Salvelinus fontinalis (brook trout): 129837869
Help
Entry
129837869 CDS
T11136
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129837869 (tmc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfon02000
]
129837869 (tmc4)
03037 Cilium and associated proteins [BR:
sfon03037
]
129837869 (tmc4)
Transporters [BR:
sfon02000
]
Other transporters
Pores ion channels [TC:
1
]
129837869 (tmc4)
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129837869 (tmc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
129837869
NCBI-ProteinID:
XP_055760329
LinkDB
All DBs
Position
38:complement(6583022..6592326)
Genome browser
AA seq
701 aa
AA seq
DB search
MEFSELQRQSSTIAHGYHDAQQLARLRSKSVVSNQNGPQFNWGSPPSEGGEEGDSGPPKD
LRERPMTMRLKRAIREVQQMRVPVVTSWQSWKRSKAKSLSRFRADAGGVMSYVALWRKAL
HKIGGHFGGGVQSYFMFLRFLVVLNFLSFLLIAGFILIPSIVFRFTSTSNMTVDDTGPEV
CKVYDPNLQGLVVFYQYFLDLLSGTGFMEYSYMFYGYYNNTVAESSGFHYNLPLAYLLTS
VFYFAFCLICIITRMGSALRVAVATGSGAAGSYSKMVFTGWDYGCQGDRATKLKQKSIHY
QLQVDLEEERLQKKALSLTLGQTVGLCSLRIFLMLVSLALIGGAFFGIFKATVFSQAQVG
AEGILGLFWVYLPSIVITTGNFVVPLMCDQIALFERYSPSTTIIMALFRSVFLRMISLGV
LLFTLWSQITCFKDSPKCELCQYNNKEYPCWETRVGQEMYKLALFDFLITIAMLILVEFP
RRLFVDHYSCALTRWVGRQEFLVPPNVLGLVYGQTVVWTGALFCPLLPLINTLKFFILFY
CKKVTLFSNCRPAVKTFRSTTSTIFFLVVLLFGWGLALVAMIYSLAQIHPSMSCGPFRSL
TMMWSIVPNTFYTLSLTTQDFIFYMGSQAFSIPLFIFSCVVLCYVAALAAVYGKSVDLLK
AQFKLEGRDKQFLVKQIEELSREMGVPTRDQLDTFDTGAAN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagtgagctacaaagacagagctccactatagcccacggttaccatgatgcc
cagcagttggcgaggttacggagtaagtctgtagtgtccaatcagaatggccctcagttc
aactggggttctcccccatcggaggggggagaggagggtgactcgggaccccctaaggac
ctcagagagcggcctatgaccatgcgcctgaagagagcgatacgggaggtgcaacagatg
cgtgtgcctgtggtgactagctggcagtcgtggaaaaggagcaaggccaagtccctgagc
aggttcagagcagatgcagggggagtcatgtcctacgtagctctgtggagaaaggctctg
cataagataggaggccactttggcggtggtgtccagtcctacttcatgttcctgcgcttc
ctggtggtgctcaacttcctgtcgttcttgctgattgctgggttcatcctcatccccagt
atcgtgttcagattcaccagcaccagtaacatgacagtggacgacactggtccagaggtg
tgtaaggtctatgatccaaatcttcaaggtctggtggtgttttaccagtacttcctggac
ttactctctggaacgggtttcatggagtactcctacatgttctatggttactataacaac
accgtggcagagagcagtggcttccactacaacctgcccctggcctacctcctcacctcc
gtcttctacttcgccttctgtctcatctgcatcatcacacgcatggggagcgcacttcgc
gttgctgtggcaacaggcagcggtgctgccggcagttacagcaagatggtgttcactggc
tgggactacggttgccagggagaccgggccaccaaactcaaacagaaaagcatccactac
cagctacaggtggacctggaggaggagaggctacagaaaaaggctttgtctctaacctta
ggtcagacagtgggtctgtgttctctacgcatcttcctcatgctcgtctccctcgccctc
ataggaggagctttctttggcatcttcaaggctactgtcttcagccaggcacaggttgga
gcagagggcattctgggcctgttctgggtttaccttccttccatcgtcatcacaacagga
aactttgttgtgcctctcatgtgtgaccagatagccctgtttgagagatattctcctagt
accaccatcatcatggcactgttcaggtcagtgtttctgcgtatgataagtctgggagtg
ctgctgtttacactgtggagtcagatcacctgctttaaagacagtccaaaatgtgagctc
tgccagtacaacaacaaggaatatccgtgctgggagacgcgtgtgggacaggagatgtac
aaactggccttgtttgacttcctcattaccatcgccatgcttatcctggtggagtttcca
cgcaggttgtttgtggaccactactcctgtgcactgacccggtgggtaggtcgtcaggag
ttcttggtgcctcccaatgtgctgggtctggtctacggtcagacagtggtgtggaccgga
gctctgttctgccctctgctgcctctcatcaacacactcaagttcttcatcctcttctac
tgcaagaaggtcactctgttttctaactgtcgtccggcggtgaagacgttccgctccacc
acctccaccatcttcttcctggtggtgttgctgttcggctggggcctcgccctcgtcgcc
atgatctacagcctggcccagatccatccctctatgagctgtggtccgttccgctctctc
actatgatgtggagtatcgttcccaacaccttctacactctctccctgacaacacaagac
ttcatcttctacatgggctcccaggccttctccatccctctcttcatcttctcctgtgtg
gtgctgtgttacgtagcagctctagccgcagtctatgggaagagtgttgatctgctaaag
gcccagtttaaactggagggacgtgataagcagttcctggtcaagcagattgaagagctg
agtagagagatgggggttccaacaagggaccaattggacacatttgacactggtgcagca
aactga
DBGET
integrated database retrieval system
