Salvelinus fontinalis (brook trout): 129838212
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Entry
129838212 CDS
T11136
Name
(RefSeq) ATP-dependent DNA helicase Q1-like isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129838212
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129838212
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
129838212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
wHTH-PRTase_assc
Cas3-like_C_2
P22_Tail-4
Motif
Other DBs
NCBI-GeneID:
129838212
NCBI-ProteinID:
XP_055760958
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All DBs
Position
39:19356822..19376978
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AA seq
628 aa
AA seq
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MDSTKDVQAELDSVEAKLEVVELQIAELLKKQASLTSKKKQLLGRLEEPCDSTQPSGPAM
TKQELLRYEKDDFSWSTKLEQNLKDVFQLSKFRPLQLKAINLSMSGKDLFLVMPTGRGKS
LCYQLPAVCSEGFTLVVTPLVSLMEDQLMYLKSIDVEAVSLNASSSKEHAKMVLAEMTDT
KAPFKLLYVTPEKIAKSKLLMSRLEKAYNAGRLSRIAVDEVHCCSQWGHDFRPDYKLLGI
LKRQFPKVPLLGLTATATSSVLKDCQKILCVPEPITLTASFNRTNLYYEVRLKDSNSDDS
ISDISTLIKERYKDQSGIVYVFSQKDAETVSADLQKKGLNASPYHANMSPEDKSQVHRKW
ATNKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAGRDDKPADCIVYFGF
NDIFRISTMVVMENVGQQKLLTMVDYCQNVDRCRRSVIAVHFDEVWNDEGCNEMCDVCRH
GNDYITVDITQHAKDLVQIVELAGSLDEKLTPLKVTEAWMGKGPAKRRKMIQTTTLSRLE
VEAIITSLLLQGYLSEDFSFTPYTTYFYLKLGRKAPLLKNQSHSITMKMRRTGLDANTVK
VSQVKTKGKRSGDNAANSPVTKKVKKDL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggacagtaccaaagacgtgcaggcagagctggactctgtggaggccaagctggaggtg
gtggagctgcagatagctgagctgctgaagaagcaggctagcctgacctccaagaagaaa
cagctgctcggcaggctggaagagccatgtgactccacccagccctctggacctgcaatg
accaagcaggagctgctgcgctatgagaaggatgatttctcgtggtcaacaaagctggag
cagaatctgaaggacgtgttccagctctctaagttccgtcctctccagctgaaggccatc
aaccttagtatgtctggtaaagacctcttcctagtgatgccgactggacgagggaaaagc
ctctgctatcagctacctgcagtctgctctgagggtttcactctggtagtaactcctcta
gtttctctgatggaggatcagctcatgtacttaaagtccatcgacgttgaagccgtctct
ctcaacgcatccagcagtaaggagcatgctaaaatggtcctagctgagatgacggacacc
aaagcgcctttcaagctgctgtatgtgactccggagaagatcgcgaagagcaagctgctg
atgtcgaggctggagaaggcctacaatgcaggcaggcttagccgtattgctgtggacgag
gtgcactgctgcagccagtggggacatgacttcagacctgactacaagctcctggggatc
ctgaagaggcaattcccaaaggtgccgttgctagggctgacggccacggcaaccagcagt
gttctaaaggactgtcagaagatcctgtgtgtccctgagccaatcacactcaccgcctcc
ttcaaccgcaccaacctctactacgaggtacgccttaaagactcgaacagtgatgattca
atcagtgacatctccacactgatcaaggagcgatataaggaccagtcagggatagtgtac
gtgttttcccagaaggatgcagagacggtgtcagcagacctacagaagaaaggcctcaat
gcatctccataccacgctaacatgagtccagaggacaagtcacaggttcatcgcaaatgg
gccaccaacaagatccaggtggtggtagctactgtggcgttcgggatggggatcgacaag
gctgatgtcagatttgtcatccatcacaccatcagcaagtccatagagaactactatcag
gagagcggacgagcaggcagagacgataagccggctgactgcattgtgtactttggcttc
aacgacatcttcaggatcagcaccatggttgtcatggagaacgtaggccaacagaagctg
ctgaccatggtcgactactgtcagaatgtagacaggtgtcggcgctcagtgatcgctgtt
cactttgatgaggtttggaacgatgaaggatgcaacgagatgtgtgacgtctgtcgccat
ggcaatgactacatcacagtggacatcacgcagcatgctaaagatctggtccagattgtg
gagctggcgggctctctggatgagaaactgacccccctgaaggtgaccgaggcgtggatg
gggaagggtccggccaaacgcaggaagatgatccagaccaccaccctgtctcgcctggag
gtggaggccatcatcacaagcctactgctgcagggctacctcagtgaagacttcagtttc
actccgtacaccacctacttctacctgaagctgggtcgtaaggcaccactgctgaagaac
cagagtcactccatcaccatgaagatgaggaggacaggcctggacgccaacacggtaaaa
gtgtcccaggtaaagaccaaaggaaagagatctggtgacaatgctgcaaactcccctgtc
accaagaaagtcaagaaagacctctag
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