Salvelinus fontinalis (brook trout): 129838160
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Entry
129838160 CDS
T11136
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129838160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129838160
03021 Transcription machinery [BR:
sfon03021
]
129838160
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129838160
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
129838160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
POU2F1_C
HTH_31
Motif
Other DBs
NCBI-GeneID:
129838160
NCBI-ProteinID:
XP_055760898
LinkDB
All DBs
Position
38:complement(10456335..10475415)
Genome browser
AA seq
711 aa
AA seq
DB search
MSKPVEVENTVADSPMESTDSERNGPDSNHQLQQMKISPFHLSPTLSSNKNKMEECGEMS
PGPPPHHSHAPSQTPLPHTQLMLTGSQLAGLTALLPAQQQLLLQQAQAQLLAAAVQQSVQ
QSNAAHAAHAAHAAHAAAQANQQAQAAAAANQHAQQQQAGQTGQQGQSQPQGQSTQEQTG
QPVPVPPTHPQLTLSQPIQLTAQDIQQLLQLQQLVLVPGHHLQSPQFLLQQHQGQQGLLS
TPNLIQLPQQNQGSLLSAPTRLGLQAQRDKAMEGSGVMTSVSSVTSHPEEPSDLEELEVF
ARTFKQRRIKLGFTQGDVGMAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLN
DAETMSTDSTMPSPSSLSSSSMGFEGLPGRRRKKRTSIETNVRVALERAFITNQKPTSEE
ILCIADQLSMEKEVIRVWFCNRRQKEKRINPNSATPPLPSQLPQAPPTHKPPCYSPHMMS
SQLSSQLSSQLSQAVTSLSTTLTTMSSFSPLIPSGPTHSSLSSASSPVTPPPPCSTASPA
PPSHSTLSLNTGLWRLGKKNGDMSNYITDFAANLRNSVMGVNTGNQALNQALLSNNTLAT
IQALAASGGQLPLSSLEGGSKVLLGGAGGQGGGLQSSFFLNHPAFLHMGQNPGAGLVSAA
VAKASQPSPFPFTSSISPTPCSPSPCSSPASSCDYDELAHSPSSLGGAKIE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagccagttgaggttgagaacacagtggctgactctccaatggagagcacagat
tcagagcggaatggtcctgactcaaatcatcagcttcagcagatgaaaatcagtcccttt
cacctttctccaaccctcagcagcaacaagaataagatggaagagtgtggtgagatgtcc
ccgggccctcctccccaccacagccacgccccgtcacagacgcccctcccacacacacag
ctcatgctgaccggctcccaactggcagggttgacagctctcttgccagcgcagcagcag
ttgttactgcagcaggctcaggctcagcttctagctgcagctgtgcagcagtctgttcag
cagtccaatgcagctcacgcagctcacgcagcccacgcagcccacgcagccgcccaagcc
aatcagcaagctcaggcagccgcagcagccaatcaacatgcccagcagcagcaggcggga
cagacagggcagcagggccaatcacagccccagggacagagcacacaggaacagacaggt
caacctgtccctgtcccgcccactcatccccagctcactctctctcagccaattcagctc
accgcccaggacatccagcagttgttgcagctgcagcagttggttctggtgccaggacac
cacctgcagtctcctcagttcctcctccaacagcaccaagggcagcaaggactgctatca
acaccaaatctgattcagctacctcagcaaaaccaagggagcctcctgtccgctcccacc
aggctggggctccaagcacagagagataaggctatggagggcagtggggtcatgacctct
gtgtcctctgtgacctctcaccctgaggagcccagtgacctggaggaactggaggtgttc
gcccgcaccttcaaacagagacgcatcaaactgggctttacacagggtgacgtgggaatg
gccatggggaagctatatgggaatgatttcagccagaccaccatctctcgcttcgaggcc
ctcaacctgagctttaagaacatgtgcaaactcaaaccactactggagaagtggctcaat
gatgcagagaccatgtccacagacagtactatgcccagccccagctctctgtcctcttcc
tcgatgggcttcgagggcctgccgggccgacgcaggaagaagagaaccagcatcgagact
aacgtccgcgtggccctggagagagccttcattacgaaccagaagcctacctcagaggag
atcctgtgtatcgcggaccagctcagcatggagaaggaggtgatccgcgtgtggttctgc
aaccgccgccagaaagagaagcgtatcaaccccaacagtgccacccctcccttgcccagc
cagctcccccaagccccaccgacacacaaacccccctgctacagcccacacatgatgtcc
agtcagctgtccagtcagctgtccagtcagctgtcccaggcagtgaccagcctcagtacc
acattgaccacaatgtcatcgttctccccactgatccccagtggtcccacccactcatct
ctcagctccgcctcctctccagtgactcctcctccaccttgcagtacagccagcccagcc
cctcccagccacagcacactgagtctcaacacaggcttatggcgtttgggtaaaaagaat
ggtgacatgtctaactacatcaccgattttgctgcaaacttgaggaacagtgtgatggga
gtaaacacagggaaccaggctctgaaccaagctctcctcagcaacaacactctggctact
atacaagccctagcagccagtggtggccagctgcccctttccagtcttgaggggggcagt
aaggtgttgctgggtggtgcaggggggcagggagggggtctccagtcctcctttttcctc
aaccaccccgctttcctccacatgggccagaatcctggtgctggattggtcagcgctgcc
gtagccaaagcatcccagccctcccctttccccttcaccagtagcataagccccaccccc
tgctccccctccccttgctccagccccgcctcttcctgcgactacgatgaattggcgcac
agcccatcctcattgggaggggctaagattgagtga
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