Salvelinus fontinalis (brook trout): 129838132
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Entry
129838132 CDS
T11136
Name
(RefSeq) testis-expressed protein 10 homolog
KO
K14827
pre-rRNA-processing protein IPI1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129838132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfon03009
]
129838132
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
129838132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
HEAT_EF3_N
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
129838132
NCBI-ProteinID:
XP_055760848
LinkDB
All DBs
Position
38:8040541..8073133
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AA seq
918 aa
AA seq
DB search
MTKCKKKKRQDDFQKVKLKVGKTKPKADNATNINFRTKGINLTEQLKKDANAPTTHRKLN
IKDLLSQLHHYSGTVKQGALVGLRELLTLHPSELDQHLSSLLSEAAAVFTDKDPNVRMSA
TRLLRFIAQSVPAERTSPFFPLLSAHLSCAMTHIETGIQEDALKVLDVLLDHYPALLAAR
PTLLLTNFLELISHKSPGGGARKGLEGKGRSWALSVNPNRNVTGQQWRLTVLLRLGRFLQ
AVVEERRAEEGVACVSGDMFSVLNGQGGANAPLELNWEELTYRKDGFQVFEHSGAMPTPH
STFKLRPETEPGAGVSEGLGTGESVRGFASTLVPLLLDVWVEASASDRSKTDSAHLLTPD
AMSLMYQVLSILQLLRKLAPQREHQDTLDAWFRSEYLGDFKQHFMKNFPYGNLDTPKQRR
KTDPKRSKQAPTIPGQTVEPLALNVLLCQVMVSMVTLSQREGQAQEPDAEWLMPLRGFVQ
ETLSSGAKLSQRHLHTLLETVWRMVITQRSRAVTEDLLQAVYVQYQQMNLNLQTRTLLLS
FYSRLYLQEHNHTHIARSRVLSRWLAALPLQLSQLGHRNPALSDRLLLSIQAAASRGNKA
LLNSLHTHACRLYDPQEGSVVLLPAESQQRLVQLLYFLPVMSQGLLANLSRCCTAGRVSA
GLAASLIRIIHLRSSLSGWSVGSQDTTLRDVDYISFLFSTLTGFSSDELATLQEAGDESV
LPPSPLSPLSLYPTPLEQFTHHWDVVEEVCHCLETLGSRSQCFDVLQNGICKNLTGLAVV
PDSMAAGLLRAVARLLDLSFLPSEPLLRFLSRCCLSLLSLLLTLQQDTASENNHKREAVW
GACVAALSSIPRLLRLVLQSLRVRDLCEEELPQLAQILSLLLQHTALRNHMLANATLLQH
IIQDLTVNTHSATQPHAG
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtgcaagaagaagaagaggcaggatgacttccagaaggtcaagctgaaggtg
gggaagaccaagcctaaagcggacaatgccaccaacatcaacttccgcaccaagggaata
aacctaactgaacagctgaagaaagatgctaatgcacccaccacacaccggaagctcaac
atcaaggacctgttgtcccagctgcatcactacagtggtacagtgaaacagggagctctt
gtgggactgagggagctgctgacccttcacccctcagagttagaccaacacctctccagt
ctgctcagcgaggctgctgccgtcttcacagacaaggacccgaatgtacggatgtctgcc
acacgcctgctcaggttcatagcccagagtgtgccagcggagcggacatctccattcttc
cctctcctctctgcccacctctcctgtgccatgacccacatcgagacgggtatccaggag
gatgccctgaaggtcctcgacgttttgctggaccactatcctgccctgctggctgctcgt
cccaccctgctgctcaccaacttcctggagctgatctcacacaaaagtcccgggggcggg
gcaaggaaggggctggaggggaaggggaggagctgggccctgtcagtcaaccctaacagg
aacgtgactggtcagcagtggagactcacagtgctgctcagactggggcgttttcttcag
gcggtagttgaggagaggcgagcggaggagggggttgcatgtgtctcaggtgacatgttc
agtgttttgaatggacaaggaggagctaatgcacctttggagctcaactgggaggagctt
acctacagaaaagacggatttcaggtgtttgaacattcaggagccatgcccactccgcac
tccaccttcaaactcaggccggagactgagcctggggctggggtgagtgaggggctgggc
acaggggagtctgtacggggctttgcctccaccctggtgccccttctactagatgtctgg
gtagaggctagtgccagcgaccggagcaagactgacagtgctcatctcctcacccccgac
gccatgtcactgatgtaccaggtcctctccatactacagctgctacgcaagctggcacca
cagagagaacaccaggatacactggatgcgtggtttcgcagtgagtacctgggggatttt
aagcagcacttcatgaagaacttcccctatggaaatctggacacccctaaacaaaggcgg
aagacagaccccaagaggagtaagcaggcccctacaatcccagggcagacagtggaaccc
ttggctctgaacgtgctgctctgccaggtcatggtttccatggttaccctcagccagagg
gaggggcaagcccaggagcccgatgctgagtggctgatgcctctgagagggtttgtccaa
gagactctgtccagtggggccaagctgagccaaagacatctacatacactcctggagact
gtctggagaatggtcatcacacaacgcagcagggcggtgacggaggatctgttacaggcg
gtgtatgttcagtaccagcagatgaacctgaatctgcagaccagaacactgctactttcc
ttctacagcagactgtacctacaggaacacaaccacacacatatcgccaggagtagagtg
ttgtctcggtggctggctgctctaccgctccagttgtcccagctaggccaccgtaaccct
gccctctcagacaggctcctgctctccatccaggctgctgcctcccgcgggaacaaggct
ctgctgaactccctacacacgcatgcatgcaggctctacgacccacaggagggcagtgtg
gtattgttaccggctgagtctcagcagcgattggtccagctactctacttcctgcctgtg
atgtcacagggtctattggccaatctgagtcgctgctgcactgcgggacgcgtctctgct
ggcctggctgcctccctcatacgcatcatacacctcaggtcctctttgagtggctggtca
gtagggtctcaggacacaaccctgcgtgatgttgactacatcagcttcctgttctccacc
ctcacagggttttcgtctgatgagctggccaccctgcaggaggctggggatgagagcgtg
ctccctccctcccccctctcccccctcagcctctaccccacccccctggagcaattcaca
caccactgggacgtggtggaggaagtgtgccactgcttggagacgctggggtctcgttca
cagtgctttgatgtgctgcagaacggcatctgcaagaacctgactggtctggctgtggta
ccagacagtatggcagcagggttgttgagagcggtggccagactgttggacctgtccttc
ctccccagtgaacctctgctgaggttcctgtcccgctgctgcctcagcctactttctctg
ctactgaccctacagcaggacaccgcctcagagaacaaccacaagagggaggcagtgtgg
ggtgcgtgtgtggcagcgctgagcagcattccccggctgttgcggttggttctgcagtcg
ttgcgagttagggacctgtgtgaggaggagctgcctcagctggcccagatactgtccctg
ctgctgcagcacacagcgctacgcaaccacatgctggctaacgcaactctactacaacac
attatacaggacctcacggtaaacacacacagcgctacgcaaccacatgctggctaa
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