Salvelinus fontinalis (brook trout): 129837782
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Entry
129837782 CDS
T11136
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
sfon03015
mRNA surveillance pathway
sfon03040
Spliceosome
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129837782
09122 Translation
03013 Nucleocytoplasmic transport
129837782
03015 mRNA surveillance pathway
129837782
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129837782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129837782
03041 Spliceosome [BR:
sfon03041
]
129837782
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129837782
TREX complex
129837782
Spliceosome [BR:
sfon03041
]
Complex C
Other components
EJC/TREX
129837782
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129837782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
129837782
NCBI-ProteinID:
XP_055760203
LinkDB
All DBs
Position
3:complement(7853300..7856239)
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AA seq
272 aa
AA seq
DB search
MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGGSGGRPGGAGSGGRTGGSGPMRS
RQNFSGDRSDSRPTPYSRPRELPDKWQHDMFEGGFSSNAGGGGAGGGGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLDG
RAMSIQHVTSQIRDDNQRRPSQSSNGGSGGFNRDRIGRPNFSDRRGGGDRRAGRGSRGRG
RGGRGGVGKPQQLSAEELDAQLDAYNAKMETS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatggatatgtctttggatgacattattcaacaaagtaagaaaggcgga
ggtggccgcggaaatcgtggaggccgcagccgaggatcatcgggtcgaggtgggagtgga
ggccgacccggtggagctggctctggaggccggaccggcggatccgggcccatgaggagt
cgacagaacttcagtggagaccgaagtgacagcagacccacgccatacagcaggcccaga
gagctgccggacaaatggcaacacgacatgttcgaaggtggcttcagcagtaatgctggt
ggtgggggagcaggaggtggcggtgtggagactggcggcaagctccttgtctcaaacctt
gactttggtgtctctgacgctgatatccaggagttgtttgcggaattcggtacgttaaag
aaagcggctgtgcactatgaccggtctggccgcagccagggaaccgctgacgtccacttt
gagaggagggctgatgcactcaaagccatgaaacagtacaacaatgtaccactcgatggc
cgcgccatgagcattcagcatgtcacgtcacaaattcgagacgataaccagagaagacca
tcacagagttcaaacggaggcagtggtggattcaacagagacagaattggacgccccaat
ttctcagacaggcggggaggtggagacaggcgggccggcagaggctccaggggcaggggt
agaggcggacgtggtggtgtaggcaaaccgcagcagttgtctgctgaagagctggatgcc
cagttggatgcttacaatgctaagatggagaccagttag
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integrated database retrieval system
