Salvelinus fontinalis (brook trout): 129838013
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Entry
129838013 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
sfon04137
Mitophagy - animal
sfon04144
Endocytosis
sfon04340
Hedgehog signaling pathway
sfon04350
TGF-beta signaling pathway
sfon04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129838013
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129838013
04350 TGF-beta signaling pathway
129838013
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129838013
04137 Mitophagy - animal
129838013
09144 Cellular community - eukaryotes
04520 Adherens junction
129838013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129838013
04121 Ubiquitin system [BR:
sfon04121
]
129838013
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129838013
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129838013
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129838013
Autophagy
Mitophagy
Other mitophagy associated proteins
129838013
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
HECT type E3
129838013
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129838013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129838013
NCBI-ProteinID:
XP_055760630
LinkDB
All DBs
Position
3:complement(8960738..9033060)
Genome browser
AA seq
798 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLSKKDFFLVNTILHFGSSSTGLPDPFAKVVVDGSGQC
HSTDTVRNTLDPKWNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRL
KDTGYQRLDLNKLGPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERR
TASGRIQYLNHITRTTQWERPTRPASEYSSPTGRPLSCVVDENTPVMTPNGAAIGVLPSS
GSDPRVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDP
RVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPNG
PGPNGSRVAMESQSQSQNTNLSSRQSNQLKEQQPPPQVPVLSPAQLPEEAECLTVPKYKR
DLVQKLKILRQELSNQQPQAGHCRIEVCREEIFEESYRQVMKMRPKDLWKRLMVKFRGEE
GLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIM
GMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFC
VEHNAYGEIIQHELKPNGKTVSVSEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIP
QHLLKSFDEKELELIVCGLGKIDIADWKSNTRLKHCTTDSNVVKWFWKAVESYDEERRAR
LLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDANTNNLPKAHTCFNRIDVPAYEHYDK
LYDKLLTAIEETCGFAVE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttaggagaaatggcccagtgaaactgcggttgacagtgctgtgt
gcgaagaacttgtcaaagaaagacttcttccttgtgaatacaatcctccattttggctcc
tcctccacagggctgcctgacccctttgccaaagtggtggtggacggctcggggcaatgc
cactccacggacaccgtgaggaacacgctggaccccaagtggaaccaacattacgacctg
tacattgggaagtctgactccatcaccatcagtgtgtggaaccacaagaagattcacaag
aagcagggggccggcttcctgggctgtgtacgccttctctccaacgccatcaaccgcctc
aaagacaccggttatcagagactggacctgaacaagctgggccccaatgacaacgacaca
gtgagaggccagatagttgtgagtctacagtccagagaccgtatcggcacaggaggcccc
gtggtggactgcagccgtctgtttgataatgatttacctgatggctgggaggagcggaga
acagcctctggtcggatccagtaccttaatcacatcacacgcaccacgcaatgggagagg
cccacccggccggcgtctgagtactccagccccaccgggcggccccttagctgtgtggtg
gatgagaacacgccggtcatgacacccaacggggcggccatcggtgtgctgcccagcagt
ggcagtgacccgcgggtccaagagagacgcgtccgctcccagagacacaggaactacatg
agcaggacccacctccacaccccgccggacctgccagagggatatgagcaaagaaccacg
cagcagggccaggtgtacttcctccacacccagacgggcgtcagcacatggcacgaccct
cgagtgcccagggatctgagcaacgtcaactgtgaggagctgggtcctctgccgccgggc
tgggagatccgcaacacggcaacgggacgcgtctactttgtggaccacaacaaccgaacc
acgcagttcaccgacccgcgcctctccgccaacctccacctggtcctcaatccaaacggc
cctggtccaaacggttcccgcgtggccatggagagccagagccagagccagaacactaac
ctcagtagtcgtcagtcgaaccagttgaaggagcagcagccccccccgcaggtcccggtg
ttgtccccggcccagctccccgaggaggccgagtgcctcaccgtgcccaagtacaagagg
gacctggtccagaagctcaagatcctccggcaggagctgtccaatcagcagccccaggca
ggacactgtcgcatcgaggtctgccgcgaggagatctttgaggagtcgtaccgtcaggtg
atgaagatgcgtcccaaggacctgtggaagagattgatggtcaagttcagaggagaggag
ggcctggactacggaggagtggccagggagtggctgtacctgctgtcccatgagatgttg
aacccctactacggcctgttccagtactccagagacgacatctacaccctgcagatcaac
ccagacagcgccgtcaacccggagcacctgtcctatttccattttgtgggtcgtatcatg
ggcatggcggtgttccacggccactacatagacgggggcttcaccctgcccttctacaaa
cagctgctggggaaacccatcaccctggacgacatggagtcagtggacccagacctccac
aacagcctggtctggatcctggacaatgacatcacgggggtgctggaccatacgttctgt
gtggagcacaatgcctacggagagatcatccagcacgaactgaagcccaacggcaagact
gtctctgtctccgaggacaccaagaaggagtatgtcaggctgtatgtgaactggaggttc
ctccacggcatcgaggctcagttcctggccctgcagaagggcttcaacgaggtcatcccc
cagcacctgctcaagtcctttgacgagaaggaactagagttgatagtgtgtggcctgggg
aagatcgacatagcagactggaagagcaacacgcgcctgaagcactgcaccacggacagc
aacgtggtcaagtggttctggaaggccgtggagtcctacgacgaggagaggagggccaga
ctgctgcagtttgttaccgggtcatctagagtcccactgcagggattcaaggctttacaa
ggtgccgcggggccaaggctcttcaccatccaccagatcgatgccaacaccaacaatcta
cccaaagcccacacctgctttaaccggattgacgttcccgcctacgagcactatgacaag
ctgtacgacaagctgctgacagccatcgaggagacgtgtggctttgcggtggaatga
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