRIRNLHNPAKKFKVEANANQLYL
TGTVVLHRDVNMVVVEGGPKAQKKFKRLMLSRIKWEEHNSKRDDPDADDETKKNNRCSLV
WEGTAKERNYGEIKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLESTDD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaaacgggaggtggaggagctgcggccctgggtggaacggaccgtgaag
aaggtgctgggtttctctgagcctactgtcgtcactgcggccctgcactgtgtaggcaag
ggcctggacaagaggaagaccacagaccagctgcgtccattcctggatgagtctgccggt
gggttcgtggagagactatttgaggccctggaggagagccgcaattcccgtgggaacaag
ggtgctggggagaggaaccgcaagagagacctgaaggatgtctttggtgatgaggtggaa
gtgggtgcgaggcgggacgtccctgaggcaggagatggtgtgccggtgaagaggaaacgt
gccccccgcttcgaggaggtggaggaaccagaggtcctacctgcaccccctactgagagc
cctggcatgctcactaagatacagatcaaacagatgatggaggctgccaccagacagata
gaggagaggaagaaacagctgagcttcgtcccagtgtcttcccagcagaggctgcccctg
cccactccccagccagaccctccttttgcctctcgttttctccctgctccctctgccccc
tcctcgggctcggcccagtccatcgctccctcccaggcagctactttcatgaacgatgcc
attgagaaggctaggaaggctgcagagctgcaggcccgcatccagtcgcagttagccatg
aagcctggtatactgggagccattgggagcactggaggacctcataacctggtggcgctg
gccaacctacacgccatggggatagcaccaccgaaggtggcggaggcccgtgagtcaaac
aagccggcccctctaattctggatgatatgggtcggaccgtggatgccagcggcaacgag
gtggagctaacacaccgcatgcccacgctcaaagctaatatccgtgcggtgaagagggag
cagttccgtcagcagttgaaggagaagcctggcgaggaactggagtccactatctacttt
gatgggcgtgttaacatagcacccgcccagcgagccaagaagggcttcaagttccacgaa
cagggacgctttgagaagatcgcccagaggatcagaactaaggcccagttggagaagctg
cagacagagatcgcccaggcagccaagaagacggggatccaggcctccaccaagctggcc
ctctttgcccccaagaagatgctgggggacgggcaggtgcccatcattgagtggtgggac
tcgtacatcctcccctccaacattgacctatccacagataccaattttgtggcgatggag
ttgtttggagtcacaaacctggtggagcaccctgctcagatcagccccccagtggacaca
gacaagccaggagtgaccctgggagtgtacctgactaagaaggaacagaagaagctgagg
agacagactcgcagggagggacagaaagagctacaggagaaggtccgactggggctcatg
ccccccccagaacctaaagtgcgcatctctaacctgatgagagtgctaggtacggaggca
gtacaggatcccactaaggtagaggcccacgtcagagcacagatggccaagagacagaag
gcccatgaggaggccaatgcagcccggaagctcacaaccgagcagagaaaagagaagaag
gtgaagaagctgaaagaggacctgagtcttggagttcacatctcagtctataggatccgt
aacctccacaacccggctaagaagtttaaagtggaagctaacgccaaccagctgtacctg
acgggcaccgtggtgctacaccgagacgtcaatatggtggtggtggagggaggtcccaaa
gcccagaagaagttcaagaggctcatgttgagcagaatcaaatgggaagaacacaactcc
aagagagatgatccagatgcagacgatgagaccaagaagaacaacagatgcagcctggtc
tgggagggcacggctaaggagcgtaactacggggagattaagtttaagcagtgtcctaca
gagaacatggctagagaacactttaagaagcacggaacagaacactactgggacctggct
ctgagccagagcgtgctggagagcactgatgactga
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