Salvelinus fontinalis (brook trout): 129837845
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Entry
129837845 CDS
T11136
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129837845 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129837845 (trip13)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
129837845 (trip13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
Viral_helicase1
AAA_18
AAA_24
AAA_14
AAA_25
TIP49
NPHP3_N
AAA_5
NACHT
ATPase_2
RuvB_N
KAP_NTPase
RNA_helicase
AAA_28
TsaE
Cytidylate_kin
ATPase
ABC_tran
AAA_17
AAA_33
AAA_RNF213_4
bpMoxR
AAA_30
AAA_11
AAA_7
IstB_IS21
SLFN-g3_helicase
DUF815
Rad17
AAA_19
NB-ARC
DUF6393
Mg_chelatase
PduV-EutP
nSTAND1
AAA_3
NTPase_1
PhoH
Sigma54_activat
nSTAND6
Motif
Other DBs
NCBI-GeneID:
129837845
NCBI-ProteinID:
XP_055760288
LinkDB
All DBs
Position
38:complement(827587..834638)
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AA seq
425 aa
AA seq
DB search
MEGDRMEVGDLKQNPNDMNNIHVEVHVKSTSTAKRSDVKMHVLTLLNRHRMVFGAFRWTE
FDEDFLIKHVQSVAIVDAERKPIDLKSCSLSIHIFTLNDDGPSTLNLEEEELSAANHWLL
PAAEFHGIWESLVYDSGVKTQLLDYVSTTIYFSDKNVDSNLISWNRVVLLHGPPGTGKTS
LCKALAQKLSIRLSNRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKQALV
FVLIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLDQIKRHPNVVILTTSNVTEKIDL
AFVDRADIKQYIGPPSVEGIFNIYLSCLEELMKCQIVYPRQPLLTMFELETMGFRESKVS
ELSLVLRDIAIKSKGFSGRALRKLPFLAHALFVKTPTVALERFLEAMDLAVDKQIEERDD
LVNCL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacagaatggaggtaggggatctgaagcagaaccccaacgacatgaacaac
atccatgtggaggttcacgtcaaatctaccagcactgcgaagaggtctgacgtgaagatg
cacgtcttgaccctgctgaaccgtcatcgcatggtgttcggggccttcaggtggacagag
tttgacgaggacttccttatcaaacacgtccaatcagtggccatagtggatgctgagaga
aaacccatagatctgaagagctgcagtctgtccatccacatcttcaccctgaatgatgac
gggcccagcactctgaacctggaggaggaggagctctctgcagccaatcactggctctta
ccagccgctgagttccatggcatctgggagagtctggtgtatgacagcggggtcaaaaca
caactcttggattacgtctcaaccacaatttacttctcggacaaaaacgtggacagcaac
ctgatctcatggaaccgagttgtcctgcttcatggacccccgggcacagggaagacgtct
ttgtgtaaagctctggcccagaagctgtcaatcagactatcgaaccggtactcttatggg
cagtttgttgagatcaacagccacagtttgttctccaagtggttctctgagagtggtaaa
ctggtcactaagatgttccagaagatccaacagctgatagatgacaagcaggctctggtg
tttgttctcattgatgaggtggagagtctgacggcagcgcggaacgcctcccaggccgga
acggaaccctccgacgccatccgagtggtcaactctgtcctcacacagctggaccagatc
aagcggcatcctaatgttgtgatcctgaccacctccaacgtgacagagaagatagacctg
gcgtttgtggacagagctgacatcaagcagtacattggccctccgtctgtagagggcatc
ttcaacatctacctgtcctgcctggaggaactcatgaagtgccagatcgtgtaccccaga
cagccactgctgaccatgtttgagctggagaccatgggcttcagggagagcaaggtgtca
gagctcagcctggttctcagggacatcgccataaagagtaaaggttttagtggcagagcg
ctaaggaaactaccctttctggcccatgctctgtttgtgaagaccccgacagtggccctg
gagaggttcctggaggccatggacctagcagtggacaaacagatagaggagagggacgac
ctggtcaactgtctgtga
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